RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 S4R3F8 94 aa6.2□□□□□ -1.42
LIMK2-202ENST00000333611 PKD1P98161 4303 aa6.16□□□□□ -1.42
LIMK2-202ENST00000333611 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
LIMK2-202ENST00000333611 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
LIMK2-202ENST00000333611 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
LIMK2-202ENST00000333611 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
LIMK2-202ENST00000333611 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
LIMK2-202ENST00000333611 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
LIMK2-202ENST00000333611 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
LIMK2-202ENST00000333611 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
LIMK2-202ENST00000333611 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
LIMK2-202ENST00000333611 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
LIMK2-202ENST00000333611 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
LIMK2-202ENST00000333611 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
LIMK2-202ENST00000333611 APOBP04114 4563 aaKnown RBP5.93□□□□□ -1.46
LIMK2-202ENST00000333611 Q5VSD8 79 aa5.93□□□□□ -1.46
LIMK2-202ENST00000333611 A0A1B0GVY2 172 aa5.91□□□□□ -1.46
LIMK2-202ENST00000333611 XP32Q5T750 250 aa5.91□□□□□ -1.46
LIMK2-202ENST00000333611 KRTAP3-2Q9BYR7 98 aa5.91□□□□□ -1.46
LIMK2-202ENST00000333611 M0QZ58 72 aa5.89□□□□□ -1.47
LIMK2-202ENST00000333611 HSPG2P98160 4391 aa5.89□□□□□ -1.47
LIMK2-202ENST00000333611 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
LIMK2-202ENST00000333611 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.48
LIMK2-202ENST00000333611 R4GN34 69 aa5.83□□□□□ -1.48
LIMK2-202ENST00000333611 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
LIMK2-202ENST00000333611 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
LIMK2-202ENST00000333611 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
LIMK2-202ENST00000333611 RYR2Q92736 4967 aa5.73□□□□□ -1.49
LIMK2-202ENST00000333611 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
LIMK2-202ENST00000333611 LRP2P98164 4655 aa5.73□□□□□ -1.49
LIMK2-202ENST00000333611 LPAP08519 4548 aa5.72□□□□□ -1.49
LIMK2-202ENST00000333611 KRTAP21-3Q3LHN1 58 aa5.7□□□□□ -1.5
LIMK2-202ENST00000333611 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
LIMK2-202ENST00000333611 TNXBP22105 4242 aa5.66□□□□□ -1.5
LIMK2-202ENST00000333611 RYR1P21817 5038 aa5.66□□□□□ -1.5
LIMK2-202ENST00000333611 RYR3Q15413 4870 aa5.65□□□□□ -1.51
LIMK2-202ENST00000333611 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
LIMK2-202ENST00000333611 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
LIMK2-202ENST00000333611 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
LIMK2-202ENST00000333611 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
LIMK2-202ENST00000333611 J3QL48 77 aa5.44□□□□□ -1.54
LIMK2-202ENST00000333611 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
LIMK2-202ENST00000333611 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
LIMK2-202ENST00000333611 KRTAP4-1Q9BYQ7 146 aa5.35□□□□□ -1.55
LIMK2-202ENST00000333611 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
LIMK2-202ENST00000333611 TNP1P09430 55 aa5.33□□□□□ -1.56
LIMK2-202ENST00000333611 MUC2Q02817 5179 aa5.32□□□□□ -1.56
LIMK2-202ENST00000333611 HERC2O95714 4834 aa5.18□□□□□ -1.58
LIMK2-202ENST00000333611 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
LIMK2-202ENST00000333611 M0R2T5 61 aa5.13□□□□□ -1.59
LIMK2-202ENST00000333611 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
LIMK2-202ENST00000333611 INE1O15225 51 aa5.07□□□□□ -1.6
LIMK2-202ENST00000333611 KRTAP19-2Q3LHN2 52 aa5.03□□□□□ -1.6
LIMK2-202ENST00000333611 HERC1Q15751 4861 aa5.01□□□□□ -1.61
LIMK2-202ENST00000333611 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
LIMK2-202ENST00000333611 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
LIMK2-202ENST00000333611 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
LIMK2-202ENST00000333611 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
LIMK2-202ENST00000333611 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
LIMK2-202ENST00000333611 KRTAP10-10P60014 251 aa4.9□□□□□ -1.63
LIMK2-202ENST00000333611 BIRC6Q9NR09 4857 aa4.85□□□□□ -1.63
LIMK2-202ENST00000333611 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
LIMK2-202ENST00000333611 HMCN2Q8NDA2 5059 aa4.78□□□□□ -1.64
LIMK2-202ENST00000333611 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
LIMK2-202ENST00000333611 LCE2CQ5TA81 110 aa4.76□□□□□ -1.65
LIMK2-202ENST00000333611 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
LIMK2-202ENST00000333611 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
LIMK2-202ENST00000333611 MT1FP04733 61 aa4.73□□□□□ -1.65
LIMK2-202ENST00000333611 MT1HP80294 61 aa4.7□□□□□ -1.66
LIMK2-202ENST00000333611 MT2AP02795 61 aa4.69□□□□□ -1.66
LIMK2-202ENST00000333611 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
LIMK2-202ENST00000333611 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
LIMK2-202ENST00000333611 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
LIMK2-202ENST00000333611 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
LIMK2-202ENST00000333611 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
LIMK2-202ENST00000333611 MT1XP80297 61 aa4.54□□□□□ -1.68
LIMK2-202ENST00000333611 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
LIMK2-202ENST00000333611 MT1BP07438 61 aa4.52□□□□□ -1.69
LIMK2-202ENST00000333611 USH2AO75445 5202 aa4.49□□□□□ -1.69
LIMK2-202ENST00000333611 KMT2DO14686 5537 aa4.48□□□□□ -1.69
LIMK2-202ENST00000333611 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
LIMK2-202ENST00000333611 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
LIMK2-202ENST00000333611 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
LIMK2-202ENST00000333611 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
LIMK2-202ENST00000333611 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
LIMK2-202ENST00000333611 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
LIMK2-202ENST00000333611 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
LIMK2-202ENST00000333611 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
LIMK2-202ENST00000333611 LCE2BO14633 110 aa4.24□□□□□ -1.73
LIMK2-202ENST00000333611 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
LIMK2-202ENST00000333611 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
LIMK2-202ENST00000333611 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
LIMK2-202ENST00000333611 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
LIMK2-202ENST00000333611 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
LIMK2-202ENST00000333611 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
LIMK2-202ENST00000333611 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
LIMK2-202ENST00000333611 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
LIMK2-202ENST00000333611 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
LIMK2-202ENST00000333611 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
LIMK2-202ENST00000333611 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms