RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 DYNC1H1Q14204 4646 aaKnown RBP6.04□□□□□ -1.44
FOXP4-201ENST00000307972 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
FOXP4-201ENST00000307972 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
FOXP4-201ENST00000307972 KRTAP10-4P60372 401 aaPredicted RBP6.03□□□□□ -1.44
FOXP4-201ENST00000307972 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
FOXP4-201ENST00000307972 A0A0A0MQY5 61 aa6□□□□□ -1.45
FOXP4-201ENST00000307972 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
FOXP4-201ENST00000307972 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
FOXP4-201ENST00000307972 P0C880 135 aa5.97□□□□□ -1.45
FOXP4-201ENST00000307972 C10orf95Q9H7T3 257 aa5.97□□□□□ -1.45
FOXP4-201ENST00000307972 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
FOXP4-201ENST00000307972 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
FOXP4-201ENST00000307972 XP32Q5T750 250 aa5.94□□□□□ -1.46
FOXP4-201ENST00000307972 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
FOXP4-201ENST00000307972 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.46
FOXP4-201ENST00000307972 Q5VSD8 79 aa5.9□□□□□ -1.46
FOXP4-201ENST00000307972 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
FOXP4-201ENST00000307972 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
FOXP4-201ENST00000307972 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
FOXP4-201ENST00000307972 MYCBP2O75592 4640 aa5.84□□□□□ -1.48
FOXP4-201ENST00000307972 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
FOXP4-201ENST00000307972 BIRC6Q9NR09 4857 aa5.81□□□□□ -1.48
FOXP4-201ENST00000307972 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
FOXP4-201ENST00000307972 HSPG2P98160 4391 aa5.79□□□□□ -1.48
FOXP4-201ENST00000307972 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
FOXP4-201ENST00000307972 M0QZ58 72 aa5.77□□□□□ -1.49
FOXP4-201ENST00000307972 KIAA1109Q2LD37 5005 aa5.77□□□□□ -1.49
FOXP4-201ENST00000307972 R4GN34 69 aa5.71□□□□□ -1.5
FOXP4-201ENST00000307972 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
FOXP4-201ENST00000307972 TNXBP22105 4242 aa5.69□□□□□ -1.5
FOXP4-201ENST00000307972 RYR1P21817 5038 aa5.66□□□□□ -1.5
FOXP4-201ENST00000307972 HERC2O95714 4834 aa5.64□□□□□ -1.51
FOXP4-201ENST00000307972 KRTAP17-1Q9BYP8 105 aa5.64□□□□□ -1.51
FOXP4-201ENST00000307972 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
FOXP4-201ENST00000307972 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
FOXP4-201ENST00000307972 ABCA13Q86UQ4 5058 aa5.61□□□□□ -1.51
FOXP4-201ENST00000307972 LRP2P98164 4655 aa5.59□□□□□ -1.52
FOXP4-201ENST00000307972 LPAP08519 4548 aa5.56□□□□□ -1.52
FOXP4-201ENST00000307972 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
FOXP4-201ENST00000307972 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
FOXP4-201ENST00000307972 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
FOXP4-201ENST00000307972 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
FOXP4-201ENST00000307972 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
FOXP4-201ENST00000307972 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
FOXP4-201ENST00000307972 HERC1Q15751 4861 aa5.39□□□□□ -1.55
FOXP4-201ENST00000307972 J3QL48 77 aa5.38□□□□□ -1.55
FOXP4-201ENST00000307972 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
FOXP4-201ENST00000307972 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
FOXP4-201ENST00000307972 TNP1P09430 55 aa5.23□□□□□ -1.57
FOXP4-201ENST00000307972 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
FOXP4-201ENST00000307972 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
FOXP4-201ENST00000307972 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
FOXP4-201ENST00000307972 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
FOXP4-201ENST00000307972 MUC2Q02817 5179 aa5.06□□□□□ -1.6
FOXP4-201ENST00000307972 M0R2T5 61 aa5.02□□□□□ -1.61
FOXP4-201ENST00000307972 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
FOXP4-201ENST00000307972 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
FOXP4-201ENST00000307972 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
FOXP4-201ENST00000307972 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
FOXP4-201ENST00000307972 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
FOXP4-201ENST00000307972 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
FOXP4-201ENST00000307972 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
FOXP4-201ENST00000307972 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
FOXP4-201ENST00000307972 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
FOXP4-201ENST00000307972 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
FOXP4-201ENST00000307972 MT1HP80294 61 aa4.71□□□□□ -1.65
FOXP4-201ENST00000307972 MT1FP04733 61 aa4.71□□□□□ -1.66
FOXP4-201ENST00000307972 MT2AP02795 61 aa4.7□□□□□ -1.66
FOXP4-201ENST00000307972 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
FOXP4-201ENST00000307972 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
FOXP4-201ENST00000307972 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
FOXP4-201ENST00000307972 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
FOXP4-201ENST00000307972 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
FOXP4-201ENST00000307972 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
FOXP4-201ENST00000307972 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
FOXP4-201ENST00000307972 INE1O15225 51 aa4.57□□□□□ -1.68
FOXP4-201ENST00000307972 MT1XP80297 61 aa4.57□□□□□ -1.68
FOXP4-201ENST00000307972 MT1BP07438 61 aa4.55□□□□□ -1.68
FOXP4-201ENST00000307972 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
FOXP4-201ENST00000307972 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
FOXP4-201ENST00000307972 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
FOXP4-201ENST00000307972 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
FOXP4-201ENST00000307972 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
FOXP4-201ENST00000307972 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
FOXP4-201ENST00000307972 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
FOXP4-201ENST00000307972 KMT2DO14686 5537 aa4.22□□□□□ -1.73
FOXP4-201ENST00000307972 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
FOXP4-201ENST00000307972 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
FOXP4-201ENST00000307972 LCE2BO14633 110 aa4.21□□□□□ -1.73
FOXP4-201ENST00000307972 USH2AO75445 5202 aa4.19□□□□□ -1.74
FOXP4-201ENST00000307972 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
FOXP4-201ENST00000307972 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
FOXP4-201ENST00000307972 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
FOXP4-201ENST00000307972 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
FOXP4-201ENST00000307972 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
FOXP4-201ENST00000307972 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
FOXP4-201ENST00000307972 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
FOXP4-201ENST00000307972 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
FOXP4-201ENST00000307972 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
FOXP4-201ENST00000307972 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms