RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 DYNC1H1Q14204 4646 aaKnown RBP5.96□□□□□ -1.45
CCDC87-201ENST00000333861 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
CCDC87-201ENST00000333861 K7ERS5 55 aa5.94□□□□□ -1.46
CCDC87-201ENST00000333861 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.47
CCDC87-201ENST00000333861 HSPG2P98160 4391 aa5.88□□□□□ -1.47
CCDC87-201ENST00000333861 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
CCDC87-201ENST00000333861 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
CCDC87-201ENST00000333861 LPAP08519 4548 aa5.85□□□□□ -1.47
CCDC87-201ENST00000333861 EPPK1P58107 5090 aaKnown RBP5.84□□□□□ -1.47
CCDC87-201ENST00000333861 KIAA1109Q2LD37 5005 aa5.83□□□□□ -1.48
CCDC87-201ENST00000333861 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
CCDC87-201ENST00000333861 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CCDC87-201ENST00000333861 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
CCDC87-201ENST00000333861 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
CCDC87-201ENST00000333861 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
CCDC87-201ENST00000333861 Q5VSD8 79 aa5.76□□□□□ -1.49
CCDC87-201ENST00000333861 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
CCDC87-201ENST00000333861 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
CCDC87-201ENST00000333861 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
CCDC87-201ENST00000333861 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
CCDC87-201ENST00000333861 RYR1P21817 5038 aa5.73□□□□□ -1.49
CCDC87-201ENST00000333861 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
CCDC87-201ENST00000333861 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
CCDC87-201ENST00000333861 KRTAP3-2Q9BYR7 98 aa5.67□□□□□ -1.5
CCDC87-201ENST00000333861 S4R3F8 94 aa5.67□□□□□ -1.5
CCDC87-201ENST00000333861 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
CCDC87-201ENST00000333861 KRTAP4-5Q9BYR2 181 aa5.63□□□□□ -1.51
CCDC87-201ENST00000333861 LRP2P98164 4655 aa5.62□□□□□ -1.51
CCDC87-201ENST00000333861 RPS29P62273 56 aaKnown RBP5.61□□□□□ -1.51
CCDC87-201ENST00000333861 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
CCDC87-201ENST00000333861 TNXBP22105 4242 aa5.52□□□□□ -1.53
CCDC87-201ENST00000333861 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
CCDC87-201ENST00000333861 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
CCDC87-201ENST00000333861 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
CCDC87-201ENST00000333861 HERC2O95714 4834 aa5.48□□□□□ -1.53
CCDC87-201ENST00000333861 XP32Q5T750 250 aa5.47□□□□□ -1.53
CCDC87-201ENST00000333861 LUZP6Q538Z0 58 aa5.45□□□□□ -1.54
CCDC87-201ENST00000333861 J3QL48 77 aa5.43□□□□□ -1.54
CCDC87-201ENST00000333861 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
CCDC87-201ENST00000333861 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
CCDC87-201ENST00000333861 MUC2Q02817 5179 aa5.38□□□□□ -1.55
CCDC87-201ENST00000333861 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
CCDC87-201ENST00000333861 M0QZ58 72 aa5.36□□□□□ -1.55
CCDC87-201ENST00000333861 HERC1Q15751 4861 aa5.28□□□□□ -1.56
CCDC87-201ENST00000333861 R4GN34 69 aa5.26□□□□□ -1.57
CCDC87-201ENST00000333861 CAMK2N1Q7Z7J9 78 aa5.09□□□□□ -1.6
CCDC87-201ENST00000333861 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
CCDC87-201ENST00000333861 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
CCDC87-201ENST00000333861 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
CCDC87-201ENST00000333861 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
CCDC87-201ENST00000333861 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
CCDC87-201ENST00000333861 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
CCDC87-201ENST00000333861 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
CCDC87-201ENST00000333861 PP632Q6XCG6 107 aa4.9□□□□□ -1.62
CCDC87-201ENST00000333861 TNP1P09430 55 aa4.8□□□□□ -1.64
CCDC87-201ENST00000333861 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
CCDC87-201ENST00000333861 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
CCDC87-201ENST00000333861 FLGP20930 4061 aaPredicted RBP4.71□□□□□ -1.65
CCDC87-201ENST00000333861 M0R2T5 61 aa4.71□□□□□ -1.66
CCDC87-201ENST00000333861 LCE2CQ5TA81 110 aa4.71□□□□□ -1.66
CCDC87-201ENST00000333861 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
CCDC87-201ENST00000333861 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
CCDC87-201ENST00000333861 MT1HP80294 61 aa4.63□□□□□ -1.67
CCDC87-201ENST00000333861 KMT2DO14686 5537 aa4.62□□□□□ -1.67
CCDC87-201ENST00000333861 USH2AO75445 5202 aa4.55□□□□□ -1.68
CCDC87-201ENST00000333861 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
CCDC87-201ENST00000333861 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
CCDC87-201ENST00000333861 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
CCDC87-201ENST00000333861 MT2AP02795 61 aa4.45□□□□□ -1.7
CCDC87-201ENST00000333861 MT1FP04733 61 aa4.45□□□□□ -1.7
CCDC87-201ENST00000333861 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
CCDC87-201ENST00000333861 INE1O15225 51 aa4.44□□□□□ -1.7
CCDC87-201ENST00000333861 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
CCDC87-201ENST00000333861 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
CCDC87-201ENST00000333861 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
CCDC87-201ENST00000333861 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
CCDC87-201ENST00000333861 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
CCDC87-201ENST00000333861 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
CCDC87-201ENST00000333861 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
CCDC87-201ENST00000333861 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
CCDC87-201ENST00000333861 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
CCDC87-201ENST00000333861 MT1XP80297 61 aa4.25□□□□□ -1.73
CCDC87-201ENST00000333861 MT1BP07438 61 aa4.21□□□□□ -1.74
CCDC87-201ENST00000333861 LCE2BO14633 110 aa4.21□□□□□ -1.74
CCDC87-201ENST00000333861 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
CCDC87-201ENST00000333861 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
CCDC87-201ENST00000333861 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
CCDC87-201ENST00000333861 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
CCDC87-201ENST00000333861 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.75
CCDC87-201ENST00000333861 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
CCDC87-201ENST00000333861 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
CCDC87-201ENST00000333861 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
CCDC87-201ENST00000333861 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
CCDC87-201ENST00000333861 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
CCDC87-201ENST00000333861 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
CCDC87-201ENST00000333861 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
CCDC87-201ENST00000333861 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
CCDC87-201ENST00000333861 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
CCDC87-201ENST00000333861 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
CCDC87-201ENST00000333861 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms