RNA–Protein interactions for RNA: ENST00000323557.11

FBXO9-202, Transcript of F-box protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO9, Length 3,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO9-202ENST00000323557 S4R3F8 94 aa6.11□□□□□ -1.43
FBXO9-202ENST00000323557 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
FBXO9-202ENST00000323557 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
FBXO9-202ENST00000323557 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
FBXO9-202ENST00000323557 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
FBXO9-202ENST00000323557 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
FBXO9-202ENST00000323557 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
FBXO9-202ENST00000323557 RYR1P21817 5038 aa6.03□□□□□ -1.44
FBXO9-202ENST00000323557 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
FBXO9-202ENST00000323557 XP32Q5T750 250 aa6□□□□□ -1.45
FBXO9-202ENST00000323557 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
FBXO9-202ENST00000323557 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
FBXO9-202ENST00000323557 HSPG2P98160 4391 aa5.98□□□□□ -1.45
FBXO9-202ENST00000323557 VPS13BQ7Z7G8 4022 aa5.98□□□□□ -1.45
FBXO9-202ENST00000323557 C9orf92A6NGG3 77 aa5.97□□□□□ -1.45
FBXO9-202ENST00000323557 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
FBXO9-202ENST00000323557 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
FBXO9-202ENST00000323557 Q6ZRN7 208 aaPredicted RBP5.95□□□□□ -1.46
FBXO9-202ENST00000323557 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
FBXO9-202ENST00000323557 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
FBXO9-202ENST00000323557 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
FBXO9-202ENST00000323557 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.47
FBXO9-202ENST00000323557 J3QL48 77 aa5.85□□□□□ -1.47
FBXO9-202ENST00000323557 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.47
FBXO9-202ENST00000323557 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
FBXO9-202ENST00000323557 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
FBXO9-202ENST00000323557 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
FBXO9-202ENST00000323557 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
FBXO9-202ENST00000323557 KRTAP10-2P60368 255 aa5.78□□□□□ -1.48
FBXO9-202ENST00000323557 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
FBXO9-202ENST00000323557 KRTAP10-1P60331 282 aa5.7□□□□□ -1.5
FBXO9-202ENST00000323557 Q5VSD8 79 aa5.67□□□□□ -1.5
FBXO9-202ENST00000323557 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
FBXO9-202ENST00000323557 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.5
FBXO9-202ENST00000323557 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
FBXO9-202ENST00000323557 FAT1Q14517 4588 aa5.62□□□□□ -1.51
FBXO9-202ENST00000323557 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
FBXO9-202ENST00000323557 HERC1Q15751 4861 aa5.58□□□□□ -1.52
FBXO9-202ENST00000323557 M0QZ58 72 aa5.58□□□□□ -1.52
FBXO9-202ENST00000323557 R4GN34 69 aa5.55□□□□□ -1.52
FBXO9-202ENST00000323557 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
FBXO9-202ENST00000323557 TNXBP22105 4242 aa5.5□□□□□ -1.53
FBXO9-202ENST00000323557 RPS29P62273 56 aaKnown RBP5.49□□□□□ -1.53
FBXO9-202ENST00000323557 SMR3BP02814 79 aaPredicted RBP5.48□□□□□ -1.53
FBXO9-202ENST00000323557 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
FBXO9-202ENST00000323557 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
FBXO9-202ENST00000323557 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
FBXO9-202ENST00000323557 INE1O15225 51 aa5.33□□□□□ -1.56
FBXO9-202ENST00000323557 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
FBXO9-202ENST00000323557 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
FBXO9-202ENST00000323557 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
FBXO9-202ENST00000323557 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
FBXO9-202ENST00000323557 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
FBXO9-202ENST00000323557 LPAP08519 4548 aa5.14□□□□□ -1.59
FBXO9-202ENST00000323557 LRP2P98164 4655 aa5.12□□□□□ -1.59
FBXO9-202ENST00000323557 TNP1P09430 55 aa5.09□□□□□ -1.59
FBXO9-202ENST00000323557 LCE2BO14633 110 aa5.06□□□□□ -1.6
FBXO9-202ENST00000323557 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
FBXO9-202ENST00000323557 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
FBXO9-202ENST00000323557 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.62
FBXO9-202ENST00000323557 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
FBXO9-202ENST00000323557 MUC2Q02817 5179 aa4.79□□□□□ -1.64
FBXO9-202ENST00000323557 LCE2CQ5TA81 110 aa4.77□□□□□ -1.65
FBXO9-202ENST00000323557 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
FBXO9-202ENST00000323557 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
FBXO9-202ENST00000323557 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
FBXO9-202ENST00000323557 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.65
FBXO9-202ENST00000323557 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
FBXO9-202ENST00000323557 MT1HP80294 61 aa4.62□□□□□ -1.67
FBXO9-202ENST00000323557 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
FBXO9-202ENST00000323557 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
FBXO9-202ENST00000323557 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
FBXO9-202ENST00000323557 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
FBXO9-202ENST00000323557 KRTAP12-3P60328 96 aa4.46□□□□□ -1.69
FBXO9-202ENST00000323557 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
FBXO9-202ENST00000323557 M0R2T5 61 aa4.3□□□□□ -1.72
FBXO9-202ENST00000323557 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
FBXO9-202ENST00000323557 MT2AP02795 61 aa4.27□□□□□ -1.73
FBXO9-202ENST00000323557 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
FBXO9-202ENST00000323557 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
FBXO9-202ENST00000323557 USH2AO75445 5202 aa4.24□□□□□ -1.73
FBXO9-202ENST00000323557 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
FBXO9-202ENST00000323557 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
FBXO9-202ENST00000323557 KRTAP19-1Q8IUB9 90 aa4.24□□□□□ -1.73
FBXO9-202ENST00000323557 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
FBXO9-202ENST00000323557 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
FBXO9-202ENST00000323557 MT1FP04733 61 aa4.21□□□□□ -1.73
FBXO9-202ENST00000323557 SSPOA2VEC9 5147 aa4.21□□□□□ -1.74
FBXO9-202ENST00000323557 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
FBXO9-202ENST00000323557 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
FBXO9-202ENST00000323557 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
FBXO9-202ENST00000323557 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
FBXO9-202ENST00000323557 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
FBXO9-202ENST00000323557 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
FBXO9-202ENST00000323557 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
FBXO9-202ENST00000323557 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
FBXO9-202ENST00000323557 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
FBXO9-202ENST00000323557 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
FBXO9-202ENST00000323557 MT1XP80297 61 aa4.06□□□□□ -1.76
FBXO9-202ENST00000323557 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms