RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 A0A1B0GU33 70 aa10.86□□□□□ -0.67
ZNF48-201ENST00000320159 Q5VSD8 79 aa10.86□□□□□ -0.67
ZNF48-201ENST00000320159 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
ZNF48-201ENST00000320159 LRP2P98164 4655 aa10.8□□□□□ -0.68
ZNF48-201ENST00000320159 A0A0D9SG42 100 aa10.79□□□□□ -0.68
ZNF48-201ENST00000320159 RYR1P21817 5038 aa10.78□□□□□ -0.68
ZNF48-201ENST00000320159 COX6B2Q6YFQ2 88 aa10.76□□□□□ -0.69
ZNF48-201ENST00000320159 H1FX-AS1Q4G0G2 97 aa10.74□□□□□ -0.69
ZNF48-201ENST00000320159 EPPK1P58107 5090 aaKnown RBP10.71□□□□□ -0.7
ZNF48-201ENST00000320159 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
ZNF48-201ENST00000320159 XP32Q5T750 250 aa10.65□□□□□ -0.7
ZNF48-201ENST00000320159 LINC01554Q52M75 96 aa10.63□□□□□ -0.71
ZNF48-201ENST00000320159 KRTAP21-3Q3LHN1 58 aa10.6□□□□□ -0.71
ZNF48-201ENST00000320159 KRTAP13-4Q3LI77 160 aa10.6□□□□□ -0.71
ZNF48-201ENST00000320159 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
ZNF48-201ENST00000320159 RPL37P61927 97 aaKnown RBP10.55□□□□□ -0.72
ZNF48-201ENST00000320159 P0C880 135 aa10.53□□□□□ -0.72
ZNF48-201ENST00000320159 KRTAP10-6P60371 365 aaPredicted RBP10.5□□□□□ -0.73
ZNF48-201ENST00000320159 S4R3F8 94 aa10.49□□□□□ -0.73
ZNF48-201ENST00000320159 H3BS24 57 aa10.43□□□□□ -0.74
ZNF48-201ENST00000320159 MT1HL1P0DM35 61 aa10.43□□□□□ -0.74
ZNF48-201ENST00000320159 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
ZNF48-201ENST00000320159 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
ZNF48-201ENST00000320159 K7ERS5 55 aa10.38□□□□□ -0.75
ZNF48-201ENST00000320159 MUC2Q02817 5179 aa10.34□□□□□ -0.75
ZNF48-201ENST00000320159 KRTAP25-1Q3LHN0 102 aa10.34□□□□□ -0.75
ZNF48-201ENST00000320159 C10orf95Q9H7T3 257 aa10.34□□□□□ -0.75
ZNF48-201ENST00000320159 SPINT4Q6UDR6 99 aa10.32□□□□□ -0.76
ZNF48-201ENST00000320159 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
ZNF48-201ENST00000320159 ROMO1P60602 79 aa10.19□□□□□ -0.78
ZNF48-201ENST00000320159 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
ZNF48-201ENST00000320159 HERC2O95714 4834 aa10.05□□□□□ -0.8
ZNF48-201ENST00000320159 KRTAP12-1P59990 96 aa10□□□□□ -0.81
ZNF48-201ENST00000320159 M0QZ58 72 aa9.97□□□□□ -0.81
ZNF48-201ENST00000320159 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
ZNF48-201ENST00000320159 KRTAP4-1Q9BYQ7 146 aa9.94□□□□□ -0.82
ZNF48-201ENST00000320159 J3QL48 77 aa9.9□□□□□ -0.83
ZNF48-201ENST00000320159 MUC17Q685J3 4493 aa9.87□□□□□ -0.83
ZNF48-201ENST00000320159 HERC1Q15751 4861 aa9.87□□□□□ -0.83
ZNF48-201ENST00000320159 R4GN34 69 aa9.86□□□□□ -0.83
ZNF48-201ENST00000320159 FAT4Q6V0I7 4981 aa9.8□□□□□ -0.84
ZNF48-201ENST00000320159 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
ZNF48-201ENST00000320159 RNF213Q63HN8 5207 aa9.66□□□□□ -0.86
ZNF48-201ENST00000320159 PCLOQ9Y6V0 5065 aa9.64□□□□□ -0.87
ZNF48-201ENST00000320159 NDUFAF8A1L188 74 aa9.52□□□□□ -0.88
ZNF48-201ENST00000320159 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
ZNF48-201ENST00000320159 KRTAP19-2Q3LHN2 52 aa9.41□□□□□ -0.9
ZNF48-201ENST00000320159 KRTAP15-1Q3LI76 137 aa9.4□□□□□ -0.91
ZNF48-201ENST00000320159 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
ZNF48-201ENST00000320159 BIRC6Q9NR09 4857 aa9.36□□□□□ -0.91
ZNF48-201ENST00000320159 FLGP20930 4061 aaPredicted RBP9.32□□□□□ -0.92
ZNF48-201ENST00000320159 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
ZNF48-201ENST00000320159 M0R2T5 61 aa9.15□□□□□ -0.94
ZNF48-201ENST00000320159 PLAC4Q8WY50 150 aa9.12□□□□□ -0.95
ZNF48-201ENST00000320159 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
ZNF48-201ENST00000320159 TNP1P09430 55 aa8.85□□□□□ -0.99
ZNF48-201ENST00000320159 KRTAP10-10P60014 251 aa8.81□□□□□ -1
ZNF48-201ENST00000320159 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
ZNF48-201ENST00000320159 MT1HP80294 61 aa8.75□□□□□ -1.01
ZNF48-201ENST00000320159 MT1FP04733 61 aa8.72□□□□□ -1.01
ZNF48-201ENST00000320159 USH2AO75445 5202 aa8.7□□□□□ -1.02
ZNF48-201ENST00000320159 PP632Q6XCG6 107 aa8.69□□□□□ -1.02
ZNF48-201ENST00000320159 LUZP6Q538Z0 58 aa8.67□□□□□ -1.02
ZNF48-201ENST00000320159 MT2AP02795 61 aa8.63□□□□□ -1.03
ZNF48-201ENST00000320159 A0A0A0MQY5 61 aa8.61□□□□□ -1.03
ZNF48-201ENST00000320159 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
ZNF48-201ENST00000320159 LCE3AQ5TA76 89 aa8.58□□□□□ -1.04
ZNF48-201ENST00000320159 KMT2DO14686 5537 aa8.52□□□□□ -1.05
ZNF48-201ENST00000320159 KRTAP9-8Q9BYQ0 159 aa8.51□□□□□ -1.05
ZNF48-201ENST00000320159 MT1BP07438 61 aa8.31□□□□□ -1.08
ZNF48-201ENST00000320159 KRTAP10-5P60370 271 aa8.27□□□□□ -1.09
ZNF48-201ENST00000320159 MT1XP80297 61 aa8.26□□□□□ -1.09
ZNF48-201ENST00000320159 FSIP2Q5CZC0 6907 aa8.26□□□□□ -1.09
ZNF48-201ENST00000320159 KRTAP10-7P60409 375 aaPredicted RBP8.23□□□□□ -1.09
ZNF48-201ENST00000320159 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
ZNF48-201ENST00000320159 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
ZNF48-201ENST00000320159 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
ZNF48-201ENST00000320159 SPRR5A0A1B0GTR4 108 aa8.11□□□□□ -1.11
ZNF48-201ENST00000320159 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
ZNF48-201ENST00000320159 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
ZNF48-201ENST00000320159 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
ZNF48-201ENST00000320159 LCE2BO14633 110 aa7.97□□□□□ -1.13
ZNF48-201ENST00000320159 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
ZNF48-201ENST00000320159 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
ZNF48-201ENST00000320159 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
ZNF48-201ENST00000320159 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
ZNF48-201ENST00000320159 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
ZNF48-201ENST00000320159 SSPOA2VEC9 5147 aa7.61□□□□□ -1.19
ZNF48-201ENST00000320159 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
ZNF48-201ENST00000320159 LCE3CQ5T5A8 94 aa7.5□□□□□ -1.21
ZNF48-201ENST00000320159 DSTQ03001 7570 aaKnown RBP7.49□□□□□ -1.21
ZNF48-201ENST00000320159 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
ZNF48-201ENST00000320159 MUC12Q9UKN1 5478 aa7.47□□□□□ -1.21
ZNF48-201ENST00000320159 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
ZNF48-201ENST00000320159 KRTAP19-7Q3SYF9 63 aa7.35□□□□□ -1.23
ZNF48-201ENST00000320159 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
ZNF48-201ENST00000320159 CRCT1Q9UGL9 99 aa7.18□□□□□ -1.26
ZNF48-201ENST00000320159 LOC100996750A0A140TA64 210 aa7.14□□□□□ -1.27
ZNF48-201ENST00000320159 MT1LQ93083 61 aa7.11□□□□□ -1.27
ZNF48-201ENST00000320159 MT1EP04732 61 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms