RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
PSPC1-201ENST00000338910 KRTAP10-8P60410 259 aa10.09□□□□□ -0.79
PSPC1-201ENST00000338910 ROMO1P60602 79 aa10.09□□□□□ -0.79
PSPC1-201ENST00000338910 A0A1B0GU33 70 aa10.09□□□□□ -0.79
PSPC1-201ENST00000338910 FAT3Q8TDW7 4589 aa10.08□□□□□ -0.8
PSPC1-201ENST00000338910 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
PSPC1-201ENST00000338910 H1FX-AS1Q4G0G2 97 aa10.04□□□□□ -0.8
PSPC1-201ENST00000338910 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
PSPC1-201ENST00000338910 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
PSPC1-201ENST00000338910 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
PSPC1-201ENST00000338910 A0A0A0MQY5 61 aa9.92□□□□□ -0.82
PSPC1-201ENST00000338910 KRTAP4-5Q9BYR2 181 aa9.87□□□□□ -0.83
PSPC1-201ENST00000338910 K7ERS5 55 aa9.85□□□□□ -0.83
PSPC1-201ENST00000338910 COX6B2Q6YFQ2 88 aa9.85□□□□□ -0.83
PSPC1-201ENST00000338910 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
PSPC1-201ENST00000338910 ABCA13Q86UQ4 5058 aa9.76□□□□□ -0.85
PSPC1-201ENST00000338910 P0C880 135 aa9.74□□□□□ -0.85
PSPC1-201ENST00000338910 XP32Q5T750 250 aa9.71□□□□□ -0.86
PSPC1-201ENST00000338910 RPL37P61927 97 aaKnown RBP9.68□□□□□ -0.86
PSPC1-201ENST00000338910 HERC2O95714 4834 aa9.66□□□□□ -0.86
PSPC1-201ENST00000338910 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.86
PSPC1-201ENST00000338910 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
PSPC1-201ENST00000338910 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
PSPC1-201ENST00000338910 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
PSPC1-201ENST00000338910 LPAP08519 4548 aa9.58□□□□□ -0.88
PSPC1-201ENST00000338910 LRP2P98164 4655 aa9.58□□□□□ -0.88
PSPC1-201ENST00000338910 TPRXLQ17RH7 258 aa9.57□□□□□ -0.88
PSPC1-201ENST00000338910 KRTAP3-2Q9BYR7 98 aa9.54□□□□□ -0.88
PSPC1-201ENST00000338910 A0A0D9SG42 100 aa9.54□□□□□ -0.88
PSPC1-201ENST00000338910 J3QL48 77 aa9.5□□□□□ -0.89
PSPC1-201ENST00000338910 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
PSPC1-201ENST00000338910 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
PSPC1-201ENST00000338910 NDUFAF8A1L188 74 aa9.38□□□□□ -0.91
PSPC1-201ENST00000338910 S4R3F8 94 aa9.38□□□□□ -0.91
PSPC1-201ENST00000338910 PCLOQ9Y6V0 5065 aa9.38□□□□□ -0.91
PSPC1-201ENST00000338910 KRTAP15-1Q3LI76 137 aa9.35□□□□□ -0.91
PSPC1-201ENST00000338910 KRTAP12-2P59991 146 aa9.33□□□□□ -0.92
PSPC1-201ENST00000338910 HERC1Q15751 4861 aa9.25□□□□□ -0.93
PSPC1-201ENST00000338910 KRTAP12-1P59990 96 aa9.24□□□□□ -0.93
PSPC1-201ENST00000338910 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
PSPC1-201ENST00000338910 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
PSPC1-201ENST00000338910 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
PSPC1-201ENST00000338910 MUC2Q02817 5179 aa9.09□□□□□ -0.95
PSPC1-201ENST00000338910 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.96
PSPC1-201ENST00000338910 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
PSPC1-201ENST00000338910 M0QZ58 72 aa9.05□□□□□ -0.96
PSPC1-201ENST00000338910 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
PSPC1-201ENST00000338910 UBR4Q5T4S7 5183 aa8.79□□□□□ -1
PSPC1-201ENST00000338910 R4GN34 69 aa8.73□□□□□ -1.01
PSPC1-201ENST00000338910 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
PSPC1-201ENST00000338910 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
PSPC1-201ENST00000338910 FLGP20930 4061 aaPredicted RBP8.68□□□□□ -1.02
PSPC1-201ENST00000338910 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
PSPC1-201ENST00000338910 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
PSPC1-201ENST00000338910 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
PSPC1-201ENST00000338910 PP632Q6XCG6 107 aa8.46□□□□□ -1.05
PSPC1-201ENST00000338910 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
PSPC1-201ENST00000338910 MT1HP80294 61 aa8.34□□□□□ -1.07
PSPC1-201ENST00000338910 M0R2T5 61 aa8.32□□□□□ -1.08
PSPC1-201ENST00000338910 SPRR5A0A1B0GTR4 108 aa8.11□□□□□ -1.11
PSPC1-201ENST00000338910 KRTAP23-1A1A580 65 aa8.1□□□□□ -1.11
PSPC1-201ENST00000338910 TNP1P09430 55 aa8.08□□□□□ -1.12
PSPC1-201ENST00000338910 MT2AP02795 61 aa8.07□□□□□ -1.12
PSPC1-201ENST00000338910 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
PSPC1-201ENST00000338910 MT1FP04733 61 aa8.05□□□□□ -1.12
PSPC1-201ENST00000338910 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
PSPC1-201ENST00000338910 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
PSPC1-201ENST00000338910 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
PSPC1-201ENST00000338910 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
PSPC1-201ENST00000338910 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
PSPC1-201ENST00000338910 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
PSPC1-201ENST00000338910 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
PSPC1-201ENST00000338910 INE1O15225 51 aa7.7□□□□□ -1.18
PSPC1-201ENST00000338910 MT1BP07438 61 aa7.66□□□□□ -1.18
PSPC1-201ENST00000338910 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
PSPC1-201ENST00000338910 USH2AO75445 5202 aa7.56□□□□□ -1.2
PSPC1-201ENST00000338910 LCE2BO14633 110 aa7.54□□□□□ -1.2
PSPC1-201ENST00000338910 KRTAP10-5P60370 271 aa7.52□□□□□ -1.21
PSPC1-201ENST00000338910 MT1XP80297 61 aa7.51□□□□□ -1.21
PSPC1-201ENST00000338910 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
PSPC1-201ENST00000338910 KRTAP10-7P60409 375 aaPredicted RBP7.29□□□□□ -1.24
PSPC1-201ENST00000338910 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
PSPC1-201ENST00000338910 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
PSPC1-201ENST00000338910 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
PSPC1-201ENST00000338910 SSPOA2VEC9 5147 aa7.15□□□□□ -1.27
PSPC1-201ENST00000338910 KMT2DO14686 5537 aa7.11□□□□□ -1.27
PSPC1-201ENST00000338910 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
PSPC1-201ENST00000338910 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
PSPC1-201ENST00000338910 KRTAP19-6Q3LI70 58 aa6.92□□□□□ -1.3
PSPC1-201ENST00000338910 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
PSPC1-201ENST00000338910 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.31
PSPC1-201ENST00000338910 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
PSPC1-201ENST00000338910 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
PSPC1-201ENST00000338910 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
PSPC1-201ENST00000338910 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
PSPC1-201ENST00000338910 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
PSPC1-201ENST00000338910 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.35
PSPC1-201ENST00000338910 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
PSPC1-201ENST00000338910 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
PSPC1-201ENST00000338910 MT1EP04732 61 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms