RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 Q5VSD8 79 aa7□□□□□ -1.29
RC3H2-201ENST00000335387 FLG2Q5D862 2391 aaPredicted RBP6.99□□□□□ -1.29
RC3H2-201ENST00000335387 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
RC3H2-201ENST00000335387 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
RC3H2-201ENST00000335387 A0A1B0GU33 70 aa6.98□□□□□ -1.29
RC3H2-201ENST00000335387 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
RC3H2-201ENST00000335387 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
RC3H2-201ENST00000335387 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
RC3H2-201ENST00000335387 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
RC3H2-201ENST00000335387 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
RC3H2-201ENST00000335387 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
RC3H2-201ENST00000335387 XP32Q5T750 250 aa6.87□□□□□ -1.31
RC3H2-201ENST00000335387 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
RC3H2-201ENST00000335387 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
RC3H2-201ENST00000335387 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
RC3H2-201ENST00000335387 J3QL48 77 aa6.81□□□□□ -1.32
RC3H2-201ENST00000335387 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
RC3H2-201ENST00000335387 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
RC3H2-201ENST00000335387 S4R3F8 94 aa6.75□□□□□ -1.33
RC3H2-201ENST00000335387 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
RC3H2-201ENST00000335387 K7ERS5 55 aa6.72□□□□□ -1.33
RC3H2-201ENST00000335387 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.33
RC3H2-201ENST00000335387 TPRXLQ17RH7 258 aa6.68□□□□□ -1.34
RC3H2-201ENST00000335387 DMBT1Q9UGM3 2413 aaPredicted RBP6.67□□□□□ -1.34
RC3H2-201ENST00000335387 ROMO1P60602 79 aa6.65□□□□□ -1.34
RC3H2-201ENST00000335387 P0C880 135 aa6.6□□□□□ -1.35
RC3H2-201ENST00000335387 LPAP08519 4548 aa6.58□□□□□ -1.36
RC3H2-201ENST00000335387 LRP2P98164 4655 aa6.52□□□□□ -1.36
RC3H2-201ENST00000335387 M0QZ58 72 aa6.52□□□□□ -1.37
RC3H2-201ENST00000335387 MUC17Q685J3 4493 aa6.52□□□□□ -1.37
RC3H2-201ENST00000335387 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
RC3H2-201ENST00000335387 HERC1Q15751 4861 aa6.49□□□□□ -1.37
RC3H2-201ENST00000335387 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
RC3H2-201ENST00000335387 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.37
RC3H2-201ENST00000335387 A0A0D9SG42 100 aa6.45□□□□□ -1.38
RC3H2-201ENST00000335387 CRIPTQ9P021 101 aa6.35□□□□□ -1.39
RC3H2-201ENST00000335387 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
RC3H2-201ENST00000335387 H3BS24 57 aa6.34□□□□□ -1.4
RC3H2-201ENST00000335387 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.4
RC3H2-201ENST00000335387 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
RC3H2-201ENST00000335387 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
RC3H2-201ENST00000335387 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
RC3H2-201ENST00000335387 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
RC3H2-201ENST00000335387 R4GN34 69 aa6.18□□□□□ -1.42
RC3H2-201ENST00000335387 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.42
RC3H2-201ENST00000335387 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.43
RC3H2-201ENST00000335387 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
RC3H2-201ENST00000335387 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
RC3H2-201ENST00000335387 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
RC3H2-201ENST00000335387 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
RC3H2-201ENST00000335387 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
RC3H2-201ENST00000335387 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
RC3H2-201ENST00000335387 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
RC3H2-201ENST00000335387 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
RC3H2-201ENST00000335387 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
RC3H2-201ENST00000335387 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
RC3H2-201ENST00000335387 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
RC3H2-201ENST00000335387 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
RC3H2-201ENST00000335387 MUC2Q02817 5179 aa5.8□□□□□ -1.48
RC3H2-201ENST00000335387 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
RC3H2-201ENST00000335387 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
RC3H2-201ENST00000335387 TNP1P09430 55 aa5.72□□□□□ -1.49
RC3H2-201ENST00000335387 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
RC3H2-201ENST00000335387 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
RC3H2-201ENST00000335387 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
RC3H2-201ENST00000335387 MT1HP80294 61 aa5.65□□□□□ -1.51
RC3H2-201ENST00000335387 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
RC3H2-201ENST00000335387 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
RC3H2-201ENST00000335387 MT2AP02795 61 aa5.56□□□□□ -1.52
RC3H2-201ENST00000335387 MT1FP04733 61 aa5.54□□□□□ -1.52
RC3H2-201ENST00000335387 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
RC3H2-201ENST00000335387 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
RC3H2-201ENST00000335387 M0R2T5 61 aa5.44□□□□□ -1.54
RC3H2-201ENST00000335387 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
RC3H2-201ENST00000335387 MT1BP07438 61 aa5.42□□□□□ -1.54
RC3H2-201ENST00000335387 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
RC3H2-201ENST00000335387 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
RC3H2-201ENST00000335387 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
RC3H2-201ENST00000335387 MT1XP80297 61 aa5.39□□□□□ -1.55
RC3H2-201ENST00000335387 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
RC3H2-201ENST00000335387 LCE2BO14633 110 aa5.23□□□□□ -1.57
RC3H2-201ENST00000335387 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
RC3H2-201ENST00000335387 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
RC3H2-201ENST00000335387 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
RC3H2-201ENST00000335387 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
RC3H2-201ENST00000335387 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
RC3H2-201ENST00000335387 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
RC3H2-201ENST00000335387 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
RC3H2-201ENST00000335387 USH2AO75445 5202 aa5.01□□□□□ -1.61
RC3H2-201ENST00000335387 INE1O15225 51 aa4.94□□□□□ -1.62
RC3H2-201ENST00000335387 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
RC3H2-201ENST00000335387 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
RC3H2-201ENST00000335387 SSPOA2VEC9 5147 aa4.93□□□□□ -1.62
RC3H2-201ENST00000335387 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
RC3H2-201ENST00000335387 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
RC3H2-201ENST00000335387 FCGBPQ9Y6R7 5405 aaPredicted RBP4.87□□□□□ -1.63
RC3H2-201ENST00000335387 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
RC3H2-201ENST00000335387 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
RC3H2-201ENST00000335387 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
RC3H2-201ENST00000335387 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms