RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 CMYA5Q8N3K9 4069 aa4.31□□□□□ -1.72
BDNF-201ENST00000314915 HUWE1Q7Z6Z7 4374 aaKnown RBP4.3□□□□□ -1.72
BDNF-201ENST00000314915 DNAH11Q96DT5 4516 aa4.29□□□□□ -1.72
BDNF-201ENST00000314915 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
BDNF-201ENST00000314915 Q5VSD8 79 aa4.27□□□□□ -1.73
BDNF-201ENST00000314915 DNAH3Q8TD57 4116 aa4.21□□□□□ -1.74
BDNF-201ENST00000314915 DYNC2H1Q8NCM8 4307 aaKnown RBP4.18□□□□□ -1.74
BDNF-201ENST00000314915 PRKDCP78527 4128 aaKnown RBP4.18□□□□□ -1.74
BDNF-201ENST00000314915 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.75
BDNF-201ENST00000314915 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
BDNF-201ENST00000314915 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
BDNF-201ENST00000314915 KMT2AQ03164 3969 aa4.13□□□□□ -1.75
BDNF-201ENST00000314915 TNP1P09430 55 aa4.11□□□□□ -1.75
BDNF-201ENST00000314915 DNAH2Q9P225 4427 aa4.1□□□□□ -1.75
BDNF-201ENST00000314915 HECTD4Q9Y4D8 3996 aa4.09□□□□□ -1.75
BDNF-201ENST00000314915 DNAH7Q8WXX0 4024 aa4.08□□□□□ -1.76
BDNF-201ENST00000314915 A0A1B0GVY2 172 aa4.04□□□□□ -1.76
BDNF-201ENST00000314915 LRP1BQ9NZR2 4599 aa4.02□□□□□ -1.77
BDNF-201ENST00000314915 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
BDNF-201ENST00000314915 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
BDNF-201ENST00000314915 STARD9Q9P2P6 4700 aa3.97□□□□□ -1.77
BDNF-201ENST00000314915 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
BDNF-201ENST00000314915 DNAH5Q8TE73 4624 aa3.9□□□□□ -1.79
BDNF-201ENST00000314915 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
BDNF-201ENST00000314915 RYR3Q15413 4870 aa3.86□□□□□ -1.79
BDNF-201ENST00000314915 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
BDNF-201ENST00000314915 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
BDNF-201ENST00000314915 KRTAP10-4P60372 401 aaPredicted RBP3.85□□□□□ -1.79
BDNF-201ENST00000314915 KIAA1109Q2LD37 5005 aa3.85□□□□□ -1.79
BDNF-201ENST00000314915 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.8
BDNF-201ENST00000314915 RYR2Q92736 4967 aa3.83□□□□□ -1.8
BDNF-201ENST00000314915 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
BDNF-201ENST00000314915 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
BDNF-201ENST00000314915 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
BDNF-201ENST00000314915 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
BDNF-201ENST00000314915 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
BDNF-201ENST00000314915 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.8
BDNF-201ENST00000314915 PKD1P98161 4303 aa3.77□□□□□ -1.81
BDNF-201ENST00000314915 FAT1Q14517 4588 aa3.74□□□□□ -1.81
BDNF-201ENST00000314915 FAT2Q9NYQ8 4349 aa3.73□□□□□ -1.81
BDNF-201ENST00000314915 PKHD1P08F94 4074 aa3.72□□□□□ -1.81
BDNF-201ENST00000314915 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.82
BDNF-201ENST00000314915 RYR1P21817 5038 aa3.69□□□□□ -1.82
BDNF-201ENST00000314915 HERC2O95714 4834 aa3.67□□□□□ -1.82
BDNF-201ENST00000314915 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
BDNF-201ENST00000314915 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.82
BDNF-201ENST00000314915 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
BDNF-201ENST00000314915 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
BDNF-201ENST00000314915 TNXBP22105 4242 aa3.64□□□□□ -1.83
BDNF-201ENST00000314915 HSPG2P98160 4391 aa3.63□□□□□ -1.83
BDNF-201ENST00000314915 M0R2T5 61 aa3.61□□□□□ -1.83
BDNF-201ENST00000314915 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
BDNF-201ENST00000314915 MT1HL1P0DM35 61 aa3.59□□□□□ -1.84
BDNF-201ENST00000314915 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
BDNF-201ENST00000314915 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
BDNF-201ENST00000314915 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
BDNF-201ENST00000314915 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
BDNF-201ENST00000314915 LRP2P98164 4655 aa3.5□□□□□ -1.85
BDNF-201ENST00000314915 HERC1Q15751 4861 aa3.48□□□□□ -1.85
BDNF-201ENST00000314915 LPAP08519 4548 aa3.44□□□□□ -1.86
BDNF-201ENST00000314915 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
BDNF-201ENST00000314915 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
BDNF-201ENST00000314915 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
BDNF-201ENST00000314915 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
BDNF-201ENST00000314915 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
BDNF-201ENST00000314915 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
BDNF-201ENST00000314915 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.88
BDNF-201ENST00000314915 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
BDNF-201ENST00000314915 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
BDNF-201ENST00000314915 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
BDNF-201ENST00000314915 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
BDNF-201ENST00000314915 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
BDNF-201ENST00000314915 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
BDNF-201ENST00000314915 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
BDNF-201ENST00000314915 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
BDNF-201ENST00000314915 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
BDNF-201ENST00000314915 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
BDNF-201ENST00000314915 LCE2AQ5TA79 106 aaPredicted RBP3.18□□□□□ -1.9
BDNF-201ENST00000314915 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
BDNF-201ENST00000314915 MUC2Q02817 5179 aa3.16□□□□□ -1.9
BDNF-201ENST00000314915 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
BDNF-201ENST00000314915 LCE2BO14633 110 aa3.14□□□□□ -1.91
BDNF-201ENST00000314915 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
BDNF-201ENST00000314915 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
BDNF-201ENST00000314915 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
BDNF-201ENST00000314915 LCE2CQ5TA81 110 aa3.1□□□□□ -1.91
BDNF-201ENST00000314915 LOC100996750A0A140TA64 210 aa3.09□□□□□ -1.91
BDNF-201ENST00000314915 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
BDNF-201ENST00000314915 MT1XP80297 61 aa3.09□□□□□ -1.91
BDNF-201ENST00000314915 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
BDNF-201ENST00000314915 MT1FP04733 61 aa3.07□□□□□ -1.92
BDNF-201ENST00000314915 MT2AP02795 61 aa3.06□□□□□ -1.92
BDNF-201ENST00000314915 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
BDNF-201ENST00000314915 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
BDNF-201ENST00000314915 MT1HP80294 61 aa3.05□□□□□ -1.92
BDNF-201ENST00000314915 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
BDNF-201ENST00000314915 MT1BP07438 61 aa3.01□□□□□ -1.93
BDNF-201ENST00000314915 LCE1EQ5T753 118 aa3□□□□□ -1.93
BDNF-201ENST00000314915 PRM1P04553 51 aa2.93□□□□□ -1.94
BDNF-201ENST00000314915 KRTAP9-8Q9BYQ0 159 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms