RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 H0Y9P7 68 aa9.6□□□□□ -0.87
UBE2D3-201ENST00000321805 KLKP1Q107X0 134 aa9.6□□□□□ -0.87
UBE2D3-201ENST00000321805 KRTAP19-8Q3LI54 63 aa9.58□□□□□ -0.88
UBE2D3-201ENST00000321805 Q5VV11 94 aa9.58□□□□□ -0.88
UBE2D3-201ENST00000321805 MT1BP07438 61 aa9.55□□□□□ -0.88
UBE2D3-201ENST00000321805 A0A087WVE0 104 aa9.53□□□□□ -0.88
UBE2D3-201ENST00000321805 CRIPTQ9P021 101 aa9.52□□□□□ -0.89
UBE2D3-201ENST00000321805 A8MUN3 132 aa9.51□□□□□ -0.89
UBE2D3-201ENST00000321805 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
UBE2D3-201ENST00000321805 NDUFC1O43677 76 aa9.48□□□□□ -0.89
UBE2D3-201ENST00000321805 A6NN06 94 aa9.47□□□□□ -0.89
UBE2D3-201ENST00000321805 KRTAP6-3Q3LI67 103 aa9.47□□□□□ -0.89
UBE2D3-201ENST00000321805 H0YAA0 97 aa9.45□□□□□ -0.9
UBE2D3-201ENST00000321805 A0A1B0GV90 55 aa9.43□□□□□ -0.9
UBE2D3-201ENST00000321805 MP68P56378 58 aa9.43□□□□□ -0.9
UBE2D3-201ENST00000321805 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
UBE2D3-201ENST00000321805 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
UBE2D3-201ENST00000321805 J3QR89 54 aa9.37□□□□□ -0.91
UBE2D3-201ENST00000321805 KRTAP10-5P60370 271 aa9.37□□□□□ -0.91
UBE2D3-201ENST00000321805 H3BPC8 53 aa9.33□□□□□ -0.92
UBE2D3-201ENST00000321805 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
UBE2D3-201ENST00000321805 SCGB1A1P11684 91 aa9.21□□□□□ -0.94
UBE2D3-201ENST00000321805 DMAC1Q96GE9 116 aa9.18□□□□□ -0.94
UBE2D3-201ENST00000321805 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
UBE2D3-201ENST00000321805 MUC12Q9UKN1 5478 aa9.09□□□□□ -0.95
UBE2D3-201ENST00000321805 NEBP20929 6669 aa9.08□□□□□ -0.96
UBE2D3-201ENST00000321805 R4GN34 69 aa9.07□□□□□ -0.96
UBE2D3-201ENST00000321805 KRTAP5-9P26371 169 aa9.05□□□□□ -0.96
UBE2D3-201ENST00000321805 PRO2289Q9P1D8 64 aa9.05□□□□□ -0.96
UBE2D3-201ENST00000321805 P0C880 135 aa9.03□□□□□ -0.96
UBE2D3-201ENST00000321805 TRAV7A0A075B6U4 112 aa9.02□□□□□ -0.97
UBE2D3-201ENST00000321805 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
UBE2D3-201ENST00000321805 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
UBE2D3-201ENST00000321805 KRTAP4-8Q9BYQ9 185 aa9.02□□□□□ -0.97
UBE2D3-201ENST00000321805 K7ERU9 68 aa8.97□□□□□ -0.97
UBE2D3-201ENST00000321805 M0QZ58 72 aa8.96□□□□□ -0.98
UBE2D3-201ENST00000321805 MT1XP80297 61 aa8.96□□□□□ -0.98
UBE2D3-201ENST00000321805 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
UBE2D3-201ENST00000321805 ACYP2P14621 99 aa8.95□□□□□ -0.98
UBE2D3-201ENST00000321805 KMT2DO14686 5537 aa8.92□□□□□ -0.98
UBE2D3-201ENST00000321805 SPTSSBQ8NFR3 76 aa8.89□□□□□ -0.99
UBE2D3-201ENST00000321805 MDN1Q9NU22 5596 aa8.84□□□□□ -0.99
UBE2D3-201ENST00000321805 KRTAP12-2P59991 146 aa8.81□□□□□ -1
UBE2D3-201ENST00000321805 LINC01554Q52M75 96 aa8.8□□□□□ -1
UBE2D3-201ENST00000321805 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1.01
UBE2D3-201ENST00000321805 KRTAP20-1Q3LI63 56 aa8.75□□□□□ -1.01
UBE2D3-201ENST00000321805 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
UBE2D3-201ENST00000321805 SNURFQ9Y675 71 aa8.73□□□□□ -1.01
UBE2D3-201ENST00000321805 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
UBE2D3-201ENST00000321805 KRTAP4-12Q9BQ66 201 aa8.72□□□□□ -1.01
UBE2D3-201ENST00000321805 KRTAP8-1Q8IUC2 63 aa8.7□□□□□ -1.02
UBE2D3-201ENST00000321805 SERP2Q8N6R1 65 aa8.65□□□□□ -1.02
UBE2D3-201ENST00000321805 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
UBE2D3-201ENST00000321805 SPRR2EP22531 72 aa8.6□□□□□ -1.03
UBE2D3-201ENST00000321805 SPRR2BP35325 72 aa8.6□□□□□ -1.03
UBE2D3-201ENST00000321805 SPRR2AP35326 72 aa8.6□□□□□ -1.03
UBE2D3-201ENST00000321805 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
UBE2D3-201ENST00000321805 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
UBE2D3-201ENST00000321805 KRTAP10-12P60413 245 aa8.53□□□□□ -1.04
UBE2D3-201ENST00000321805 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
UBE2D3-201ENST00000321805 KRTAP10-7P60409 375 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-201ENST00000321805 LCE1AQ5T7P2 110 aa8.49□□□□□ -1.05
UBE2D3-201ENST00000321805 H3BS24 57 aa8.47□□□□□ -1.05
UBE2D3-201ENST00000321805 KRTAP9-9Q9BYP9 154 aa8.44□□□□□ -1.06
UBE2D3-201ENST00000321805 KRTAP9-4Q9BYQ2 154 aa8.44□□□□□ -1.06
UBE2D3-201ENST00000321805 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
UBE2D3-201ENST00000321805 COA5Q86WW8 74 aa8.42□□□□□ -1.06
UBE2D3-201ENST00000321805 COX7CP15954 63 aa8.36□□□□□ -1.07
UBE2D3-201ENST00000321805 SEC61GP60059 68 aa8.33□□□□□ -1.08
UBE2D3-201ENST00000321805 SPRR2DP22532 72 aa8.32□□□□□ -1.08
UBE2D3-201ENST00000321805 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
UBE2D3-201ENST00000321805 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
UBE2D3-201ENST00000321805 KRTAP2-2Q9BYT5 123 aa8.27□□□□□ -1.09
UBE2D3-201ENST00000321805 KRTAP2-1Q9BYU5 128 aa8.27□□□□□ -1.09
UBE2D3-201ENST00000321805 H7BZZ5 65 aa8.24□□□□□ -1.09
UBE2D3-201ENST00000321805 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
UBE2D3-201ENST00000321805 A0A1B0GU33 70 aa8.16□□□□□ -1.1
UBE2D3-201ENST00000321805 A0A0D9SG42 100 aa8.14□□□□□ -1.11
UBE2D3-201ENST00000321805 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
UBE2D3-201ENST00000321805 LCE4AQ5TA78 99 aa8.06□□□□□ -1.12
UBE2D3-201ENST00000321805 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
UBE2D3-201ENST00000321805 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
UBE2D3-201ENST00000321805 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
UBE2D3-201ENST00000321805 ANAPC13Q9BS18 74 aa8.02□□□□□ -1.13
UBE2D3-201ENST00000321805 A0A1B0GU69 56 aa8.01□□□□□ -1.13
UBE2D3-201ENST00000321805 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
UBE2D3-201ENST00000321805 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
UBE2D3-201ENST00000321805 SMIM26A0A096LP01 95 aa7.96□□□□□ -1.14
UBE2D3-201ENST00000321805 MT1EP04732 61 aa7.94□□□□□ -1.14
UBE2D3-201ENST00000321805 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
UBE2D3-201ENST00000321805 LCE5AQ5TCM9 118 aa7.93□□□□□ -1.14
UBE2D3-201ENST00000321805 KRTAP19-3Q7Z4W3 81 aa7.9□□□□□ -1.14
UBE2D3-201ENST00000321805 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-201ENST00000321805 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
UBE2D3-201ENST00000321805 A8MU10 97 aa7.81□□□□□ -1.16
UBE2D3-201ENST00000321805 PRR15LQ9BU68 103 aa7.8□□□□□ -1.16
UBE2D3-201ENST00000321805 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
UBE2D3-201ENST00000321805 KRTAP19-5Q3LI72 72 aa7.78□□□□□ -1.16
UBE2D3-201ENST00000321805 DSTQ03001 7570 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-201ENST00000321805 MT1GP13640 62 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms