RNA–Protein interactions for RNA: ENST00000317040.11

MVB12A-201, Transcript of multivesicular body subunit 12A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MVB12A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-201ENST00000317040 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
MVB12A-201ENST00000317040 HERC2O95714 4834 aa10.16□□□□□ -0.78
MVB12A-201ENST00000317040 P0C880 135 aa10.14□□□□□ -0.79
MVB12A-201ENST00000317040 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
MVB12A-201ENST00000317040 Q5VSD8 79 aa10.13□□□□□ -0.79
MVB12A-201ENST00000317040 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
MVB12A-201ENST00000317040 C9orf92A6NGG3 77 aa10.09□□□□□ -0.79
MVB12A-201ENST00000317040 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
MVB12A-201ENST00000317040 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
MVB12A-201ENST00000317040 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
MVB12A-201ENST00000317040 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
MVB12A-201ENST00000317040 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
MVB12A-201ENST00000317040 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
MVB12A-201ENST00000317040 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
MVB12A-201ENST00000317040 MYCBP2O75592 4640 aa9.92□□□□□ -0.82
MVB12A-201ENST00000317040 KRTAP13-4Q3LI77 160 aa9.9□□□□□ -0.83
MVB12A-201ENST00000317040 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.83
MVB12A-201ENST00000317040 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
MVB12A-201ENST00000317040 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
MVB12A-201ENST00000317040 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
MVB12A-201ENST00000317040 LRP1Q07954 4544 aaKnown RBP9.86□□□□□ -0.83
MVB12A-201ENST00000317040 KRTAP15-1Q3LI76 137 aa9.85□□□□□ -0.83
MVB12A-201ENST00000317040 A0A0D9SG42 100 aa9.81□□□□□ -0.84
MVB12A-201ENST00000317040 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
MVB12A-201ENST00000317040 S4R3F8 94 aa9.76□□□□□ -0.85
MVB12A-201ENST00000317040 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
MVB12A-201ENST00000317040 DMBT1Q9UGM3 2413 aaPredicted RBP9.7□□□□□ -0.86
MVB12A-201ENST00000317040 NDUFAF8A1L188 74 aa9.68□□□□□ -0.86
MVB12A-201ENST00000317040 TNXBP22105 4242 aa9.68□□□□□ -0.86
MVB12A-201ENST00000317040 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
MVB12A-201ENST00000317040 KRTAP10-8P60410 259 aa9.66□□□□□ -0.86
MVB12A-201ENST00000317040 KRTAP12-2P59991 146 aa9.64□□□□□ -0.87
MVB12A-201ENST00000317040 J3QL48 77 aa9.63□□□□□ -0.87
MVB12A-201ENST00000317040 XP32Q5T750 250 aa9.62□□□□□ -0.87
MVB12A-201ENST00000317040 KRTAP12-1P59990 96 aa9.6□□□□□ -0.87
MVB12A-201ENST00000317040 HERC1Q15751 4861 aa9.54□□□□□ -0.88
MVB12A-201ENST00000317040 M0QZ58 72 aa9.54□□□□□ -0.88
MVB12A-201ENST00000317040 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
MVB12A-201ENST00000317040 PLAC4Q8WY50 150 aa9.16□□□□□ -0.94
MVB12A-201ENST00000317040 LPAP08519 4548 aa9.15□□□□□ -0.94
MVB12A-201ENST00000317040 LRP2P98164 4655 aa9.14□□□□□ -0.95
MVB12A-201ENST00000317040 A0A0A0MQY5 61 aa9.06□□□□□ -0.96
MVB12A-201ENST00000317040 R4GN34 69 aa9.06□□□□□ -0.96
MVB12A-201ENST00000317040 PP632Q6XCG6 107 aa9.02□□□□□ -0.97
MVB12A-201ENST00000317040 LUZP6Q538Z0 58 aa8.97□□□□□ -0.97
MVB12A-201ENST00000317040 UBR4Q5T4S7 5183 aa8.97□□□□□ -0.97
MVB12A-201ENST00000317040 RNF213Q63HN8 5207 aa8.78□□□□□ -1
MVB12A-201ENST00000317040 MUC2Q02817 5179 aa8.77□□□□□ -1.01
MVB12A-201ENST00000317040 SEC61BP60468 96 aaKnown RBP8.75□□□□□ -1.01
MVB12A-201ENST00000317040 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
MVB12A-201ENST00000317040 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
MVB12A-201ENST00000317040 KRTAP23-1A1A580 65 aa8.67□□□□□ -1.02
MVB12A-201ENST00000317040 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.03
MVB12A-201ENST00000317040 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.03
MVB12A-201ENST00000317040 SPRR5A0A1B0GTR4 108 aa8.57□□□□□ -1.04
MVB12A-201ENST00000317040 TNP1P09430 55 aa8.47□□□□□ -1.05
MVB12A-201ENST00000317040 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
MVB12A-201ENST00000317040 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
MVB12A-201ENST00000317040 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
MVB12A-201ENST00000317040 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
MVB12A-201ENST00000317040 FLGP20930 4061 aaPredicted RBP8.2□□□□□ -1.1
MVB12A-201ENST00000317040 MT1HP80294 61 aa8.18□□□□□ -1.1
MVB12A-201ENST00000317040 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
MVB12A-201ENST00000317040 M0R2T5 61 aa8.06□□□□□ -1.12
MVB12A-201ENST00000317040 INE1O15225 51 aa8.01□□□□□ -1.13
MVB12A-201ENST00000317040 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
MVB12A-201ENST00000317040 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
MVB12A-201ENST00000317040 KRTAP9-8Q9BYQ0 159 aa7.82□□□□□ -1.16
MVB12A-201ENST00000317040 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
MVB12A-201ENST00000317040 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
MVB12A-201ENST00000317040 MT2AP02795 61 aa7.74□□□□□ -1.17
MVB12A-201ENST00000317040 MT1FP04733 61 aa7.69□□□□□ -1.18
MVB12A-201ENST00000317040 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
MVB12A-201ENST00000317040 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
MVB12A-201ENST00000317040 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
MVB12A-201ENST00000317040 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
MVB12A-201ENST00000317040 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
MVB12A-201ENST00000317040 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
MVB12A-201ENST00000317040 FSIP2Q5CZC0 6907 aa7.46□□□□□ -1.22
MVB12A-201ENST00000317040 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
MVB12A-201ENST00000317040 LCE2BO14633 110 aa7.43□□□□□ -1.22
MVB12A-201ENST00000317040 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
MVB12A-201ENST00000317040 MT1XP80297 61 aa7.39□□□□□ -1.23
MVB12A-201ENST00000317040 USH2AO75445 5202 aa7.37□□□□□ -1.23
MVB12A-201ENST00000317040 MT1BP07438 61 aa7.32□□□□□ -1.24
MVB12A-201ENST00000317040 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
MVB12A-201ENST00000317040 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
MVB12A-201ENST00000317040 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
MVB12A-201ENST00000317040 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
MVB12A-201ENST00000317040 LCE3CQ5T5A8 94 aa7.12□□□□□ -1.27
MVB12A-201ENST00000317040 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
MVB12A-201ENST00000317040 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
MVB12A-201ENST00000317040 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
MVB12A-201ENST00000317040 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
MVB12A-201ENST00000317040 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
MVB12A-201ENST00000317040 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
MVB12A-201ENST00000317040 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
MVB12A-201ENST00000317040 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
MVB12A-201ENST00000317040 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
MVB12A-201ENST00000317040 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms