RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TNXBP22105 4242 aa8.64□□□□□ -1.03
SSH3-201ENST00000308127 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
SSH3-201ENST00000308127 LPAP08519 4548 aa8.6□□□□□ -1.03
SSH3-201ENST00000308127 KRTAP10-8P60410 259 aa8.59□□□□□ -1.03
SSH3-201ENST00000308127 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
SSH3-201ENST00000308127 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
SSH3-201ENST00000308127 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
SSH3-201ENST00000308127 K7ERS5 55 aa8.51□□□□□ -1.05
SSH3-201ENST00000308127 H3BS24 57 aa8.49□□□□□ -1.05
SSH3-201ENST00000308127 P0C880 135 aa8.46□□□□□ -1.05
SSH3-201ENST00000308127 LRP2P98164 4655 aa8.46□□□□□ -1.05
SSH3-201ENST00000308127 KIAA1109Q2LD37 5005 aa8.45□□□□□ -1.06
SSH3-201ENST00000308127 RYR3Q15413 4870 aa8.44□□□□□ -1.06
SSH3-201ENST00000308127 XP32Q5T750 250 aa8.43□□□□□ -1.06
SSH3-201ENST00000308127 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
SSH3-201ENST00000308127 Q5VSD8 79 aa8.42□□□□□ -1.06
SSH3-201ENST00000308127 S4R3F8 94 aa8.42□□□□□ -1.06
SSH3-201ENST00000308127 RPL37P61927 97 aaKnown RBP8.41□□□□□ -1.06
SSH3-201ENST00000308127 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
SSH3-201ENST00000308127 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
SSH3-201ENST00000308127 ROMO1P60602 79 aa8.4□□□□□ -1.06
SSH3-201ENST00000308127 RYR1P21817 5038 aa8.37□□□□□ -1.07
SSH3-201ENST00000308127 KRTAP21-3Q3LHN1 58 aa8.34□□□□□ -1.07
SSH3-201ENST00000308127 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
SSH3-201ENST00000308127 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
SSH3-201ENST00000308127 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
SSH3-201ENST00000308127 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
SSH3-201ENST00000308127 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
SSH3-201ENST00000308127 MT1HL1P0DM35 61 aa8.16□□□□□ -1.1
SSH3-201ENST00000308127 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
SSH3-201ENST00000308127 M0QZ58 72 aa7.97□□□□□ -1.13
SSH3-201ENST00000308127 NDUFAF8A1L188 74 aa7.93□□□□□ -1.14
SSH3-201ENST00000308127 KRTAP4-5Q9BYR2 181 aa7.93□□□□□ -1.14
SSH3-201ENST00000308127 MUC2Q02817 5179 aa7.93□□□□□ -1.14
SSH3-201ENST00000308127 LORP23490 312 aaPredicted RBP7.91□□□□□ -1.14
SSH3-201ENST00000308127 R4GN34 69 aa7.89□□□□□ -1.15
SSH3-201ENST00000308127 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
SSH3-201ENST00000308127 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
SSH3-201ENST00000308127 KRTAP4-1Q9BYQ7 146 aa7.78□□□□□ -1.16
SSH3-201ENST00000308127 HERC2O95714 4834 aa7.71□□□□□ -1.18
SSH3-201ENST00000308127 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
SSH3-201ENST00000308127 J3QL48 77 aa7.56□□□□□ -1.2
SSH3-201ENST00000308127 CAMK2N1Q7Z7J9 78 aa7.55□□□□□ -1.2
SSH3-201ENST00000308127 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
SSH3-201ENST00000308127 PCLOQ9Y6V0 5065 aa7.52□□□□□ -1.21
SSH3-201ENST00000308127 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
SSH3-201ENST00000308127 HERC1Q15751 4861 aa7.51□□□□□ -1.21
SSH3-201ENST00000308127 KRTAP19-2Q3LHN2 52 aa7.48□□□□□ -1.21
SSH3-201ENST00000308127 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
SSH3-201ENST00000308127 BIRC6Q9NR09 4857 aa7.33□□□□□ -1.24
SSH3-201ENST00000308127 RNF213Q63HN8 5207 aa7.29□□□□□ -1.24
SSH3-201ENST00000308127 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
SSH3-201ENST00000308127 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
SSH3-201ENST00000308127 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
SSH3-201ENST00000308127 TNP1P09430 55 aa7.15□□□□□ -1.26
SSH3-201ENST00000308127 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
SSH3-201ENST00000308127 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
SSH3-201ENST00000308127 M0R2T5 61 aa7.05□□□□□ -1.28
SSH3-201ENST00000308127 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
SSH3-201ENST00000308127 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.29
SSH3-201ENST00000308127 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
SSH3-201ENST00000308127 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
SSH3-201ENST00000308127 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
SSH3-201ENST00000308127 MT1FP04733 61 aa6.83□□□□□ -1.32
SSH3-201ENST00000308127 MT1HP80294 61 aa6.83□□□□□ -1.32
SSH3-201ENST00000308127 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
SSH3-201ENST00000308127 MT2AP02795 61 aa6.77□□□□□ -1.33
SSH3-201ENST00000308127 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SSH3-201ENST00000308127 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
SSH3-201ENST00000308127 USH2AO75445 5202 aa6.62□□□□□ -1.35
SSH3-201ENST00000308127 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
SSH3-201ENST00000308127 KMT2DO14686 5537 aa6.58□□□□□ -1.36
SSH3-201ENST00000308127 MT1BP07438 61 aa6.57□□□□□ -1.36
SSH3-201ENST00000308127 MT1XP80297 61 aa6.57□□□□□ -1.36
SSH3-201ENST00000308127 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
SSH3-201ENST00000308127 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
SSH3-201ENST00000308127 KRTAP19-8Q3LI54 63 aa6.5□□□□□ -1.37
SSH3-201ENST00000308127 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
SSH3-201ENST00000308127 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
SSH3-201ENST00000308127 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
SSH3-201ENST00000308127 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
SSH3-201ENST00000308127 LCE2BO14633 110 aa6.19□□□□□ -1.42
SSH3-201ENST00000308127 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
SSH3-201ENST00000308127 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
SSH3-201ENST00000308127 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
SSH3-201ENST00000308127 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
SSH3-201ENST00000308127 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
SSH3-201ENST00000308127 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
SSH3-201ENST00000308127 INE1O15225 51 aa6.02□□□□□ -1.45
SSH3-201ENST00000308127 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
SSH3-201ENST00000308127 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
SSH3-201ENST00000308127 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
SSH3-201ENST00000308127 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
SSH3-201ENST00000308127 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
SSH3-201ENST00000308127 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
SSH3-201ENST00000308127 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
SSH3-201ENST00000308127 MT1LQ93083 61 aa5.67□□□□□ -1.5
SSH3-201ENST00000308127 MT1EP04732 61 aa5.64□□□□□ -1.51
SSH3-201ENST00000308127 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
SSH3-201ENST00000308127 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms