RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
MEIS3-201ENST00000331559 PRAC1Q96KF2 57 aa12.12□□□□□ -0.47
MEIS3-201ENST00000331559 ADM2Q7Z4H4 148 aa12.11□□□□□ -0.47
MEIS3-201ENST00000331559 EPPK1P58107 5090 aaKnown RBP12.07□□□□□ -0.48
MEIS3-201ENST00000331559 H0YAA0 97 aa12.04□□□□□ -0.48
MEIS3-201ENST00000331559 MYCBP2O75592 4640 aa12.03□□□□□ -0.48
MEIS3-201ENST00000331559 TPRXLQ17RH7 258 aa12□□□□□ -0.49
MEIS3-201ENST00000331559 A0A1B0GU33 70 aa11.99□□□□□ -0.49
MEIS3-201ENST00000331559 H1FX-AS1Q4G0G2 97 aa11.95□□□□□ -0.5
MEIS3-201ENST00000331559 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
MEIS3-201ENST00000331559 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
MEIS3-201ENST00000331559 S4R3F8 94 aa11.77□□□□□ -0.53
MEIS3-201ENST00000331559 CSAG1Q6PB30 78 aa11.76□□□□□ -0.53
MEIS3-201ENST00000331559 KRTAP10-6P60371 365 aaPredicted RBP11.67□□□□□ -0.54
MEIS3-201ENST00000331559 J3QL48 77 aa11.66□□□□□ -0.54
MEIS3-201ENST00000331559 LINC01554Q52M75 96 aa11.66□□□□□ -0.54
MEIS3-201ENST00000331559 LRP2P98164 4655 aa11.61□□□□□ -0.55
MEIS3-201ENST00000331559 KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
MEIS3-201ENST00000331559 SEC61BP60468 96 aaKnown RBP11.57□□□□□ -0.56
MEIS3-201ENST00000331559 KRTAP13-4Q3LI77 160 aa11.55□□□□□ -0.56
MEIS3-201ENST00000331559 ABCA13Q86UQ4 5058 aa11.55□□□□□ -0.56
MEIS3-201ENST00000331559 K7ERS5 55 aa11.54□□□□□ -0.56
MEIS3-201ENST00000331559 LPAP08519 4548 aa11.54□□□□□ -0.56
MEIS3-201ENST00000331559 HERC2O95714 4834 aa11.45□□□□□ -0.58
MEIS3-201ENST00000331559 P0C880 135 aa11.45□□□□□ -0.58
MEIS3-201ENST00000331559 KRTAP25-1Q3LHN0 102 aa11.45□□□□□ -0.58
MEIS3-201ENST00000331559 BIRC6Q9NR09 4857 aa11.45□□□□□ -0.58
MEIS3-201ENST00000331559 A0A0D9SG42 100 aa11.43□□□□□ -0.58
MEIS3-201ENST00000331559 CRIPTQ9P021 101 aa11.33□□□□□ -0.6
MEIS3-201ENST00000331559 ROMO1P60602 79 aa11.32□□□□□ -0.6
MEIS3-201ENST00000331559 MUC17Q685J3 4493 aa11.25□□□□□ -0.61
MEIS3-201ENST00000331559 KRTAP4-1Q9BYQ7 146 aa11.24□□□□□ -0.61
MEIS3-201ENST00000331559 KRTAP12-2P59991 146 aa11.17□□□□□ -0.62
MEIS3-201ENST00000331559 M0QZ58 72 aa11.12□□□□□ -0.63
MEIS3-201ENST00000331559 KRTAP12-1P59990 96 aa11.09□□□□□ -0.63
MEIS3-201ENST00000331559 KRTAP19-2Q3LHN2 52 aa11.05□□□□□ -0.64
MEIS3-201ENST00000331559 SPINT4Q6UDR6 99 aa11.05□□□□□ -0.64
MEIS3-201ENST00000331559 C10orf95Q9H7T3 257 aa10.94□□□□□ -0.66
MEIS3-201ENST00000331559 R4GN34 69 aa10.88□□□□□ -0.67
MEIS3-201ENST00000331559 PCLOQ9Y6V0 5065 aa10.85□□□□□ -0.67
MEIS3-201ENST00000331559 HMCN2Q8NDA2 5059 aa10.83□□□□□ -0.68
MEIS3-201ENST00000331559 HERC1Q15751 4861 aa10.82□□□□□ -0.68
MEIS3-201ENST00000331559 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
MEIS3-201ENST00000331559 FLGP20930 4061 aaPredicted RBP10.7□□□□□ -0.7
MEIS3-201ENST00000331559 MUC2Q02817 5179 aa10.6□□□□□ -0.71
MEIS3-201ENST00000331559 LCE2CQ5TA81 110 aa10.54□□□□□ -0.72
MEIS3-201ENST00000331559 H3BS24 57 aa10.52□□□□□ -0.73
MEIS3-201ENST00000331559 KRTAP15-1Q3LI76 137 aa10.43□□□□□ -0.74
MEIS3-201ENST00000331559 M0R2T5 61 aa10.3□□□□□ -0.76
MEIS3-201ENST00000331559 MT1HP80294 61 aa10.3□□□□□ -0.76
MEIS3-201ENST00000331559 CAMK2N1Q7Z7J9 78 aa10.27□□□□□ -0.77
MEIS3-201ENST00000331559 RNF213Q63HN8 5207 aa10.26□□□□□ -0.77
MEIS3-201ENST00000331559 FAT4Q6V0I7 4981 aa10.18□□□□□ -0.78
MEIS3-201ENST00000331559 UBR4Q5T4S7 5183 aa10.17□□□□□ -0.78
MEIS3-201ENST00000331559 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
MEIS3-201ENST00000331559 NDUFAF8A1L188 74 aa10.13□□□□□ -0.79
MEIS3-201ENST00000331559 KRTAP19-1Q8IUB9 90 aa10.06□□□□□ -0.8
MEIS3-201ENST00000331559 MT2AP02795 61 aa10.04□□□□□ -0.8
MEIS3-201ENST00000331559 PP632Q6XCG6 107 aa10.01□□□□□ -0.81
MEIS3-201ENST00000331559 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
MEIS3-201ENST00000331559 PLAC4Q8WY50 150 aa10.01□□□□□ -0.81
MEIS3-201ENST00000331559 MT1FP04733 61 aa10□□□□□ -0.81
MEIS3-201ENST00000331559 KRTAP9-8Q9BYQ0 159 aa10□□□□□ -0.81
MEIS3-201ENST00000331559 TNP1P09430 55 aa9.88□□□□□ -0.83
MEIS3-201ENST00000331559 KRTAP19-8Q3LI54 63 aa9.79□□□□□ -0.84
MEIS3-201ENST00000331559 KRTAP23-1A1A580 65 aa9.76□□□□□ -0.85
MEIS3-201ENST00000331559 KRTAP9-3Q9BYQ3 159 aa9.62□□□□□ -0.87
MEIS3-201ENST00000331559 MT1BP07438 61 aa9.61□□□□□ -0.87
MEIS3-201ENST00000331559 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
MEIS3-201ENST00000331559 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
MEIS3-201ENST00000331559 KRTAP10-5P60370 271 aa9.43□□□□□ -0.9
MEIS3-201ENST00000331559 MT1XP80297 61 aa9.43□□□□□ -0.9
MEIS3-201ENST00000331559 LCE3AQ5TA76 89 aa9.37□□□□□ -0.91
MEIS3-201ENST00000331559 SPRR5A0A1B0GTR4 108 aa9.35□□□□□ -0.91
MEIS3-201ENST00000331559 PRO2289Q9P1D8 64 aa9.29□□□□□ -0.92
MEIS3-201ENST00000331559 LCE2BO14633 110 aa9.25□□□□□ -0.93
MEIS3-201ENST00000331559 KRTAP8-1Q8IUC2 63 aa9.17□□□□□ -0.94
MEIS3-201ENST00000331559 KRTAP10-12P60413 245 aa9.17□□□□□ -0.94
MEIS3-201ENST00000331559 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
MEIS3-201ENST00000331559 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
MEIS3-201ENST00000331559 KRTAP12-3P60328 96 aa8.94□□□□□ -0.98
MEIS3-201ENST00000331559 USH2AO75445 5202 aa8.79□□□□□ -1
MEIS3-201ENST00000331559 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
MEIS3-201ENST00000331559 KRTAP4-8A0A0G2JLE6 195 aa8.56□□□□□ -1.04
MEIS3-201ENST00000331559 KRTAP4-8Q9BYQ9 185 aa8.56□□□□□ -1.04
MEIS3-201ENST00000331559 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
MEIS3-201ENST00000331559 KMT2DO14686 5537 aa8.52□□□□□ -1.05
MEIS3-201ENST00000331559 SSPOA2VEC9 5147 aa8.49□□□□□ -1.05
MEIS3-201ENST00000331559 KRTAP19-7Q3SYF9 63 aa8.41□□□□□ -1.06
MEIS3-201ENST00000331559 LCE3CQ5T5A8 94 aa8.39□□□□□ -1.07
MEIS3-201ENST00000331559 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
MEIS3-201ENST00000331559 KRTAP19-4Q3LI73 84 aa8.3□□□□□ -1.08
MEIS3-201ENST00000331559 MT1EP04732 61 aa8.23□□□□□ -1.09
MEIS3-201ENST00000331559 MT1LQ93083 61 aa8.15□□□□□ -1.1
MEIS3-201ENST00000331559 INE1O15225 51 aa8.14□□□□□ -1.11
MEIS3-201ENST00000331559 KRTAP9-6A8MVA2 160 aa8.11□□□□□ -1.11
MEIS3-201ENST00000331559 KRTAP4-7Q9BYR0 210 aa8.05□□□□□ -1.12
MEIS3-201ENST00000331559 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
MEIS3-201ENST00000331559 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
MEIS3-201ENST00000331559 KRTAP19-3Q7Z4W3 81 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms