RNA–Protein interactions for RNA: ENST00000333447.11

PPFIA2-201, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5 BASIC

Gene PPFIA2, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-201ENST00000333447 NIPBLQ6KC79 2804 aaeCLIP2.88□□□□□ -1.95
PPFIA2-201ENST00000333447 DNAH17Q9UFH2 4485 aa2.88□□□□□ -1.95
PPFIA2-201ENST00000333447 SRRM2Q9UQ35 2752 aaKnown RBP2.86□□□□□ -1.95
PPFIA2-201ENST00000333447 AKAP9Q99996 3911 aa2.85□□□□□ -1.95
PPFIA2-201ENST00000333447 DNAH3Q8TD57 4116 aa2.83□□□□□ -1.96
PPFIA2-201ENST00000333447 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
PPFIA2-201ENST00000333447 ZNF469Q96JG9 3925 aaPredicted RBP2.82□□□□□ -1.96
PPFIA2-201ENST00000333447 TENM3Q9P273 2699 aa2.82□□□□□ -1.96
PPFIA2-201ENST00000333447 MXRA5Q9NR99 2828 aa2.82□□□□□ -1.96
PPFIA2-201ENST00000333447 ZANQ9Y493 2812 aa2.81□□□□□ -1.96
PPFIA2-201ENST00000333447 DYNC2H1Q8NCM8 4307 aaKnown RBP2.8□□□□□ -1.96
PPFIA2-201ENST00000333447 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
PPFIA2-201ENST00000333447 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
PPFIA2-201ENST00000333447 DNAH5Q8TE73 4624 aa2.78□□□□□ -1.96
PPFIA2-201ENST00000333447 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
PPFIA2-201ENST00000333447 NF1P21359 2839 aa2.78□□□□□ -1.97
PPFIA2-201ENST00000333447 ANK3Q12955 4377 aaKnown RBP2.78□□□□□ -1.97
PPFIA2-201ENST00000333447 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
PPFIA2-201ENST00000333447 FAT2Q9NYQ8 4349 aa2.74□□□□□ -1.97
PPFIA2-201ENST00000333447 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
PPFIA2-201ENST00000333447 FBN2P35556 2912 aa2.73□□□□□ -1.97
PPFIA2-201ENST00000333447 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
PPFIA2-201ENST00000333447 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
PPFIA2-201ENST00000333447 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
PPFIA2-201ENST00000333447 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
PPFIA2-201ENST00000333447 MT2AP02795 61 aa2.71□□□□□ -1.98
PPFIA2-201ENST00000333447 PRM1P04553 51 aa2.71□□□□□ -1.98
PPFIA2-201ENST00000333447 APOBP04114 4563 aaKnown RBP2.71□□□□□ -1.98
PPFIA2-201ENST00000333447 HSPG2P98160 4391 aa2.69□□□□□ -1.98
PPFIA2-201ENST00000333447 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
PPFIA2-201ENST00000333447 ANK2Q01484 3957 aa2.68□□□□□ -1.98
PPFIA2-201ENST00000333447 COL7A1Q02388 2944 aa2.68□□□□□ -1.98
PPFIA2-201ENST00000333447 CSMD3Q7Z407 3707 aa2.67□□□□□ -1.98
PPFIA2-201ENST00000333447 MT1XP80297 61 aa2.67□□□□□ -1.98
PPFIA2-201ENST00000333447 VWFP04275 2813 aa2.66□□□□□ -1.98
PPFIA2-201ENST00000333447 PDZD2O15018 2839 aa2.66□□□□□ -1.98
PPFIA2-201ENST00000333447 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
PPFIA2-201ENST00000333447 LCE3BQ5TA77 95 aa2.65□□□□□ -1.98
PPFIA2-201ENST00000333447 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.98
PPFIA2-201ENST00000333447 MYCBP2O75592 4640 aa2.64□□□□□ -1.99
PPFIA2-201ENST00000333447 MT1HP80294 61 aa2.64□□□□□ -1.99
PPFIA2-201ENST00000333447 OTOGQ6ZRI0 2925 aa2.64□□□□□ -1.99
PPFIA2-201ENST00000333447 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
PPFIA2-201ENST00000333447 KRTAP19-1Q8IUB9 90 aa2.64□□□□□ -1.99
PPFIA2-201ENST00000333447 MT1LQ93083 61 aa2.62□□□□□ -1.99
PPFIA2-201ENST00000333447 MT1EP04732 61 aa2.62□□□□□ -1.99
PPFIA2-201ENST00000333447 MT1FP04733 61 aa2.61□□□□□ -1.99
PPFIA2-201ENST00000333447 PKD1P98161 4303 aa2.6□□□□□ -1.99
PPFIA2-201ENST00000333447 FBN3Q75N90 2809 aa2.6□□□□□ -1.99
PPFIA2-201ENST00000333447 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
PPFIA2-201ENST00000333447 LRP1Q07954 4544 aaKnown RBP2.58□□□□□ -2
PPFIA2-201ENST00000333447 HERC1Q15751 4861 aa2.57□□□□□ -2
PPFIA2-201ENST00000333447 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
PPFIA2-201ENST00000333447 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
PPFIA2-201ENST00000333447 MT1GP13640 62 aa2.55□□□□□ -2
PPFIA2-201ENST00000333447 DNAH7Q8WXX0 4024 aa2.55□□□□□ -2
PPFIA2-201ENST00000333447 MT1AP04731 61 aa2.55□□□□□ -2
PPFIA2-201ENST00000333447 SPRR2AP35326 72 aa2.52□□□□□ -2.01
PPFIA2-201ENST00000333447 MT1BP07438 61 aa2.52□□□□□ -2.01
PPFIA2-201ENST00000333447 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
PPFIA2-201ENST00000333447 LYSTQ99698 3801 aa2.5□□□□□ -2.01
PPFIA2-201ENST00000333447 SPRR2BP35325 72 aa2.47□□□□□ -2.01
PPFIA2-201ENST00000333447 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
PPFIA2-201ENST00000333447 FAT1Q14517 4588 aa2.45□□□□□ -2.02
PPFIA2-201ENST00000333447 LCE2CQ5TA81 110 aa2.43□□□□□ -2.02
PPFIA2-201ENST00000333447 FRAS1Q86XX4 4008 aa2.43□□□□□ -2.02
PPFIA2-201ENST00000333447 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
PPFIA2-201ENST00000333447 FAT3Q8TDW7 4589 aa2.42□□□□□ -2.02
PPFIA2-201ENST00000333447 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
PPFIA2-201ENST00000333447 DNHD1Q96M86 4753 aa2.39□□□□□ -2.03
PPFIA2-201ENST00000333447 LCE2DQ5TA82 110 aaPredicted RBP2.38□□□□□ -2.03
PPFIA2-201ENST00000333447 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
PPFIA2-201ENST00000333447 STARD9Q9P2P6 4700 aa2.36□□□□□ -2.03
PPFIA2-201ENST00000333447 SPRR2DP22532 72 aa2.35□□□□□ -2.03
PPFIA2-201ENST00000333447 KRTAP4-5Q9BYR2 181 aa2.35□□□□□ -2.03
PPFIA2-201ENST00000333447 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.03
PPFIA2-201ENST00000333447 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.04
PPFIA2-201ENST00000333447 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
PPFIA2-201ENST00000333447 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
PPFIA2-201ENST00000333447 TNXBP22105 4242 aa2.31□□□□□ -2.04
PPFIA2-201ENST00000333447 KRTAP9-8Q9BYQ0 159 aa2.31□□□□□ -2.04
PPFIA2-201ENST00000333447 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
PPFIA2-201ENST00000333447 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
PPFIA2-201ENST00000333447 MT1MQ8N339 61 aa2.3□□□□□ -2.04
PPFIA2-201ENST00000333447 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
PPFIA2-201ENST00000333447 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
PPFIA2-201ENST00000333447 KRTAP9-3Q9BYQ3 159 aa2.28□□□□□ -2.04
PPFIA2-201ENST00000333447 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
PPFIA2-201ENST00000333447 SPRR2EP22531 72 aa2.28□□□□□ -2.04
PPFIA2-201ENST00000333447 KRTAP4-8A0A0G2JLE6 195 aa2.26□□□□□ -2.05
PPFIA2-201ENST00000333447 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
PPFIA2-201ENST00000333447 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
PPFIA2-201ENST00000333447 KRTAP9-2Q9BYQ4 174 aa2.25□□□□□ -2.05
PPFIA2-201ENST00000333447 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
PPFIA2-201ENST00000333447 LCE2BO14633 110 aa2.23□□□□□ -2.05
PPFIA2-201ENST00000333447 LCE2AQ5TA79 106 aaPredicted RBP2.23□□□□□ -2.05
PPFIA2-201ENST00000333447 KMT2AQ03164 3969 aa2.23□□□□□ -2.05
PPFIA2-201ENST00000333447 KRTAP9-7A8MTY7 169 aa2.2□□□□□ -2.06
PPFIA2-201ENST00000333447 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
PPFIA2-201ENST00000333447 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms