RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 TNP1P09430 55 aa8.15□□□□□ -1.1
LMNB2-201ENST00000325327 KMT2AQ03164 3969 aa8.15□□□□□ -1.1
LMNB2-201ENST00000325327 H0YAA0 97 aa8.13□□□□□ -1.11
LMNB2-201ENST00000325327 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
LMNB2-201ENST00000325327 HYDINQ4G0P3 5121 aa8.04□□□□□ -1.12
LMNB2-201ENST00000325327 DNAH17Q9UFH2 4485 aa7.98□□□□□ -1.13
LMNB2-201ENST00000325327 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.14
LMNB2-201ENST00000325327 SACSQ9NZJ4 4579 aa7.95□□□□□ -1.14
LMNB2-201ENST00000325327 DNAH2Q9P225 4427 aa7.95□□□□□ -1.14
LMNB2-201ENST00000325327 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
LMNB2-201ENST00000325327 PRO2289Q9P1D8 64 aa7.94□□□□□ -1.14
LMNB2-201ENST00000325327 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
LMNB2-201ENST00000325327 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
LMNB2-201ENST00000325327 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
LMNB2-201ENST00000325327 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
LMNB2-201ENST00000325327 FAT3Q8TDW7 4589 aa7.87□□□□□ -1.15
LMNB2-201ENST00000325327 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
LMNB2-201ENST00000325327 NDUFAF8A1L188 74 aa7.84□□□□□ -1.16
LMNB2-201ENST00000325327 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
LMNB2-201ENST00000325327 KMT2CQ8NEZ4 4911 aaKnown RBP7.82□□□□□ -1.16
LMNB2-201ENST00000325327 CMYA5Q8N3K9 4069 aa7.81□□□□□ -1.16
LMNB2-201ENST00000325327 HERC2O95714 4834 aa7.81□□□□□ -1.16
LMNB2-201ENST00000325327 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
LMNB2-201ENST00000325327 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
LMNB2-201ENST00000325327 RYR2Q92736 4967 aa7.8□□□□□ -1.16
LMNB2-201ENST00000325327 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
LMNB2-201ENST00000325327 DNAH3Q8TD57 4116 aa7.78□□□□□ -1.16
LMNB2-201ENST00000325327 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
LMNB2-201ENST00000325327 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
LMNB2-201ENST00000325327 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
LMNB2-201ENST00000325327 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
LMNB2-201ENST00000325327 KRTAP12-1P59990 96 aa7.69□□□□□ -1.18
LMNB2-201ENST00000325327 DNAH6Q9C0G6 4158 aa7.67□□□□□ -1.18
LMNB2-201ENST00000325327 DNAH7Q8WXX0 4024 aa7.66□□□□□ -1.18
LMNB2-201ENST00000325327 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
LMNB2-201ENST00000325327 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
LMNB2-201ENST00000325327 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
LMNB2-201ENST00000325327 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
LMNB2-201ENST00000325327 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
LMNB2-201ENST00000325327 LRP2P98164 4655 aa7.49□□□□□ -1.21
LMNB2-201ENST00000325327 EPPK1P58107 5090 aaKnown RBP7.46□□□□□ -1.21
LMNB2-201ENST00000325327 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
LMNB2-201ENST00000325327 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
LMNB2-201ENST00000325327 MT1HP80294 61 aa7.4□□□□□ -1.22
LMNB2-201ENST00000325327 HECTD4Q9Y4D8 3996 aa7.38□□□□□ -1.23
LMNB2-201ENST00000325327 HSPG2P98160 4391 aa7.38□□□□□ -1.23
LMNB2-201ENST00000325327 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
LMNB2-201ENST00000325327 MT2AP02795 61 aa7.22□□□□□ -1.25
LMNB2-201ENST00000325327 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
LMNB2-201ENST00000325327 PKD1P98161 4303 aa7.15□□□□□ -1.27
LMNB2-201ENST00000325327 MT1FP04733 61 aa7.13□□□□□ -1.27
LMNB2-201ENST00000325327 HERC1Q15751 4861 aa7.13□□□□□ -1.27
LMNB2-201ENST00000325327 LPAP08519 4548 aa7.1□□□□□ -1.27
LMNB2-201ENST00000325327 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.28
LMNB2-201ENST00000325327 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
LMNB2-201ENST00000325327 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
LMNB2-201ENST00000325327 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
LMNB2-201ENST00000325327 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
LMNB2-201ENST00000325327 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
LMNB2-201ENST00000325327 KRTAP8-1Q8IUC2 63 aa6.89□□□□□ -1.31
LMNB2-201ENST00000325327 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
LMNB2-201ENST00000325327 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
LMNB2-201ENST00000325327 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
LMNB2-201ENST00000325327 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
LMNB2-201ENST00000325327 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.33
LMNB2-201ENST00000325327 MUC2Q02817 5179 aa6.68□□□□□ -1.34
LMNB2-201ENST00000325327 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
LMNB2-201ENST00000325327 TNXBP22105 4242 aa6.66□□□□□ -1.34
LMNB2-201ENST00000325327 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
LMNB2-201ENST00000325327 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
LMNB2-201ENST00000325327 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
LMNB2-201ENST00000325327 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
LMNB2-201ENST00000325327 KRTAP19-8Q3LI54 63 aa6.51□□□□□ -1.37
LMNB2-201ENST00000325327 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
LMNB2-201ENST00000325327 MT1BP07438 61 aa6.49□□□□□ -1.37
LMNB2-201ENST00000325327 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
LMNB2-201ENST00000325327 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
LMNB2-201ENST00000325327 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
LMNB2-201ENST00000325327 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
LMNB2-201ENST00000325327 LCE2BO14633 110 aa6.39□□□□□ -1.39
LMNB2-201ENST00000325327 MT1XP80297 61 aa6.38□□□□□ -1.39
LMNB2-201ENST00000325327 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
LMNB2-201ENST00000325327 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
LMNB2-201ENST00000325327 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.4
LMNB2-201ENST00000325327 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.4
LMNB2-201ENST00000325327 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
LMNB2-201ENST00000325327 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
LMNB2-201ENST00000325327 SPRR2EP22531 72 aa6.18□□□□□ -1.42
LMNB2-201ENST00000325327 SPRR2BP35325 72 aa6.18□□□□□ -1.42
LMNB2-201ENST00000325327 SPRR2AP35326 72 aa6.18□□□□□ -1.42
LMNB2-201ENST00000325327 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
LMNB2-201ENST00000325327 INE1O15225 51 aa6.07□□□□□ -1.44
LMNB2-201ENST00000325327 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
LMNB2-201ENST00000325327 SPRR2DP22532 72 aa5.95□□□□□ -1.46
LMNB2-201ENST00000325327 OBSCNQ5VST9 7968 aa5.93□□□□□ -1.46
LMNB2-201ENST00000325327 USH2AO75445 5202 aa5.91□□□□□ -1.46
LMNB2-201ENST00000325327 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
LMNB2-201ENST00000325327 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
LMNB2-201ENST00000325327 MT1GP13640 62 aa5.87□□□□□ -1.47
LMNB2-201ENST00000325327 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms