RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
PTDSS1-201ENST00000337004 TNXBP22105 4242 aa11.02□□□□□ -0.65
PTDSS1-201ENST00000337004 KRTAP10-6P60371 365 aaPredicted RBP10.98□□□□□ -0.65
PTDSS1-201ENST00000337004 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
PTDSS1-201ENST00000337004 S4R3F8 94 aa10.98□□□□□ -0.65
PTDSS1-201ENST00000337004 KRTAP25-1Q3LHN0 102 aa10.97□□□□□ -0.65
PTDSS1-201ENST00000337004 KMT2CQ8NEZ4 4911 aaKnown RBP10.93□□□□□ -0.66
PTDSS1-201ENST00000337004 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
PTDSS1-201ENST00000337004 KRTAP13-4Q3LI77 160 aa10.84□□□□□ -0.67
PTDSS1-201ENST00000337004 HSPG2P98160 4391 aa10.84□□□□□ -0.67
PTDSS1-201ENST00000337004 DMBT1Q9UGM3 2413 aaPredicted RBP10.84□□□□□ -0.67
PTDSS1-201ENST00000337004 ROMO1P60602 79 aa10.81□□□□□ -0.68
PTDSS1-201ENST00000337004 A0A0D9SG42 100 aa10.81□□□□□ -0.68
PTDSS1-201ENST00000337004 MT1HL1P0DM35 61 aa10.79□□□□□ -0.68
PTDSS1-201ENST00000337004 KRTAP17-1Q9BYP8 105 aa10.76□□□□□ -0.69
PTDSS1-201ENST00000337004 P0C880 135 aa10.75□□□□□ -0.69
PTDSS1-201ENST00000337004 CRIPTQ9P021 101 aa10.74□□□□□ -0.69
PTDSS1-201ENST00000337004 RYR1P21817 5038 aa10.7□□□□□ -0.7
PTDSS1-201ENST00000337004 MYCBP2O75592 4640 aa10.7□□□□□ -0.7
PTDSS1-201ENST00000337004 TPRXLQ17RH7 258 aa10.65□□□□□ -0.71
PTDSS1-201ENST00000337004 RYR3Q15413 4870 aa10.54□□□□□ -0.72
PTDSS1-201ENST00000337004 KRTAP12-2P59991 146 aa10.52□□□□□ -0.73
PTDSS1-201ENST00000337004 KIAA1109Q2LD37 5005 aa10.49□□□□□ -0.73
PTDSS1-201ENST00000337004 M0QZ58 72 aa10.49□□□□□ -0.73
PTDSS1-201ENST00000337004 SPINT4Q6UDR6 99 aa10.47□□□□□ -0.73
PTDSS1-201ENST00000337004 KRTAP12-1P59990 96 aa10.46□□□□□ -0.74
PTDSS1-201ENST00000337004 LPAP08519 4548 aa10.45□□□□□ -0.74
PTDSS1-201ENST00000337004 LRP2P98164 4655 aa10.39□□□□□ -0.75
PTDSS1-201ENST00000337004 C10orf95Q9H7T3 257 aa10.36□□□□□ -0.75
PTDSS1-201ENST00000337004 SEC61BP60468 96 aaKnown RBP10.27□□□□□ -0.77
PTDSS1-201ENST00000337004 H3BS24 57 aa10.25□□□□□ -0.77
PTDSS1-201ENST00000337004 KRTAP4-5Q9BYR2 181 aa10.21□□□□□ -0.77
PTDSS1-201ENST00000337004 R4GN34 69 aa10.21□□□□□ -0.77
PTDSS1-201ENST00000337004 EPPK1P58107 5090 aaKnown RBP10.16□□□□□ -0.78
PTDSS1-201ENST00000337004 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
PTDSS1-201ENST00000337004 J3QL48 77 aa10.03□□□□□ -0.8
PTDSS1-201ENST00000337004 KRTAP4-1Q9BYQ7 146 aa10.03□□□□□ -0.8
PTDSS1-201ENST00000337004 KRTAP15-1Q3LI76 137 aa9.99□□□□□ -0.81
PTDSS1-201ENST00000337004 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
PTDSS1-201ENST00000337004 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
PTDSS1-201ENST00000337004 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
PTDSS1-201ENST00000337004 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
PTDSS1-201ENST00000337004 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
PTDSS1-201ENST00000337004 HERC2O95714 4834 aa9.66□□□□□ -0.86
PTDSS1-201ENST00000337004 BIRC6Q9NR09 4857 aa9.61□□□□□ -0.87
PTDSS1-201ENST00000337004 PP632Q6XCG6 107 aa9.6□□□□□ -0.87
PTDSS1-201ENST00000337004 PLAC4Q8WY50 150 aa9.59□□□□□ -0.87
PTDSS1-201ENST00000337004 MUC2Q02817 5179 aa9.47□□□□□ -0.89
PTDSS1-201ENST00000337004 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
PTDSS1-201ENST00000337004 TNP1P09430 55 aa9.36□□□□□ -0.91
PTDSS1-201ENST00000337004 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.93
PTDSS1-201ENST00000337004 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
PTDSS1-201ENST00000337004 HERC1Q15751 4861 aa9.25□□□□□ -0.93
PTDSS1-201ENST00000337004 LUZP6Q538Z0 58 aa9.2□□□□□ -0.94
PTDSS1-201ENST00000337004 SPRR2GQ9BYE4 73 aa9.19□□□□□ -0.94
PTDSS1-201ENST00000337004 PCLOQ9Y6V0 5065 aa9.19□□□□□ -0.94
PTDSS1-201ENST00000337004 HMCN2Q8NDA2 5059 aa9.16□□□□□ -0.94
PTDSS1-201ENST00000337004 M0R2T5 61 aa9.12□□□□□ -0.95
PTDSS1-201ENST00000337004 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
PTDSS1-201ENST00000337004 MT1HP80294 61 aa9.02□□□□□ -0.97
PTDSS1-201ENST00000337004 FAT4Q6V0I7 4981 aa8.99□□□□□ -0.97
PTDSS1-201ENST00000337004 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
PTDSS1-201ENST00000337004 SPRR5A0A1B0GTR4 108 aa8.9□□□□□ -0.98
PTDSS1-201ENST00000337004 MT2AP02795 61 aa8.9□□□□□ -0.99
PTDSS1-201ENST00000337004 MT1FP04733 61 aa8.89□□□□□ -0.99
PTDSS1-201ENST00000337004 KRTAP9-8Q9BYQ0 159 aa8.83□□□□□ -1
PTDSS1-201ENST00000337004 LCE3AQ5TA76 89 aa8.79□□□□□ -1
PTDSS1-201ENST00000337004 KRTAP19-8Q3LI54 63 aa8.76□□□□□ -1.01
PTDSS1-201ENST00000337004 RNF213Q63HN8 5207 aa8.75□□□□□ -1.01
PTDSS1-201ENST00000337004 A0A0A0MQY5 61 aa8.74□□□□□ -1.01
PTDSS1-201ENST00000337004 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
PTDSS1-201ENST00000337004 MT1BP07438 61 aa8.62□□□□□ -1.03
PTDSS1-201ENST00000337004 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
PTDSS1-201ENST00000337004 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
PTDSS1-201ENST00000337004 MT1XP80297 61 aa8.57□□□□□ -1.04
PTDSS1-201ENST00000337004 KRTAP10-12P60413 245 aa8.46□□□□□ -1.06
PTDSS1-201ENST00000337004 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
PTDSS1-201ENST00000337004 KRTAP12-3P60328 96 aa8.4□□□□□ -1.06
PTDSS1-201ENST00000337004 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
PTDSS1-201ENST00000337004 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
PTDSS1-201ENST00000337004 LCE2BO14633 110 aa8.08□□□□□ -1.12
PTDSS1-201ENST00000337004 KRTAP19-5Q3LI72 72 aa8.01□□□□□ -1.13
PTDSS1-201ENST00000337004 INE1O15225 51 aa7.92□□□□□ -1.14
PTDSS1-201ENST00000337004 LCE3CQ5T5A8 94 aa7.91□□□□□ -1.14
PTDSS1-201ENST00000337004 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
PTDSS1-201ENST00000337004 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
PTDSS1-201ENST00000337004 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
PTDSS1-201ENST00000337004 USH2AO75445 5202 aa7.76□□□□□ -1.17
PTDSS1-201ENST00000337004 KMT2DO14686 5537 aa7.67□□□□□ -1.18
PTDSS1-201ENST00000337004 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
PTDSS1-201ENST00000337004 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
PTDSS1-201ENST00000337004 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
PTDSS1-201ENST00000337004 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
PTDSS1-201ENST00000337004 MT1LQ93083 61 aa7.44□□□□□ -1.22
PTDSS1-201ENST00000337004 MT1EP04732 61 aa7.42□□□□□ -1.22
PTDSS1-201ENST00000337004 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
PTDSS1-201ENST00000337004 KRTAP2-3P0C7H8 128 aa7.37□□□□□ -1.23
PTDSS1-201ENST00000337004 KRTAP2-4Q9BYR9 128 aa7.37□□□□□ -1.23
PTDSS1-201ENST00000337004 KRTAP2-1Q9BYU5 128 aa7.37□□□□□ -1.23
PTDSS1-201ENST00000337004 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms