RNA–Protein interactions for RNA: ENST00000329276.9

NOP56-201, Transcript of NOP56 ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOP56, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-201ENST00000329276 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
NOP56-201ENST00000329276 A0A0D9SG42 100 aa9.97□□□□□ -0.81
NOP56-201ENST00000329276 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
NOP56-201ENST00000329276 PKHD1L1Q86WI1 4243 aa9.96□□□□□ -0.81
NOP56-201ENST00000329276 FAT1Q14517 4588 aa9.96□□□□□ -0.82
NOP56-201ENST00000329276 KRTAP15-1Q3LI76 137 aa9.95□□□□□ -0.82
NOP56-201ENST00000329276 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
NOP56-201ENST00000329276 APOBP04114 4563 aaKnown RBP9.93□□□□□ -0.82
NOP56-201ENST00000329276 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
NOP56-201ENST00000329276 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
NOP56-201ENST00000329276 NDUFAF8A1L188 74 aa9.91□□□□□ -0.82
NOP56-201ENST00000329276 S4R3F8 94 aa9.85□□□□□ -0.83
NOP56-201ENST00000329276 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
NOP56-201ENST00000329276 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
NOP56-201ENST00000329276 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
NOP56-201ENST00000329276 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
NOP56-201ENST00000329276 KIAA1109Q2LD37 5005 aa9.73□□□□□ -0.85
NOP56-201ENST00000329276 HSPG2P98160 4391 aa9.73□□□□□ -0.85
NOP56-201ENST00000329276 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
NOP56-201ENST00000329276 RYR1P21817 5038 aa9.67□□□□□ -0.86
NOP56-201ENST00000329276 XP32Q5T750 250 aa9.66□□□□□ -0.86
NOP56-201ENST00000329276 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
NOP56-201ENST00000329276 KRTAP17-1Q9BYP8 105 aa9.63□□□□□ -0.87
NOP56-201ENST00000329276 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
NOP56-201ENST00000329276 M0QZ58 72 aa9.57□□□□□ -0.88
NOP56-201ENST00000329276 FAT3Q8TDW7 4589 aa9.54□□□□□ -0.88
NOP56-201ENST00000329276 Q5VSD8 79 aa9.53□□□□□ -0.88
NOP56-201ENST00000329276 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
NOP56-201ENST00000329276 TNXBP22105 4242 aa9.46□□□□□ -0.89
NOP56-201ENST00000329276 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
NOP56-201ENST00000329276 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
NOP56-201ENST00000329276 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
NOP56-201ENST00000329276 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
NOP56-201ENST00000329276 A0A0A0MQY5 61 aa9.23□□□□□ -0.93
NOP56-201ENST00000329276 LUZP6Q538Z0 58 aa9.17□□□□□ -0.94
NOP56-201ENST00000329276 HERC2O95714 4834 aa9.17□□□□□ -0.94
NOP56-201ENST00000329276 R4GN34 69 aa9.16□□□□□ -0.94
NOP56-201ENST00000329276 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
NOP56-201ENST00000329276 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
NOP56-201ENST00000329276 PCLOQ9Y6V0 5065 aa9.03□□□□□ -0.96
NOP56-201ENST00000329276 LPAP08519 4548 aa8.99□□□□□ -0.97
NOP56-201ENST00000329276 J3QL48 77 aa8.9□□□□□ -0.99
NOP56-201ENST00000329276 LRP2P98164 4655 aa8.88□□□□□ -0.99
NOP56-201ENST00000329276 HERC1Q15751 4861 aa8.85□□□□□ -0.99
NOP56-201ENST00000329276 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
NOP56-201ENST00000329276 CAMK2N1Q7Z7J9 78 aa8.75□□□□□ -1.01
NOP56-201ENST00000329276 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
NOP56-201ENST00000329276 KRTAP23-1A1A580 65 aa8.64□□□□□ -1.03
NOP56-201ENST00000329276 MUC2Q02817 5179 aa8.61□□□□□ -1.03
NOP56-201ENST00000329276 SPRR5A0A1B0GTR4 108 aa8.57□□□□□ -1.04
NOP56-201ENST00000329276 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
NOP56-201ENST00000329276 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
NOP56-201ENST00000329276 TNP1P09430 55 aa8.54□□□□□ -1.04
NOP56-201ENST00000329276 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
NOP56-201ENST00000329276 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
NOP56-201ENST00000329276 UBR4Q5T4S7 5183 aa8.4□□□□□ -1.07
NOP56-201ENST00000329276 RNF213Q63HN8 5207 aa8.34□□□□□ -1.07
NOP56-201ENST00000329276 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
NOP56-201ENST00000329276 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
NOP56-201ENST00000329276 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
NOP56-201ENST00000329276 INE1O15225 51 aa8.03□□□□□ -1.12
NOP56-201ENST00000329276 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
NOP56-201ENST00000329276 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
NOP56-201ENST00000329276 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
NOP56-201ENST00000329276 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
NOP56-201ENST00000329276 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
NOP56-201ENST00000329276 M0R2T5 61 aa7.72□□□□□ -1.17
NOP56-201ENST00000329276 MT1HP80294 61 aa7.71□□□□□ -1.18
NOP56-201ENST00000329276 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
NOP56-201ENST00000329276 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
NOP56-201ENST00000329276 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
NOP56-201ENST00000329276 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
NOP56-201ENST00000329276 MT1FP04733 61 aa7.47□□□□□ -1.21
NOP56-201ENST00000329276 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
NOP56-201ENST00000329276 MT2AP02795 61 aa7.47□□□□□ -1.21
NOP56-201ENST00000329276 MT1XP80297 61 aa7.44□□□□□ -1.22
NOP56-201ENST00000329276 KRTAP9-8Q9BYQ0 159 aa7.42□□□□□ -1.22
NOP56-201ENST00000329276 MT1BP07438 61 aa7.36□□□□□ -1.23
NOP56-201ENST00000329276 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
NOP56-201ENST00000329276 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
NOP56-201ENST00000329276 USH2AO75445 5202 aa7.21□□□□□ -1.26
NOP56-201ENST00000329276 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
NOP56-201ENST00000329276 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
NOP56-201ENST00000329276 FSIP2Q5CZC0 6907 aa7.06□□□□□ -1.28
NOP56-201ENST00000329276 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
NOP56-201ENST00000329276 LCE2BO14633 110 aa7□□□□□ -1.29
NOP56-201ENST00000329276 KRTAP2-3P0C7H8 128 aa6.92□□□□□ -1.3
NOP56-201ENST00000329276 KRTAP2-4Q9BYR9 128 aa6.92□□□□□ -1.3
NOP56-201ENST00000329276 KRTAP2-1Q9BYU5 128 aa6.92□□□□□ -1.3
NOP56-201ENST00000329276 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
NOP56-201ENST00000329276 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
NOP56-201ENST00000329276 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
NOP56-201ENST00000329276 KMT2DO14686 5537 aa6.68□□□□□ -1.34
NOP56-201ENST00000329276 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
NOP56-201ENST00000329276 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
NOP56-201ENST00000329276 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
NOP56-201ENST00000329276 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
NOP56-201ENST00000329276 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
NOP56-201ENST00000329276 MT1LQ93083 61 aa6.48□□□□□ -1.37
NOP56-201ENST00000329276 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms