RNA–Protein interactions for RNA: ENST00000336553.10

FGFR2-201, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-201ENST00000336553 KRTAP10-8P60410 259 aa11.2□□□□□ -0.62
FGFR2-201ENST00000336553 H1FX-AS1Q4G0G2 97 aa11.2□□□□□ -0.62
FGFR2-201ENST00000336553 LINC01554Q52M75 96 aa11.19□□□□□ -0.62
FGFR2-201ENST00000336553 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
FGFR2-201ENST00000336553 KIAA1109Q2LD37 5005 aa11.09□□□□□ -0.63
FGFR2-201ENST00000336553 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
FGFR2-201ENST00000336553 EPPK1P58107 5090 aaKnown RBP10.98□□□□□ -0.65
FGFR2-201ENST00000336553 MYCBP2O75592 4640 aa10.98□□□□□ -0.65
FGFR2-201ENST00000336553 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
FGFR2-201ENST00000336553 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
FGFR2-201ENST00000336553 KRTAP3-3Q9BYR6 98 aa10.92□□□□□ -0.66
FGFR2-201ENST00000336553 K7ERS5 55 aa10.9□□□□□ -0.66
FGFR2-201ENST00000336553 KRTAP25-1Q3LHN0 102 aa10.87□□□□□ -0.67
FGFR2-201ENST00000336553 XP32Q5T750 250 aa10.87□□□□□ -0.67
FGFR2-201ENST00000336553 KRTAP10-6P60371 365 aaPredicted RBP10.86□□□□□ -0.67
FGFR2-201ENST00000336553 S4R3F8 94 aa10.8□□□□□ -0.68
FGFR2-201ENST00000336553 KRTAP13-4Q3LI77 160 aa10.79□□□□□ -0.68
FGFR2-201ENST00000336553 CRIPTQ9P021 101 aa10.79□□□□□ -0.68
FGFR2-201ENST00000336553 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
FGFR2-201ENST00000336553 A0A0D9SG42 100 aa10.76□□□□□ -0.69
FGFR2-201ENST00000336553 KRTAP4-5Q9BYR2 181 aa10.72□□□□□ -0.69
FGFR2-201ENST00000336553 ROMO1P60602 79 aa10.68□□□□□ -0.7
FGFR2-201ENST00000336553 P0C880 135 aa10.67□□□□□ -0.7
FGFR2-201ENST00000336553 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
FGFR2-201ENST00000336553 LRP2P98164 4655 aa10.56□□□□□ -0.72
FGFR2-201ENST00000336553 TPRXLQ17RH7 258 aa10.56□□□□□ -0.72
FGFR2-201ENST00000336553 LPAP08519 4548 aa10.55□□□□□ -0.72
FGFR2-201ENST00000336553 KRTAP12-2P59991 146 aa10.45□□□□□ -0.74
FGFR2-201ENST00000336553 SPINT4Q6UDR6 99 aa10.38□□□□□ -0.75
FGFR2-201ENST00000336553 C10orf95Q9H7T3 257 aa10.37□□□□□ -0.75
FGFR2-201ENST00000336553 KRTAP12-1P59990 96 aa10.35□□□□□ -0.75
FGFR2-201ENST00000336553 HERC2O95714 4834 aa10.33□□□□□ -0.76
FGFR2-201ENST00000336553 H3BS24 57 aa10.31□□□□□ -0.76
FGFR2-201ENST00000336553 M0QZ58 72 aa10.26□□□□□ -0.77
FGFR2-201ENST00000336553 BIRC6Q9NR09 4857 aa10.25□□□□□ -0.77
FGFR2-201ENST00000336553 J3QL48 77 aa10.24□□□□□ -0.77
FGFR2-201ENST00000336553 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
FGFR2-201ENST00000336553 SEC61BP60468 96 aaKnown RBP10.13□□□□□ -0.79
FGFR2-201ENST00000336553 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
FGFR2-201ENST00000336553 R4GN34 69 aa10.05□□□□□ -0.8
FGFR2-201ENST00000336553 LORP23490 312 aaPredicted RBP9.94□□□□□ -0.82
FGFR2-201ENST00000336553 KRTAP15-1Q3LI76 137 aa9.93□□□□□ -0.82
FGFR2-201ENST00000336553 KRTAP19-2Q3LHN2 52 aa9.91□□□□□ -0.82
FGFR2-201ENST00000336553 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
FGFR2-201ENST00000336553 HERC1Q15751 4861 aa9.83□□□□□ -0.84
FGFR2-201ENST00000336553 MUC2Q02817 5179 aa9.77□□□□□ -0.85
FGFR2-201ENST00000336553 HMCN2Q8NDA2 5059 aa9.76□□□□□ -0.85
FGFR2-201ENST00000336553 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
FGFR2-201ENST00000336553 FLGP20930 4061 aaPredicted RBP9.64□□□□□ -0.87
FGFR2-201ENST00000336553 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
FGFR2-201ENST00000336553 PLAC4Q8WY50 150 aa9.49□□□□□ -0.89
FGFR2-201ENST00000336553 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
FGFR2-201ENST00000336553 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
FGFR2-201ENST00000336553 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
FGFR2-201ENST00000336553 RNF213Q63HN8 5207 aa9.31□□□□□ -0.92
FGFR2-201ENST00000336553 UBR4Q5T4S7 5183 aa9.28□□□□□ -0.92
FGFR2-201ENST00000336553 TNP1P09430 55 aa9.18□□□□□ -0.94
FGFR2-201ENST00000336553 MT1HP80294 61 aa9.18□□□□□ -0.94
FGFR2-201ENST00000336553 M0R2T5 61 aa9.07□□□□□ -0.96
FGFR2-201ENST00000336553 LUZP6Q538Z0 58 aa9.06□□□□□ -0.96
FGFR2-201ENST00000336553 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
FGFR2-201ENST00000336553 SPRR2GQ9BYE4 73 aa9□□□□□ -0.97
FGFR2-201ENST00000336553 KRTAP19-1Q8IUB9 90 aa8.98□□□□□ -0.97
FGFR2-201ENST00000336553 MT2AP02795 61 aa8.95□□□□□ -0.98
FGFR2-201ENST00000336553 MT1FP04733 61 aa8.94□□□□□ -0.98
FGFR2-201ENST00000336553 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
FGFR2-201ENST00000336553 KRTAP10-10P60014 251 aa8.86□□□□□ -0.99
FGFR2-201ENST00000336553 SPRR5A0A1B0GTR4 108 aa8.77□□□□□ -1
FGFR2-201ENST00000336553 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
FGFR2-201ENST00000336553 KRTAP19-8Q3LI54 63 aa8.66□□□□□ -1.02
FGFR2-201ENST00000336553 A0A0A0MQY5 61 aa8.63□□□□□ -1.03
FGFR2-201ENST00000336553 MT1BP07438 61 aa8.58□□□□□ -1.04
FGFR2-201ENST00000336553 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
FGFR2-201ENST00000336553 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
FGFR2-201ENST00000336553 MT1XP80297 61 aa8.46□□□□□ -1.06
FGFR2-201ENST00000336553 KRTAP8-1Q8IUC2 63 aa8.45□□□□□ -1.06
FGFR2-201ENST00000336553 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
FGFR2-201ENST00000336553 KRTAP10-12P60413 245 aa8.33□□□□□ -1.08
FGFR2-201ENST00000336553 LCE2BO14633 110 aa8.29□□□□□ -1.08
FGFR2-201ENST00000336553 KRTAP12-3P60328 96 aa8.28□□□□□ -1.08
FGFR2-201ENST00000336553 KRTAP10-7P60409 375 aaPredicted RBP8.26□□□□□ -1.09
FGFR2-201ENST00000336553 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
FGFR2-201ENST00000336553 USH2AO75445 5202 aa8.07□□□□□ -1.12
FGFR2-201ENST00000336553 KRTAP19-5Q3LI72 72 aa7.93□□□□□ -1.14
FGFR2-201ENST00000336553 KMT2DO14686 5537 aa7.84□□□□□ -1.15
FGFR2-201ENST00000336553 LCE3CQ5T5A8 94 aa7.8□□□□□ -1.16
FGFR2-201ENST00000336553 INE1O15225 51 aa7.77□□□□□ -1.17
FGFR2-201ENST00000336553 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
FGFR2-201ENST00000336553 KRTAP4-8Q9BYQ9 185 aa7.75□□□□□ -1.17
FGFR2-201ENST00000336553 SSPOA2VEC9 5147 aa7.71□□□□□ -1.18
FGFR2-201ENST00000336553 KRTAP9-6A8MVA2 160 aa7.55□□□□□ -1.2
FGFR2-201ENST00000336553 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
FGFR2-201ENST00000336553 KRTAP19-7Q3SYF9 63 aa7.53□□□□□ -1.2
FGFR2-201ENST00000336553 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
FGFR2-201ENST00000336553 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
FGFR2-201ENST00000336553 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
FGFR2-201ENST00000336553 MT1LQ93083 61 aa7.32□□□□□ -1.24
FGFR2-201ENST00000336553 MT1EP04732 61 aa7.31□□□□□ -1.24
FGFR2-201ENST00000336553 KRTAP2-3P0C7H8 128 aa7.27□□□□□ -1.25
FGFR2-201ENST00000336553 KRTAP2-4Q9BYR9 128 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms