RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
KPNA4-201ENST00000334256 SPRR2DP22532 72 aa5.21□□□□□ -1.58
KPNA4-201ENST00000334256 KRTAP10-4P60372 401 aaPredicted RBP5.17□□□□□ -1.58
KPNA4-201ENST00000334256 HRNRQ86YZ3 2850 aaPredicted RBP5.16□□□□□ -1.58
KPNA4-201ENST00000334256 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
KPNA4-201ENST00000334256 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
KPNA4-201ENST00000334256 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
KPNA4-201ENST00000334256 LCE2BO14633 110 aa5.03□□□□□ -1.6
KPNA4-201ENST00000334256 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
KPNA4-201ENST00000334256 AKAP9Q99996 3911 aa5□□□□□ -1.61
KPNA4-201ENST00000334256 HUWE1Q7Z6Z7 4374 aaKnown RBP4.99□□□□□ -1.61
KPNA4-201ENST00000334256 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
KPNA4-201ENST00000334256 MT1HP80294 61 aa4.94□□□□□ -1.62
KPNA4-201ENST00000334256 ANK3Q12955 4377 aaKnown RBP4.93□□□□□ -1.62
KPNA4-201ENST00000334256 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
KPNA4-201ENST00000334256 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
KPNA4-201ENST00000334256 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
KPNA4-201ENST00000334256 MT4P47944 62 aa4.89□□□□□ -1.63
KPNA4-201ENST00000334256 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
KPNA4-201ENST00000334256 ALMS1Q8TCU4 4167 aa4.8□□□□□ -1.64
KPNA4-201ENST00000334256 DNAH1Q9P2D7 4330 aa4.76□□□□□ -1.65
KPNA4-201ENST00000334256 MT1GP13640 62 aa4.73□□□□□ -1.65
KPNA4-201ENST00000334256 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
KPNA4-201ENST00000334256 FRAS1Q86XX4 4008 aa4.72□□□□□ -1.65
KPNA4-201ENST00000334256 ZNF469Q96JG9 3925 aaPredicted RBP4.72□□□□□ -1.65
KPNA4-201ENST00000334256 MT2AP02795 61 aa4.7□□□□□ -1.66
KPNA4-201ENST00000334256 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
KPNA4-201ENST00000334256 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
KPNA4-201ENST00000334256 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
KPNA4-201ENST00000334256 DNAH2Q9P225 4427 aa4.67□□□□□ -1.66
KPNA4-201ENST00000334256 LYSTQ99698 3801 aa4.64□□□□□ -1.67
KPNA4-201ENST00000334256 MT1FP04733 61 aa4.62□□□□□ -1.67
KPNA4-201ENST00000334256 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
KPNA4-201ENST00000334256 KMT2AQ03164 3969 aa4.57□□□□□ -1.68
KPNA4-201ENST00000334256 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
KPNA4-201ENST00000334256 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
KPNA4-201ENST00000334256 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
KPNA4-201ENST00000334256 ANK2Q01484 3957 aa4.49□□□□□ -1.69
KPNA4-201ENST00000334256 KRTAP17-1Q9BYP8 105 aa4.46□□□□□ -1.7
KPNA4-201ENST00000334256 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.7
KPNA4-201ENST00000334256 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
KPNA4-201ENST00000334256 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
KPNA4-201ENST00000334256 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
KPNA4-201ENST00000334256 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
KPNA4-201ENST00000334256 DNAH9Q9NYC9 4486 aa4.35□□□□□ -1.71
KPNA4-201ENST00000334256 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
KPNA4-201ENST00000334256 DNAH7Q8WXX0 4024 aa4.32□□□□□ -1.72
KPNA4-201ENST00000334256 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
KPNA4-201ENST00000334256 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
KPNA4-201ENST00000334256 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
KPNA4-201ENST00000334256 CMYA5Q8N3K9 4069 aa4.27□□□□□ -1.73
KPNA4-201ENST00000334256 PRM1P04553 51 aa4.25□□□□□ -1.73
KPNA4-201ENST00000334256 DNAH10Q8IVF4 4471 aa4.24□□□□□ -1.73
KPNA4-201ENST00000334256 FAT1Q14517 4588 aa4.19□□□□□ -1.74
KPNA4-201ENST00000334256 DNAH3Q8TD57 4116 aa4.19□□□□□ -1.74
KPNA4-201ENST00000334256 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.74
KPNA4-201ENST00000334256 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
KPNA4-201ENST00000334256 PRKDCP78527 4128 aaKnown RBP4.13□□□□□ -1.75
KPNA4-201ENST00000334256 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
KPNA4-201ENST00000334256 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
KPNA4-201ENST00000334256 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
KPNA4-201ENST00000334256 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
KPNA4-201ENST00000334256 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
KPNA4-201ENST00000334256 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
KPNA4-201ENST00000334256 HECTD4Q9Y4D8 3996 aa4.04□□□□□ -1.76
KPNA4-201ENST00000334256 SACSQ9NZJ4 4579 aa4.04□□□□□ -1.76
KPNA4-201ENST00000334256 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
KPNA4-201ENST00000334256 MT3P25713 68 aa4.03□□□□□ -1.76
KPNA4-201ENST00000334256 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
KPNA4-201ENST00000334256 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
KPNA4-201ENST00000334256 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
KPNA4-201ENST00000334256 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
KPNA4-201ENST00000334256 PKD1P98161 4303 aa4.01□□□□□ -1.77
KPNA4-201ENST00000334256 LPAP08519 4548 aa4.01□□□□□ -1.77
KPNA4-201ENST00000334256 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
KPNA4-201ENST00000334256 MT1XP80297 61 aa3.99□□□□□ -1.77
KPNA4-201ENST00000334256 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
KPNA4-201ENST00000334256 PLECQ15149 4684 aaKnown RBP3.97□□□□□ -1.77
KPNA4-201ENST00000334256 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.78
KPNA4-201ENST00000334256 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
KPNA4-201ENST00000334256 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
KPNA4-201ENST00000334256 DYNC2H1Q8NCM8 4307 aaKnown RBP3.95□□□□□ -1.78
KPNA4-201ENST00000334256 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
KPNA4-201ENST00000334256 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
KPNA4-201ENST00000334256 DNHD1Q96M86 4753 aa3.89□□□□□ -1.79
KPNA4-201ENST00000334256 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
KPNA4-201ENST00000334256 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.8
KPNA4-201ENST00000334256 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
KPNA4-201ENST00000334256 MT1BP07438 61 aa3.83□□□□□ -1.8
KPNA4-201ENST00000334256 STARD9Q9P2P6 4700 aa3.8□□□□□ -1.8
KPNA4-201ENST00000334256 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
KPNA4-201ENST00000334256 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
KPNA4-201ENST00000334256 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
KPNA4-201ENST00000334256 LRP1Q07954 4544 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms