RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SPRR2GQ9BYE4 73 aa10.46□□□□□ -0.73
TMEM54-201ENST00000329151 CYP4F30PQ9H0H9 118 aa10.45□□□□□ -0.74
TMEM54-201ENST00000329151 LOC101927531A0A1B0GV80 90 aa10.43□□□□□ -0.74
TMEM54-201ENST00000329151 KRTAP19-8Q3LI54 63 aa10.43□□□□□ -0.74
TMEM54-201ENST00000329151 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
TMEM54-201ENST00000329151 H0Y9P7 68 aa10.4□□□□□ -0.74
TMEM54-201ENST00000329151 MUC12Q9UKN1 5478 aa10.4□□□□□ -0.75
TMEM54-201ENST00000329151 ATOX1O00244 68 aa10.39□□□□□ -0.75
TMEM54-201ENST00000329151 IMUPQ9GZP8 106 aa10.39□□□□□ -0.75
TMEM54-201ENST00000329151 KRTAP10-5P60370 271 aa10.36□□□□□ -0.75
TMEM54-201ENST00000329151 K7ERU9 68 aa10.33□□□□□ -0.76
TMEM54-201ENST00000329151 OCR1Q9BZK8 76 aa10.33□□□□□ -0.76
TMEM54-201ENST00000329151 CRIPTQ9P021 101 aa10.29□□□□□ -0.76
TMEM54-201ENST00000329151 KRTAP20-1Q3LI63 56 aa10.27□□□□□ -0.77
TMEM54-201ENST00000329151 MP68P56378 58 aa10.26□□□□□ -0.77
TMEM54-201ENST00000329151 LINC00208Q96KT6 92 aa10.26□□□□□ -0.77
TMEM54-201ENST00000329151 SCGB1A1P11684 91 aa10.24□□□□□ -0.77
TMEM54-201ENST00000329151 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
TMEM54-201ENST00000329151 MT-ATP8P03928 68 aa10.2□□□□□ -0.78
TMEM54-201ENST00000329151 KRTAP5-9P26371 169 aa10.16□□□□□ -0.78
TMEM54-201ENST00000329151 H3BPC8 53 aa10.13□□□□□ -0.79
TMEM54-201ENST00000329151 NDUFC1O43677 76 aa10.12□□□□□ -0.79
TMEM54-201ENST00000329151 KMT2DO14686 5537 aa10.1□□□□□ -0.79
TMEM54-201ENST00000329151 MDN1Q9NU22 5596 aa10.09□□□□□ -0.79
TMEM54-201ENST00000329151 A8MUN3 132 aa10.07□□□□□ -0.8
TMEM54-201ENST00000329151 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
TMEM54-201ENST00000329151 H0YAA0 97 aa10.01□□□□□ -0.81
TMEM54-201ENST00000329151 PRO2289Q9P1D8 64 aa10.01□□□□□ -0.81
TMEM54-201ENST00000329151 TRAV7A0A075B6U4 112 aa9.99□□□□□ -0.81
TMEM54-201ENST00000329151 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
TMEM54-201ENST00000329151 PLAC4Q8WY50 150 aa9.91□□□□□ -0.82
TMEM54-201ENST00000329151 SPRR2FQ96RM1 72 aa9.9□□□□□ -0.82
TMEM54-201ENST00000329151 KRTAP2-3P0C7H8 128 aa9.89□□□□□ -0.83
TMEM54-201ENST00000329151 KRTAP2-4Q9BYR9 128 aa9.89□□□□□ -0.83
TMEM54-201ENST00000329151 DMAC1Q96GE9 116 aa9.88□□□□□ -0.83
TMEM54-201ENST00000329151 SPRR2EP22531 72 aa9.84□□□□□ -0.83
TMEM54-201ENST00000329151 SPRR2BP35325 72 aa9.84□□□□□ -0.83
TMEM54-201ENST00000329151 SPRR2AP35326 72 aa9.84□□□□□ -0.83
TMEM54-201ENST00000329151 R4GN34 69 aa9.8□□□□□ -0.84
TMEM54-201ENST00000329151 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
TMEM54-201ENST00000329151 KRTAP8-1Q8IUC2 63 aa9.77□□□□□ -0.85
TMEM54-201ENST00000329151 SNURFQ9Y675 71 aa9.76□□□□□ -0.85
TMEM54-201ENST00000329151 MT1XP80297 61 aa9.75□□□□□ -0.85
TMEM54-201ENST00000329151 SERP2Q8N6R1 65 aa9.75□□□□□ -0.85
TMEM54-201ENST00000329151 ACYP2P14621 99 aa9.71□□□□□ -0.86
TMEM54-201ENST00000329151 M0QZ58 72 aa9.68□□□□□ -0.86
TMEM54-201ENST00000329151 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
TMEM54-201ENST00000329151 P0C880 135 aa9.6□□□□□ -0.87
TMEM54-201ENST00000329151 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
TMEM54-201ENST00000329151 SPANXA2-OT1Q8N9U9 137 aa9.59□□□□□ -0.87
TMEM54-201ENST00000329151 LCE1AQ5T7P2 110 aa9.56□□□□□ -0.88
TMEM54-201ENST00000329151 SPTSSBQ8NFR3 76 aa9.55□□□□□ -0.88
TMEM54-201ENST00000329151 KRTAP2-2Q9BYT5 123 aa9.55□□□□□ -0.88
TMEM54-201ENST00000329151 KRTAP2-1Q9BYU5 128 aa9.55□□□□□ -0.88
TMEM54-201ENST00000329151 CHKB-CPT1BH3BT56 60 aa9.54□□□□□ -0.88
TMEM54-201ENST00000329151 COX7CP15954 63 aa9.52□□□□□ -0.89
TMEM54-201ENST00000329151 SPRR2DP22532 72 aa9.52□□□□□ -0.89
TMEM54-201ENST00000329151 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
TMEM54-201ENST00000329151 KRTAP4-8A0A0G2JLE6 195 aa9.44□□□□□ -0.9
TMEM54-201ENST00000329151 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
TMEM54-201ENST00000329151 ANAPC13Q9BS18 74 aa9.33□□□□□ -0.92
TMEM54-201ENST00000329151 CYSTM1Q9H1C7 97 aa9.32□□□□□ -0.92
TMEM54-201ENST00000329151 H7BZZ5 65 aa9.31□□□□□ -0.92
TMEM54-201ENST00000329151 KRTAP10-7P60409 375 aaPredicted RBP9.31□□□□□ -0.92
TMEM54-201ENST00000329151 COA5Q86WW8 74 aa9.31□□□□□ -0.92
TMEM54-201ENST00000329151 KRTAP10-12P60413 245 aa9.27□□□□□ -0.93
TMEM54-201ENST00000329151 LCE3BQ5TA77 95 aa9.27□□□□□ -0.93
TMEM54-201ENST00000329151 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
TMEM54-201ENST00000329151 SEC61GP60059 68 aa9.07□□□□□ -0.96
TMEM54-201ENST00000329151 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
TMEM54-201ENST00000329151 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
TMEM54-201ENST00000329151 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
TMEM54-201ENST00000329151 ATP5EP56381 51 aaPredicted RBP8.95□□□□□ -0.98
TMEM54-201ENST00000329151 A0A1B0GU33 70 aa8.87□□□□□ -0.99
TMEM54-201ENST00000329151 A0A1B0GU69 56 aa8.84□□□□□ -0.99
TMEM54-201ENST00000329151 TMEM258P61165 79 aa8.81□□□□□ -1
TMEM54-201ENST00000329151 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
TMEM54-201ENST00000329151 A0A0D9SG42 100 aa8.79□□□□□ -1
TMEM54-201ENST00000329151 GPR98Q8WXG9 6306 aa8.77□□□□□ -1.01
TMEM54-201ENST00000329151 DSTQ03001 7570 aaKnown RBP8.77□□□□□ -1.01
TMEM54-201ENST00000329151 LCE5AQ5TCM9 118 aa8.73□□□□□ -1.01
TMEM54-201ENST00000329151 KRTAP19-3Q7Z4W3 81 aa8.71□□□□□ -1.02
TMEM54-201ENST00000329151 KRTAP19-7Q3SYF9 63 aa8.7□□□□□ -1.02
TMEM54-201ENST00000329151 MT1EP04732 61 aa8.68□□□□□ -1.02
TMEM54-201ENST00000329151 KRTAP4-9Q9BYQ8 210 aa8.67□□□□□ -1.02
TMEM54-201ENST00000329151 PRR15LQ9BU68 103 aa8.66□□□□□ -1.02
TMEM54-201ENST00000329151 SPINT4Q6UDR6 99 aa8.65□□□□□ -1.02
TMEM54-201ENST00000329151 SMIM26A0A096LP01 95 aa8.63□□□□□ -1.03
TMEM54-201ENST00000329151 LINC01558Q9Y6Z2 57 aa8.63□□□□□ -1.03
TMEM54-201ENST00000329151 KRTAP12-1P59990 96 aa8.6□□□□□ -1.03
TMEM54-201ENST00000329151 A8MU10 97 aa8.54□□□□□ -1.04
TMEM54-201ENST00000329151 PP632Q6XCG6 107 aa8.52□□□□□ -1.05
TMEM54-201ENST00000329151 MT1GP13640 62 aa8.48□□□□□ -1.05
TMEM54-201ENST00000329151 KRTAP19-5Q3LI72 72 aa8.47□□□□□ -1.05
TMEM54-201ENST00000329151 LCE1DQ5T752 114 aa8.42□□□□□ -1.06
TMEM54-201ENST00000329151 UQCR11O14957 56 aa8.37□□□□□ -1.07
TMEM54-201ENST00000329151 LCE4AQ5TA78 99 aa8.37□□□□□ -1.07
TMEM54-201ENST00000329151 MT4P47944 62 aa8.35□□□□□ -1.07
TMEM54-201ENST00000329151 HMCN1Q96RW7 5635 aa8.31□□□□□ -1.08
TMEM54-201ENST00000329151 MT1MQ8N339 61 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms