RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 DNAH8Q96JB1 4490 aa4.76□□□□□ -1.65
C2CD3-201ENST00000313663 SACSQ9NZJ4 4579 aa4.75□□□□□ -1.65
C2CD3-201ENST00000313663 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
C2CD3-201ENST00000313663 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
C2CD3-201ENST00000313663 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
C2CD3-201ENST00000313663 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
C2CD3-201ENST00000313663 A0A1B0GVY2 172 aa4.73□□□□□ -1.65
C2CD3-201ENST00000313663 FAT2Q9NYQ8 4349 aa4.73□□□□□ -1.65
C2CD3-201ENST00000313663 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
C2CD3-201ENST00000313663 RYR2Q92736 4967 aa4.72□□□□□ -1.65
C2CD3-201ENST00000313663 PKD1P98161 4303 aa4.7□□□□□ -1.66
C2CD3-201ENST00000313663 DYNC1H1Q14204 4646 aaKnown RBP4.7□□□□□ -1.66
C2CD3-201ENST00000313663 FRAS1Q86XX4 4008 aa4.7□□□□□ -1.66
C2CD3-201ENST00000313663 KMT2CQ8NEZ4 4911 aaKnown RBP4.69□□□□□ -1.66
C2CD3-201ENST00000313663 PKHD1P08F94 4074 aa4.64□□□□□ -1.67
C2CD3-201ENST00000313663 FAT1Q14517 4588 aa4.61□□□□□ -1.67
C2CD3-201ENST00000313663 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
C2CD3-201ENST00000313663 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
C2CD3-201ENST00000313663 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
C2CD3-201ENST00000313663 P0C880 135 aa4.59□□□□□ -1.67
C2CD3-201ENST00000313663 APOBP04114 4563 aaKnown RBP4.57□□□□□ -1.68
C2CD3-201ENST00000313663 RYR3Q15413 4870 aa4.56□□□□□ -1.68
C2CD3-201ENST00000313663 H0YAA0 97 aa4.54□□□□□ -1.68
C2CD3-201ENST00000313663 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
C2CD3-201ENST00000313663 RYR1P21817 5038 aa4.51□□□□□ -1.69
C2CD3-201ENST00000313663 EPPK1P58107 5090 aaKnown RBP4.42□□□□□ -1.7
C2CD3-201ENST00000313663 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
C2CD3-201ENST00000313663 HSPG2P98160 4391 aa4.4□□□□□ -1.7
C2CD3-201ENST00000313663 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
C2CD3-201ENST00000313663 MT1HL1P0DM35 61 aa4.35□□□□□ -1.71
C2CD3-201ENST00000313663 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
C2CD3-201ENST00000313663 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.71
C2CD3-201ENST00000313663 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
C2CD3-201ENST00000313663 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
C2CD3-201ENST00000313663 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
C2CD3-201ENST00000313663 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
C2CD3-201ENST00000313663 TNXBP22105 4242 aa4.27□□□□□ -1.73
C2CD3-201ENST00000313663 ABCA13Q86UQ4 5058 aa4.25□□□□□ -1.73
C2CD3-201ENST00000313663 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
C2CD3-201ENST00000313663 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
C2CD3-201ENST00000313663 HERC2O95714 4834 aa4.23□□□□□ -1.73
C2CD3-201ENST00000313663 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
C2CD3-201ENST00000313663 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
C2CD3-201ENST00000313663 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
C2CD3-201ENST00000313663 LRP2P98164 4655 aa4.12□□□□□ -1.75
C2CD3-201ENST00000313663 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
C2CD3-201ENST00000313663 PCLOQ9Y6V0 5065 aa4.06□□□□□ -1.76
C2CD3-201ENST00000313663 LPAP08519 4548 aa4.03□□□□□ -1.76
C2CD3-201ENST00000313663 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
C2CD3-201ENST00000313663 KRTAP3-3Q9BYR6 98 aa4.01□□□□□ -1.77
C2CD3-201ENST00000313663 HERC1Q15751 4861 aa3.99□□□□□ -1.77
C2CD3-201ENST00000313663 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
C2CD3-201ENST00000313663 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
C2CD3-201ENST00000313663 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
C2CD3-201ENST00000313663 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
C2CD3-201ENST00000313663 INE1O15225 51 aa3.9□□□□□ -1.79
C2CD3-201ENST00000313663 MUC2Q02817 5179 aa3.87□□□□□ -1.79
C2CD3-201ENST00000313663 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
C2CD3-201ENST00000313663 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
C2CD3-201ENST00000313663 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
C2CD3-201ENST00000313663 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
C2CD3-201ENST00000313663 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
C2CD3-201ENST00000313663 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
C2CD3-201ENST00000313663 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
C2CD3-201ENST00000313663 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
C2CD3-201ENST00000313663 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
C2CD3-201ENST00000313663 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
C2CD3-201ENST00000313663 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
C2CD3-201ENST00000313663 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
C2CD3-201ENST00000313663 MT1HP80294 61 aa3.65□□□□□ -1.82
C2CD3-201ENST00000313663 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
C2CD3-201ENST00000313663 MT2AP02795 61 aa3.55□□□□□ -1.84
C2CD3-201ENST00000313663 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
C2CD3-201ENST00000313663 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
C2CD3-201ENST00000313663 MT1FP04733 61 aa3.53□□□□□ -1.84
C2CD3-201ENST00000313663 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
C2CD3-201ENST00000313663 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
C2CD3-201ENST00000313663 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
C2CD3-201ENST00000313663 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
C2CD3-201ENST00000313663 KRTAP19-8Q3LI54 63 aa3.41□□□□□ -1.86
C2CD3-201ENST00000313663 LCE2AQ5TA79 106 aaPredicted RBP3.4□□□□□ -1.86
C2CD3-201ENST00000313663 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
C2CD3-201ENST00000313663 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
C2CD3-201ENST00000313663 MT1BP07438 61 aa3.36□□□□□ -1.87
C2CD3-201ENST00000313663 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
C2CD3-201ENST00000313663 LCE2BO14633 110 aa3.28□□□□□ -1.88
C2CD3-201ENST00000313663 MT1XP80297 61 aa3.28□□□□□ -1.88
C2CD3-201ENST00000313663 SPRR2EP22531 72 aa3.27□□□□□ -1.89
C2CD3-201ENST00000313663 SPRR2BP35325 72 aa3.27□□□□□ -1.89
C2CD3-201ENST00000313663 SPRR2AP35326 72 aa3.27□□□□□ -1.89
C2CD3-201ENST00000313663 USH2AO75445 5202 aa3.26□□□□□ -1.89
C2CD3-201ENST00000313663 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
C2CD3-201ENST00000313663 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
C2CD3-201ENST00000313663 SPRR2DP22532 72 aa3.17□□□□□ -1.9
C2CD3-201ENST00000313663 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
C2CD3-201ENST00000313663 MT1GP13640 62 aa3.14□□□□□ -1.91
C2CD3-201ENST00000313663 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
C2CD3-201ENST00000313663 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
C2CD3-201ENST00000313663 LCE2DQ5TA82 110 aaPredicted RBP3.03□□□□□ -1.92
C2CD3-201ENST00000313663 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms