RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.65
NLRP3-201ENST00000336119 DNAH8Q96JB1 4490 aa4.71□□□□□ -1.66
NLRP3-201ENST00000336119 RYR3Q15413 4870 aa4.71□□□□□ -1.66
NLRP3-201ENST00000336119 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
NLRP3-201ENST00000336119 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
NLRP3-201ENST00000336119 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
NLRP3-201ENST00000336119 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
NLRP3-201ENST00000336119 LRP1BQ9NZR2 4599 aa4.66□□□□□ -1.66
NLRP3-201ENST00000336119 P0C880 135 aa4.65□□□□□ -1.66
NLRP3-201ENST00000336119 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
NLRP3-201ENST00000336119 HECTD4Q9Y4D8 3996 aa4.62□□□□□ -1.67
NLRP3-201ENST00000336119 EPPK1P58107 5090 aaKnown RBP4.59□□□□□ -1.67
NLRP3-201ENST00000336119 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
NLRP3-201ENST00000336119 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
NLRP3-201ENST00000336119 FAT1Q14517 4588 aa4.58□□□□□ -1.68
NLRP3-201ENST00000336119 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
NLRP3-201ENST00000336119 RYR1P21817 5038 aa4.56□□□□□ -1.68
NLRP3-201ENST00000336119 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
NLRP3-201ENST00000336119 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
NLRP3-201ENST00000336119 FRAS1Q86XX4 4008 aa4.53□□□□□ -1.68
NLRP3-201ENST00000336119 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
NLRP3-201ENST00000336119 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
NLRP3-201ENST00000336119 HERC2O95714 4834 aa4.51□□□□□ -1.69
NLRP3-201ENST00000336119 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
NLRP3-201ENST00000336119 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
NLRP3-201ENST00000336119 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
NLRP3-201ENST00000336119 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
NLRP3-201ENST00000336119 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
NLRP3-201ENST00000336119 KRTAP12-2P59991 146 aa4.47□□□□□ -1.69
NLRP3-201ENST00000336119 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
NLRP3-201ENST00000336119 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
NLRP3-201ENST00000336119 PKD1P98161 4303 aa4.45□□□□□ -1.7
NLRP3-201ENST00000336119 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
NLRP3-201ENST00000336119 HSPG2P98160 4391 aa4.43□□□□□ -1.7
NLRP3-201ENST00000336119 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
NLRP3-201ENST00000336119 TNP1P09430 55 aa4.37□□□□□ -1.71
NLRP3-201ENST00000336119 ABCA13Q86UQ4 5058 aa4.36□□□□□ -1.71
NLRP3-201ENST00000336119 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
NLRP3-201ENST00000336119 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
NLRP3-201ENST00000336119 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
NLRP3-201ENST00000336119 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
NLRP3-201ENST00000336119 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
NLRP3-201ENST00000336119 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
NLRP3-201ENST00000336119 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
NLRP3-201ENST00000336119 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
NLRP3-201ENST00000336119 HERC1Q15751 4861 aa4.17□□□□□ -1.74
NLRP3-201ENST00000336119 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
NLRP3-201ENST00000336119 LRP2P98164 4655 aa4.13□□□□□ -1.75
NLRP3-201ENST00000336119 TNXBP22105 4242 aa4.08□□□□□ -1.76
NLRP3-201ENST00000336119 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
NLRP3-201ENST00000336119 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
NLRP3-201ENST00000336119 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
NLRP3-201ENST00000336119 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
NLRP3-201ENST00000336119 LPAP08519 4548 aa3.97□□□□□ -1.77
NLRP3-201ENST00000336119 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
NLRP3-201ENST00000336119 MT1HP80294 61 aa3.95□□□□□ -1.78
NLRP3-201ENST00000336119 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
NLRP3-201ENST00000336119 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
NLRP3-201ENST00000336119 MUC2Q02817 5179 aa3.88□□□□□ -1.79
NLRP3-201ENST00000336119 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
NLRP3-201ENST00000336119 MT2AP02795 61 aa3.87□□□□□ -1.79
NLRP3-201ENST00000336119 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
NLRP3-201ENST00000336119 MT1FP04733 61 aa3.83□□□□□ -1.8
NLRP3-201ENST00000336119 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
NLRP3-201ENST00000336119 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
NLRP3-201ENST00000336119 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
NLRP3-201ENST00000336119 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
NLRP3-201ENST00000336119 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
NLRP3-201ENST00000336119 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
NLRP3-201ENST00000336119 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
NLRP3-201ENST00000336119 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
NLRP3-201ENST00000336119 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
NLRP3-201ENST00000336119 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
NLRP3-201ENST00000336119 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
NLRP3-201ENST00000336119 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
NLRP3-201ENST00000336119 MT1BP07438 61 aa3.63□□□□□ -1.83
NLRP3-201ENST00000336119 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
NLRP3-201ENST00000336119 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
NLRP3-201ENST00000336119 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
NLRP3-201ENST00000336119 MT1XP80297 61 aa3.6□□□□□ -1.83
NLRP3-201ENST00000336119 KRTAP10-5P60370 271 aa3.59□□□□□ -1.84
NLRP3-201ENST00000336119 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
NLRP3-201ENST00000336119 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
NLRP3-201ENST00000336119 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
NLRP3-201ENST00000336119 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
NLRP3-201ENST00000336119 INE1O15225 51 aa3.51□□□□□ -1.85
NLRP3-201ENST00000336119 LCE2BO14633 110 aa3.5□□□□□ -1.85
NLRP3-201ENST00000336119 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
NLRP3-201ENST00000336119 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
NLRP3-201ENST00000336119 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
NLRP3-201ENST00000336119 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
NLRP3-201ENST00000336119 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.88
NLRP3-201ENST00000336119 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.88
NLRP3-201ENST00000336119 USH2AO75445 5202 aa3.32□□□□□ -1.88
NLRP3-201ENST00000336119 SPRR2FQ96RM1 72 aa3.28□□□□□ -1.88
NLRP3-201ENST00000336119 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
NLRP3-201ENST00000336119 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
NLRP3-201ENST00000336119 MT1EP04732 61 aa3.17□□□□□ -1.9
NLRP3-201ENST00000336119 MT1LQ93083 61 aa3.17□□□□□ -1.9
NLRP3-201ENST00000336119 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms