RNA–Protein interactions for RNA: ENST00000305368.8

EPB41L4A-202, Transcript of erythrocyte membrane protein band 4.1 like 4A, humanhuman

TSL 1 (best)

Gene EPB41L4A, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4A-202ENST00000305368 PKHD1L1Q86WI1 4243 aa9.18□□□□□ -0.94
EPB41L4A-202ENST00000305368 FAT1Q14517 4588 aa9.18□□□□□ -0.94
EPB41L4A-202ENST00000305368 APOBP04114 4563 aaKnown RBP9.16□□□□□ -0.94
EPB41L4A-202ENST00000305368 P0C880 135 aa9.15□□□□□ -0.94
EPB41L4A-202ENST00000305368 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
EPB41L4A-202ENST00000305368 RPL37P61927 97 aaKnown RBP9.1□□□□□ -0.95
EPB41L4A-202ENST00000305368 EPPK1P58107 5090 aaKnown RBP9.08□□□□□ -0.96
EPB41L4A-202ENST00000305368 KRTAP13-4Q3LI77 160 aa9.08□□□□□ -0.96
EPB41L4A-202ENST00000305368 KRTAP10-4P60372 401 aaPredicted RBP9.08□□□□□ -0.96
EPB41L4A-202ENST00000305368 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
EPB41L4A-202ENST00000305368 A0A0D9SG42 100 aa9.02□□□□□ -0.97
EPB41L4A-202ENST00000305368 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
EPB41L4A-202ENST00000305368 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
EPB41L4A-202ENST00000305368 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
EPB41L4A-202ENST00000305368 FAT3Q8TDW7 4589 aa8.86□□□□□ -0.99
EPB41L4A-202ENST00000305368 S4R3F8 94 aa8.86□□□□□ -0.99
EPB41L4A-202ENST00000305368 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
EPB41L4A-202ENST00000305368 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
EPB41L4A-202ENST00000305368 BIRC6Q9NR09 4857 aa8.83□□□□□ -1
EPB41L4A-202ENST00000305368 HSPG2P98160 4391 aa8.82□□□□□ -1
EPB41L4A-202ENST00000305368 KRTAP15-1Q3LI76 137 aa8.82□□□□□ -1
EPB41L4A-202ENST00000305368 KRTAP12-2P59991 146 aa8.81□□□□□ -1
EPB41L4A-202ENST00000305368 TNXBP22105 4242 aa8.79□□□□□ -1
EPB41L4A-202ENST00000305368 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1
EPB41L4A-202ENST00000305368 Q5VSD8 79 aa8.77□□□□□ -1.01
EPB41L4A-202ENST00000305368 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
EPB41L4A-202ENST00000305368 RYR1P21817 5038 aa8.72□□□□□ -1.01
EPB41L4A-202ENST00000305368 KRTAP12-1P59990 96 aa8.71□□□□□ -1.01
EPB41L4A-202ENST00000305368 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
EPB41L4A-202ENST00000305368 XP32Q5T750 250 aa8.69□□□□□ -1.02
EPB41L4A-202ENST00000305368 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
EPB41L4A-202ENST00000305368 LCE2BO14633 110 aa8.61□□□□□ -1.03
EPB41L4A-202ENST00000305368 HERC2O95714 4834 aa8.61□□□□□ -1.03
EPB41L4A-202ENST00000305368 M0QZ58 72 aa8.53□□□□□ -1.04
EPB41L4A-202ENST00000305368 MT1HL1P0DM35 61 aa8.51□□□□□ -1.05
EPB41L4A-202ENST00000305368 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
EPB41L4A-202ENST00000305368 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
EPB41L4A-202ENST00000305368 LPAP08519 4548 aa8.42□□□□□ -1.06
EPB41L4A-202ENST00000305368 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
EPB41L4A-202ENST00000305368 LRP2P98164 4655 aa8.29□□□□□ -1.08
EPB41L4A-202ENST00000305368 R4GN34 69 aa8.24□□□□□ -1.09
EPB41L4A-202ENST00000305368 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
EPB41L4A-202ENST00000305368 HERC1Q15751 4861 aa8.14□□□□□ -1.11
EPB41L4A-202ENST00000305368 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
EPB41L4A-202ENST00000305368 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
EPB41L4A-202ENST00000305368 J3QL48 77 aa8□□□□□ -1.13
EPB41L4A-202ENST00000305368 PP632Q6XCG6 107 aa7.96□□□□□ -1.13
EPB41L4A-202ENST00000305368 MUC17Q685J3 4493 aa7.95□□□□□ -1.14
EPB41L4A-202ENST00000305368 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
EPB41L4A-202ENST00000305368 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
EPB41L4A-202ENST00000305368 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
EPB41L4A-202ENST00000305368 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
EPB41L4A-202ENST00000305368 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
EPB41L4A-202ENST00000305368 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
EPB41L4A-202ENST00000305368 A0A0A0MQY5 61 aa7.85□□□□□ -1.15
EPB41L4A-202ENST00000305368 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
EPB41L4A-202ENST00000305368 MUC2Q02817 5179 aa7.7□□□□□ -1.18
EPB41L4A-202ENST00000305368 UBR4Q5T4S7 5183 aa7.67□□□□□ -1.18
EPB41L4A-202ENST00000305368 TNP1P09430 55 aa7.63□□□□□ -1.19
EPB41L4A-202ENST00000305368 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
EPB41L4A-202ENST00000305368 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
EPB41L4A-202ENST00000305368 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
EPB41L4A-202ENST00000305368 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
EPB41L4A-202ENST00000305368 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
EPB41L4A-202ENST00000305368 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
EPB41L4A-202ENST00000305368 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
EPB41L4A-202ENST00000305368 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
EPB41L4A-202ENST00000305368 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
EPB41L4A-202ENST00000305368 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
EPB41L4A-202ENST00000305368 M0R2T5 61 aa7.15□□□□□ -1.26
EPB41L4A-202ENST00000305368 MT1HP80294 61 aa7.13□□□□□ -1.27
EPB41L4A-202ENST00000305368 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
EPB41L4A-202ENST00000305368 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.28
EPB41L4A-202ENST00000305368 INE1O15225 51 aa6.98□□□□□ -1.29
EPB41L4A-202ENST00000305368 MT1FP04733 61 aa6.98□□□□□ -1.29
EPB41L4A-202ENST00000305368 MT2AP02795 61 aa6.97□□□□□ -1.29
EPB41L4A-202ENST00000305368 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
EPB41L4A-202ENST00000305368 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
EPB41L4A-202ENST00000305368 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
EPB41L4A-202ENST00000305368 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
EPB41L4A-202ENST00000305368 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
EPB41L4A-202ENST00000305368 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
EPB41L4A-202ENST00000305368 MT1XP80297 61 aa6.81□□□□□ -1.32
EPB41L4A-202ENST00000305368 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
EPB41L4A-202ENST00000305368 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
EPB41L4A-202ENST00000305368 MT1BP07438 61 aa6.76□□□□□ -1.33
EPB41L4A-202ENST00000305368 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
EPB41L4A-202ENST00000305368 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
EPB41L4A-202ENST00000305368 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
EPB41L4A-202ENST00000305368 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
EPB41L4A-202ENST00000305368 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
EPB41L4A-202ENST00000305368 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
EPB41L4A-202ENST00000305368 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
EPB41L4A-202ENST00000305368 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
EPB41L4A-202ENST00000305368 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
EPB41L4A-202ENST00000305368 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
EPB41L4A-202ENST00000305368 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
EPB41L4A-202ENST00000305368 USH2AO75445 5202 aa6.38□□□□□ -1.39
EPB41L4A-202ENST00000305368 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
EPB41L4A-202ENST00000305368 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms