RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 HSPG2P98160 4391 aa7.93□□□□□ -1.14
CGGBP1-201ENST00000309534 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
CGGBP1-201ENST00000309534 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.14
CGGBP1-201ENST00000309534 PKHD1L1Q86WI1 4243 aa7.86□□□□□ -1.15
CGGBP1-201ENST00000309534 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
CGGBP1-201ENST00000309534 A0A0D9SG42 100 aa7.75□□□□□ -1.17
CGGBP1-201ENST00000309534 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
CGGBP1-201ENST00000309534 M0R2T5 61 aa7.74□□□□□ -1.17
CGGBP1-201ENST00000309534 M0QZ58 72 aa7.74□□□□□ -1.17
CGGBP1-201ENST00000309534 R4GN34 69 aa7.74□□□□□ -1.17
CGGBP1-201ENST00000309534 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
CGGBP1-201ENST00000309534 BIRC6Q9NR09 4857 aa7.7□□□□□ -1.18
CGGBP1-201ENST00000309534 A8MU10 97 aa7.69□□□□□ -1.18
CGGBP1-201ENST00000309534 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
CGGBP1-201ENST00000309534 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
CGGBP1-201ENST00000309534 TNXBP22105 4242 aa7.65□□□□□ -1.18
CGGBP1-201ENST00000309534 H0YAA0 97 aa7.65□□□□□ -1.18
CGGBP1-201ENST00000309534 LINC01554Q52M75 96 aa7.65□□□□□ -1.19
CGGBP1-201ENST00000309534 EPPK1P58107 5090 aaKnown RBP7.62□□□□□ -1.19
CGGBP1-201ENST00000309534 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
CGGBP1-201ENST00000309534 A6NN06 94 aa7.58□□□□□ -1.2
CGGBP1-201ENST00000309534 P0C880 135 aa7.55□□□□□ -1.2
CGGBP1-201ENST00000309534 MYCBP2O75592 4640 aa7.51□□□□□ -1.21
CGGBP1-201ENST00000309534 HERC2O95714 4834 aa7.5□□□□□ -1.21
CGGBP1-201ENST00000309534 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
CGGBP1-201ENST00000309534 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
CGGBP1-201ENST00000309534 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
CGGBP1-201ENST00000309534 ROMO1P60602 79 aa7.44□□□□□ -1.22
CGGBP1-201ENST00000309534 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
CGGBP1-201ENST00000309534 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
CGGBP1-201ENST00000309534 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
CGGBP1-201ENST00000309534 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
CGGBP1-201ENST00000309534 KRTAP13-4Q3LI77 160 aa7.29□□□□□ -1.24
CGGBP1-201ENST00000309534 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
CGGBP1-201ENST00000309534 LRP2P98164 4655 aa7.22□□□□□ -1.25
CGGBP1-201ENST00000309534 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
CGGBP1-201ENST00000309534 H3BS24 57 aa7.2□□□□□ -1.26
CGGBP1-201ENST00000309534 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
CGGBP1-201ENST00000309534 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
CGGBP1-201ENST00000309534 HERC1Q15751 4861 aa7.13□□□□□ -1.27
CGGBP1-201ENST00000309534 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
CGGBP1-201ENST00000309534 LPAP08519 4548 aa7.12□□□□□ -1.27
CGGBP1-201ENST00000309534 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
CGGBP1-201ENST00000309534 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
CGGBP1-201ENST00000309534 MT1HP80294 61 aa7.06□□□□□ -1.28
CGGBP1-201ENST00000309534 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
CGGBP1-201ENST00000309534 TNP1P09430 55 aa7□□□□□ -1.29
CGGBP1-201ENST00000309534 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
CGGBP1-201ENST00000309534 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
CGGBP1-201ENST00000309534 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
CGGBP1-201ENST00000309534 HMCN2Q8NDA2 5059 aa6.88□□□□□ -1.31
CGGBP1-201ENST00000309534 MT2AP02795 61 aa6.85□□□□□ -1.31
CGGBP1-201ENST00000309534 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
CGGBP1-201ENST00000309534 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
CGGBP1-201ENST00000309534 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
CGGBP1-201ENST00000309534 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
CGGBP1-201ENST00000309534 MT1FP04733 61 aa6.76□□□□□ -1.33
CGGBP1-201ENST00000309534 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
CGGBP1-201ENST00000309534 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
CGGBP1-201ENST00000309534 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
CGGBP1-201ENST00000309534 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
CGGBP1-201ENST00000309534 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
CGGBP1-201ENST00000309534 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
CGGBP1-201ENST00000309534 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
CGGBP1-201ENST00000309534 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
CGGBP1-201ENST00000309534 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
CGGBP1-201ENST00000309534 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
CGGBP1-201ENST00000309534 MT1BP07438 61 aa6.39□□□□□ -1.39
CGGBP1-201ENST00000309534 MUC2Q02817 5179 aa6.39□□□□□ -1.39
CGGBP1-201ENST00000309534 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
CGGBP1-201ENST00000309534 A0A0A0MQY5 61 aa6.27□□□□□ -1.41
CGGBP1-201ENST00000309534 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
CGGBP1-201ENST00000309534 MT1XP80297 61 aa6.25□□□□□ -1.41
CGGBP1-201ENST00000309534 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
CGGBP1-201ENST00000309534 LCE2BO14633 110 aa6.2□□□□□ -1.42
CGGBP1-201ENST00000309534 KRTAP12-3P60328 96 aa6.15□□□□□ -1.43
CGGBP1-201ENST00000309534 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
CGGBP1-201ENST00000309534 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
CGGBP1-201ENST00000309534 NDUFAF8A1L188 74 aa6.08□□□□□ -1.44
CGGBP1-201ENST00000309534 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
CGGBP1-201ENST00000309534 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
CGGBP1-201ENST00000309534 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
CGGBP1-201ENST00000309534 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
CGGBP1-201ENST00000309534 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
CGGBP1-201ENST00000309534 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
CGGBP1-201ENST00000309534 KRTAP4-8Q9BYQ9 185 aa5.71□□□□□ -1.5
CGGBP1-201ENST00000309534 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
CGGBP1-201ENST00000309534 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CGGBP1-201ENST00000309534 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
CGGBP1-201ENST00000309534 USH2AO75445 5202 aa5.62□□□□□ -1.51
CGGBP1-201ENST00000309534 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
CGGBP1-201ENST00000309534 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
CGGBP1-201ENST00000309534 MT1EP04732 61 aa5.53□□□□□ -1.52
CGGBP1-201ENST00000309534 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
CGGBP1-201ENST00000309534 MT1LQ93083 61 aa5.47□□□□□ -1.53
CGGBP1-201ENST00000309534 MT1GP13640 62 aa5.44□□□□□ -1.54
CGGBP1-201ENST00000309534 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
CGGBP1-201ENST00000309534 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
CGGBP1-201ENST00000309534 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
CGGBP1-201ENST00000309534 SPRR2EP22531 72 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms