RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
CAPN12-201ENST00000328867 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.78
CAPN12-201ENST00000328867 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
CAPN12-201ENST00000328867 S4R3F8 94 aa10.19□□□□□ -0.78
CAPN12-201ENST00000328867 SMR3BP02814 79 aaPredicted RBP10.14□□□□□ -0.79
CAPN12-201ENST00000328867 A0A1B0GVY2 172 aa10.12□□□□□ -0.79
CAPN12-201ENST00000328867 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
CAPN12-201ENST00000328867 KRTAP12-2P59991 146 aa10.08□□□□□ -0.8
CAPN12-201ENST00000328867 APOBP04114 4563 aaKnown RBP10.07□□□□□ -0.8
CAPN12-201ENST00000328867 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
CAPN12-201ENST00000328867 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
CAPN12-201ENST00000328867 FAT1Q14517 4588 aa10.02□□□□□ -0.81
CAPN12-201ENST00000328867 XP32Q5T750 250 aa10.01□□□□□ -0.81
CAPN12-201ENST00000328867 KRTAP12-1P59990 96 aa9.98□□□□□ -0.81
CAPN12-201ENST00000328867 A0A0A0MQY5 61 aa9.95□□□□□ -0.82
CAPN12-201ENST00000328867 RYR2Q92736 4967 aa9.93□□□□□ -0.82
CAPN12-201ENST00000328867 KRTAP10-8P60410 259 aa9.83□□□□□ -0.84
CAPN12-201ENST00000328867 M0QZ58 72 aa9.8□□□□□ -0.84
CAPN12-201ENST00000328867 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
CAPN12-201ENST00000328867 FAT3Q8TDW7 4589 aa9.72□□□□□ -0.85
CAPN12-201ENST00000328867 LUZP6Q538Z0 58 aa9.7□□□□□ -0.86
CAPN12-201ENST00000328867 TNXBP22105 4242 aa9.69□□□□□ -0.86
CAPN12-201ENST00000328867 LRP1Q07954 4544 aaKnown RBP9.67□□□□□ -0.86
CAPN12-201ENST00000328867 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
CAPN12-201ENST00000328867 Q5VSD8 79 aa9.64□□□□□ -0.87
CAPN12-201ENST00000328867 HSPG2P98160 4391 aa9.6□□□□□ -0.87
CAPN12-201ENST00000328867 RYR1P21817 5038 aa9.52□□□□□ -0.89
CAPN12-201ENST00000328867 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
CAPN12-201ENST00000328867 RYR3Q15413 4870 aa9.44□□□□□ -0.9
CAPN12-201ENST00000328867 MT1HL1P0DM35 61 aa9.4□□□□□ -0.91
CAPN12-201ENST00000328867 R4GN34 69 aa9.38□□□□□ -0.91
CAPN12-201ENST00000328867 MYCBP2O75592 4640 aa9.36□□□□□ -0.91
CAPN12-201ENST00000328867 PP632Q6XCG6 107 aa9.31□□□□□ -0.92
CAPN12-201ENST00000328867 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
CAPN12-201ENST00000328867 LRP2P98164 4655 aa9.09□□□□□ -0.95
CAPN12-201ENST00000328867 EPPK1P58107 5090 aaKnown RBP9.08□□□□□ -0.96
CAPN12-201ENST00000328867 LPAP08519 4548 aa9.06□□□□□ -0.96
CAPN12-201ENST00000328867 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
CAPN12-201ENST00000328867 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
CAPN12-201ENST00000328867 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.97
CAPN12-201ENST00000328867 ABCA13Q86UQ4 5058 aa8.92□□□□□ -0.98
CAPN12-201ENST00000328867 SPRR5A0A1B0GTR4 108 aa8.89□□□□□ -0.99
CAPN12-201ENST00000328867 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
CAPN12-201ENST00000328867 KRTAP23-1A1A580 65 aa8.84□□□□□ -1
CAPN12-201ENST00000328867 TNP1P09430 55 aa8.77□□□□□ -1.01
CAPN12-201ENST00000328867 MUC17Q685J3 4493 aa8.76□□□□□ -1.01
CAPN12-201ENST00000328867 J3QL48 77 aa8.75□□□□□ -1.01
CAPN12-201ENST00000328867 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
CAPN12-201ENST00000328867 HERC2O95714 4834 aa8.63□□□□□ -1.03
CAPN12-201ENST00000328867 PRO2289Q9P1D8 64 aa8.62□□□□□ -1.03
CAPN12-201ENST00000328867 KRTAP19-2Q3LHN2 52 aa8.59□□□□□ -1.03
CAPN12-201ENST00000328867 INE1O15225 51 aa8.43□□□□□ -1.06
CAPN12-201ENST00000328867 BIRC6Q9NR09 4857 aa8.43□□□□□ -1.06
CAPN12-201ENST00000328867 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
CAPN12-201ENST00000328867 MUC2Q02817 5179 aa8.24□□□□□ -1.09
CAPN12-201ENST00000328867 HERC1Q15751 4861 aa8.21□□□□□ -1.1
CAPN12-201ENST00000328867 HMCN2Q8NDA2 5059 aa8.19□□□□□ -1.1
CAPN12-201ENST00000328867 LCE3AQ5TA76 89 aa8.16□□□□□ -1.1
CAPN12-201ENST00000328867 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
CAPN12-201ENST00000328867 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
CAPN12-201ENST00000328867 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
CAPN12-201ENST00000328867 KRTAP8-1Q8IUC2 63 aa7.99□□□□□ -1.13
CAPN12-201ENST00000328867 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
CAPN12-201ENST00000328867 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
CAPN12-201ENST00000328867 MT1HP80294 61 aa7.85□□□□□ -1.15
CAPN12-201ENST00000328867 M0R2T5 61 aa7.82□□□□□ -1.16
CAPN12-201ENST00000328867 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
CAPN12-201ENST00000328867 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
CAPN12-201ENST00000328867 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
CAPN12-201ENST00000328867 MT2AP02795 61 aa7.72□□□□□ -1.17
CAPN12-201ENST00000328867 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.18
CAPN12-201ENST00000328867 MT1FP04733 61 aa7.71□□□□□ -1.18
CAPN12-201ENST00000328867 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
CAPN12-201ENST00000328867 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
CAPN12-201ENST00000328867 KRTAP19-8Q3LI54 63 aa7.59□□□□□ -1.2
CAPN12-201ENST00000328867 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
CAPN12-201ENST00000328867 MT1XP80297 61 aa7.53□□□□□ -1.2
CAPN12-201ENST00000328867 MT1BP07438 61 aa7.46□□□□□ -1.21
CAPN12-201ENST00000328867 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
CAPN12-201ENST00000328867 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
CAPN12-201ENST00000328867 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
CAPN12-201ENST00000328867 KRTAP19-5Q3LI72 72 aa7.19□□□□□ -1.26
CAPN12-201ENST00000328867 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
CAPN12-201ENST00000328867 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
CAPN12-201ENST00000328867 KRTAP2-1Q9BYU5 128 aa7.14□□□□□ -1.27
CAPN12-201ENST00000328867 KRTAP9-6A8MVA2 160 aa7.09□□□□□ -1.27
CAPN12-201ENST00000328867 LCE2BO14633 110 aa7.05□□□□□ -1.28
CAPN12-201ENST00000328867 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
CAPN12-201ENST00000328867 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
CAPN12-201ENST00000328867 USH2AO75445 5202 aa6.76□□□□□ -1.33
CAPN12-201ENST00000328867 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
CAPN12-201ENST00000328867 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
CAPN12-201ENST00000328867 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
CAPN12-201ENST00000328867 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
CAPN12-201ENST00000328867 KMT2DO14686 5537 aa6.64□□□□□ -1.35
CAPN12-201ENST00000328867 MT1LQ93083 61 aa6.57□□□□□ -1.36
CAPN12-201ENST00000328867 SSPOA2VEC9 5147 aa6.5□□□□□ -1.37
CAPN12-201ENST00000328867 MT1EP04732 61 aa6.46□□□□□ -1.37
CAPN12-201ENST00000328867 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
CAPN12-201ENST00000328867 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms