RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 TEX15Q9BXT5 2789 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 KALRNO60229 2985 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 DMXL2Q8TDJ6 3036 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 KMT2CQ8NEZ4 4911 aaKnown RBP0.02□□□□□ -2.41
XRCC4-202ENST00000338635 WDR87Q6ZQQ6 2873 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 FAM186AA6NE01 2351 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 KIAA1109Q2LD37 5005 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 MYO9AB2RTY4 2548 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 EPPK1P58107 5090 aaKnown RBP0.02□□□□□ -2.41
XRCC4-202ENST00000338635 A8MTW9 85 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 TNP1P09430 55 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 LOC400499M0QZD8 3231 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 APOBP04114 4563 aaKnown RBP0.02□□□□□ -2.41
XRCC4-202ENST00000338635 CENPEQ02224 2701 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 HERC1Q15751 4861 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 MXRA5Q9NR99 2828 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 ANK3Q12955 4377 aaKnown RBP0.01□□□□□ -2.41
XRCC4-202ENST00000338635 LAMA1P25391 3075 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 ACACAQ13085 2346 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 TLN1Q9Y490 2541 aaKnown RBP0.01□□□□□ -2.41
XRCC4-202ENST00000338635 UTP20O75691 2785 aaKnown RBP0.01□□□□□ -2.41
XRCC4-202ENST00000338635 DNAH3Q8TD57 4116 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 EP400Q96L91 3159 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 MUC3AQ02505 3323 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 RYR1P21817 5038 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 TLN2Q9Y4G6 2542 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 DEFB131AP59861 70 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 USH2AO75445 5202 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 LRBAP50851 2863 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 C5orf42Q9H799 3197 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 SZT2Q5T011 3432 aa0.01□□□□□ -2.41
XRCC4-202ENST00000338635 DDX60Q8IY21 1712 aaKnown RBP0.01□□□□□ -2.41
XRCC4-202ENST00000338635 PKHD1L1Q86WI1 4243 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 RYR2Q92736 4967 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 UNC80Q8N2C7 3258 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 LAMA3Q16787 3333 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 M0QZ58 72 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 MGAQ8IWI9 3026 aa0□□□□□ -2.41
XRCC4-202ENST00000338635 FAM208AQ9UK61 1670 aaKnown RBP0□□□□□ -2.41
XRCC4-202ENST00000338635 FREM2Q5SZK8 3169 aa-0□□□□□ -2.41
XRCC4-202ENST00000338635 EYSQ5T1H1 3165 aa-0□□□□□ -2.41
XRCC4-202ENST00000338635 BOD1L1Q8NFC6 3051 aa-0□□□□□ -2.41
XRCC4-202ENST00000338635 CRYBG3Q68DQ2 2970 aa-0□□□□□ -2.41
XRCC4-202ENST00000338635 CHD7Q9P2D1 2997 aa-0□□□□□ -2.41
XRCC4-202ENST00000338635 NBPF19A0A087WUL8 3843 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 SPENQ96T58 3664 aaKnown RBP-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 CELSR3Q9NYQ7 3312 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 PRUNE2Q8WUY3 3088 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 CFAP54Q96N23 3096 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 TOMM5Q8N4H5 51 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 SPRR2FQ96RM1 72 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 DNAH11Q96DT5 4516 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 CEP250Q9BV73 2442 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 CEP350Q5VT06 3117 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 DNAH2Q9P225 4427 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 VPS13DQ5THJ4 4388 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 MYO15AQ9UKN7 3530 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 RYR3Q15413 4870 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 RELNP78509 3460 aa-0.01□□□□□ -2.41
XRCC4-202ENST00000338635 GOLGB1Q14789 3259 aaKnown RBP-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 FAT1Q14517 4588 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 FRYQ5TBA9 3013 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 ZFHX4Q86UP3 3567 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 CSMD1Q96PZ7 3565 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 IQGAP1P46940 1657 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 ATMQ13315 3056 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 VCANP13611 3396 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 MKI67P46013 3256 aaKnown RBP-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 RANBP2P49792 3224 aaKnown RBP-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 CSMD2Q7Z408 3487 aa-0.02□□□□□ -2.41
XRCC4-202ENST00000338635 SRCAPQ6ZRS2 3230 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 SPTBN5Q9NRC6 3674 aaKnown RBP-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 SPTAN1Q13813 2472 aaKnown RBP-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 DNAH6Q9C0G6 4158 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 LAMA5O15230 3695 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 PCNTO95613 3336 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 DNAH14Q0VDD8 3507 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 MT4P47944 62 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 DNAH12Q6ZR08 3092 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 TRPM2O94759 1503 aa-0.03□□□□□ -2.41
XRCC4-202ENST00000338635 VPS13AQ96RL7 3174 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 BIRC6Q9NR09 4857 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 FRYLO94915 3013 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 NDUFA1O15239 70 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 CLPSL2Q6UWE3 100 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 DNAH1Q9P2D7 4330 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 HERC2O95714 4834 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 ADGRG4Q8IZF6 3080 aa-0.04□□□□□ -2.42
XRCC4-202ENST00000338635 IQGAP2Q13576 1575 aa-0.05□□□□□ -2.42
XRCC4-202ENST00000338635 USP34Q70CQ2 3546 aa-0.05□□□□□ -2.42
XRCC4-202ENST00000338635 WDFY3Q8IZQ1 3526 aa-0.05□□□□□ -2.42
XRCC4-202ENST00000338635 NFAT5O94916 1531 aa-0.05□□□□□ -2.42
XRCC4-202ENST00000338635 KRTAP19-7Q3SYF9 63 aa-0.05□□□□□ -2.42
XRCC4-202ENST00000338635 CDH23Q9H251 3354 aa-0.06□□□□□ -2.42
XRCC4-202ENST00000338635 DNHD1Q96M86 4753 aa-0.06□□□□□ -2.42
XRCC4-202ENST00000338635 STARD9Q9P2P6 4700 aa-0.06□□□□□ -2.42
XRCC4-202ENST00000338635 CLTCL1P53675 1640 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms