RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 KMT2AQ03164 3969 aa3.54□□□□□ -1.84
PSEN1-201ENST00000324501 FAT1Q14517 4588 aa3.53□□□□□ -1.84
PSEN1-201ENST00000324501 DNAH10Q8IVF4 4471 aa3.52□□□□□ -1.85
PSEN1-201ENST00000324501 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
PSEN1-201ENST00000324501 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
PSEN1-201ENST00000324501 RYR3Q15413 4870 aa3.51□□□□□ -1.85
PSEN1-201ENST00000324501 DNAH11Q96DT5 4516 aa3.5□□□□□ -1.85
PSEN1-201ENST00000324501 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
PSEN1-201ENST00000324501 DNAH3Q8TD57 4116 aa3.48□□□□□ -1.85
PSEN1-201ENST00000324501 RYR1P21817 5038 aa3.47□□□□□ -1.85
PSEN1-201ENST00000324501 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
PSEN1-201ENST00000324501 DNAH7Q8WXX0 4024 aa3.46□□□□□ -1.86
PSEN1-201ENST00000324501 FRAS1Q86XX4 4008 aa3.44□□□□□ -1.86
PSEN1-201ENST00000324501 MYCBP2O75592 4640 aa3.44□□□□□ -1.86
PSEN1-201ENST00000324501 VPS13DQ5THJ4 4388 aa3.44□□□□□ -1.86
PSEN1-201ENST00000324501 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
PSEN1-201ENST00000324501 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
PSEN1-201ENST00000324501 DNAH5Q8TE73 4624 aa3.42□□□□□ -1.86
PSEN1-201ENST00000324501 KRTAP13-4Q3LI77 160 aa3.41□□□□□ -1.86
PSEN1-201ENST00000324501 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
PSEN1-201ENST00000324501 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
PSEN1-201ENST00000324501 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.87
PSEN1-201ENST00000324501 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
PSEN1-201ENST00000324501 SACSQ9NZJ4 4579 aa3.37□□□□□ -1.87
PSEN1-201ENST00000324501 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
PSEN1-201ENST00000324501 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
PSEN1-201ENST00000324501 DYNC2H1Q8NCM8 4307 aaKnown RBP3.36□□□□□ -1.87
PSEN1-201ENST00000324501 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
PSEN1-201ENST00000324501 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
PSEN1-201ENST00000324501 HERC2O95714 4834 aa3.35□□□□□ -1.87
PSEN1-201ENST00000324501 FAT2Q9NYQ8 4349 aa3.34□□□□□ -1.87
PSEN1-201ENST00000324501 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.87
PSEN1-201ENST00000324501 KRTAP3-3Q9BYR6 98 aa3.34□□□□□ -1.87
PSEN1-201ENST00000324501 RYR2Q92736 4967 aa3.34□□□□□ -1.87
PSEN1-201ENST00000324501 APOBP04114 4563 aaKnown RBP3.33□□□□□ -1.88
PSEN1-201ENST00000324501 VPS13BQ7Z7G8 4022 aa3.32□□□□□ -1.88
PSEN1-201ENST00000324501 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
PSEN1-201ENST00000324501 DNAH8Q96JB1 4490 aa3.31□□□□□ -1.88
PSEN1-201ENST00000324501 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
PSEN1-201ENST00000324501 HERC1Q15751 4861 aa3.29□□□□□ -1.88
PSEN1-201ENST00000324501 LRP2P98164 4655 aa3.29□□□□□ -1.88
PSEN1-201ENST00000324501 KRTAP3-2Q9BYR7 98 aa3.28□□□□□ -1.88
PSEN1-201ENST00000324501 ABCA13Q86UQ4 5058 aa3.25□□□□□ -1.89
PSEN1-201ENST00000324501 LORP23490 312 aaPredicted RBP3.24□□□□□ -1.89
PSEN1-201ENST00000324501 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
PSEN1-201ENST00000324501 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
PSEN1-201ENST00000324501 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
PSEN1-201ENST00000324501 HECTD4Q9Y4D8 3996 aa3.21□□□□□ -1.9
PSEN1-201ENST00000324501 MUC2Q02817 5179 aa3.2□□□□□ -1.9
PSEN1-201ENST00000324501 HSPG2P98160 4391 aa3.19□□□□□ -1.9
PSEN1-201ENST00000324501 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
PSEN1-201ENST00000324501 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
PSEN1-201ENST00000324501 KRTAP10-12P60413 245 aa3.15□□□□□ -1.9
PSEN1-201ENST00000324501 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.9
PSEN1-201ENST00000324501 MT1HP80294 61 aa3.13□□□□□ -1.91
PSEN1-201ENST00000324501 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
PSEN1-201ENST00000324501 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
PSEN1-201ENST00000324501 PKD1P98161 4303 aa3.08□□□□□ -1.92
PSEN1-201ENST00000324501 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
PSEN1-201ENST00000324501 LPAP08519 4548 aa3.04□□□□□ -1.92
PSEN1-201ENST00000324501 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
PSEN1-201ENST00000324501 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
PSEN1-201ENST00000324501 MT2AP02795 61 aa3.02□□□□□ -1.93
PSEN1-201ENST00000324501 MT1FP04733 61 aa3□□□□□ -1.93
PSEN1-201ENST00000324501 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
PSEN1-201ENST00000324501 TNXBP22105 4242 aa2.95□□□□□ -1.94
PSEN1-201ENST00000324501 INE1O15225 51 aa2.92□□□□□ -1.94
PSEN1-201ENST00000324501 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
PSEN1-201ENST00000324501 PKHD1L1Q86WI1 4243 aa2.91□□□□□ -1.94
PSEN1-201ENST00000324501 HMCN2Q8NDA2 5059 aa2.89□□□□□ -1.95
PSEN1-201ENST00000324501 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
PSEN1-201ENST00000324501 USH2AO75445 5202 aa2.84□□□□□ -1.96
PSEN1-201ENST00000324501 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
PSEN1-201ENST00000324501 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
PSEN1-201ENST00000324501 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
PSEN1-201ENST00000324501 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
PSEN1-201ENST00000324501 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
PSEN1-201ENST00000324501 KRTAP19-1Q8IUB9 90 aa2.77□□□□□ -1.97
PSEN1-201ENST00000324501 LCE2DQ5TA82 110 aaPredicted RBP2.77□□□□□ -1.97
PSEN1-201ENST00000324501 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
PSEN1-201ENST00000324501 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
PSEN1-201ENST00000324501 MUC17Q685J3 4493 aa2.76□□□□□ -1.97
PSEN1-201ENST00000324501 SPRR2EP22531 72 aa2.75□□□□□ -1.97
PSEN1-201ENST00000324501 SPRR2BP35325 72 aa2.75□□□□□ -1.97
PSEN1-201ENST00000324501 SPRR2AP35326 72 aa2.75□□□□□ -1.97
PSEN1-201ENST00000324501 MT1XP80297 61 aa2.72□□□□□ -1.97
PSEN1-201ENST00000324501 MT1BP07438 61 aa2.71□□□□□ -1.98
PSEN1-201ENST00000324501 SPRR2DP22532 72 aa2.69□□□□□ -1.98
PSEN1-201ENST00000324501 KRTAP9-6A0A140TA67 174 aa2.69□□□□□ -1.98
PSEN1-201ENST00000324501 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
PSEN1-201ENST00000324501 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
PSEN1-201ENST00000324501 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
PSEN1-201ENST00000324501 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
PSEN1-201ENST00000324501 KRTAP4-8A0A0G2JLE6 195 aa2.68□□□□□ -1.98
PSEN1-201ENST00000324501 KRTAP4-8Q9BYQ9 185 aa2.68□□□□□ -1.98
PSEN1-201ENST00000324501 LCE2BO14633 110 aa2.66□□□□□ -1.98
PSEN1-201ENST00000324501 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
PSEN1-201ENST00000324501 FLGP20930 4061 aaPredicted RBP2.6□□□□□ -1.99
PSEN1-201ENST00000324501 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
PSEN1-201ENST00000324501 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms