RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 P0C880 135 aa5.72□□□□□ -1.49
RFX2-201ENST00000303657 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
RFX2-201ENST00000303657 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.5
RFX2-201ENST00000303657 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
RFX2-201ENST00000303657 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
RFX2-201ENST00000303657 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
RFX2-201ENST00000303657 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
RFX2-201ENST00000303657 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
RFX2-201ENST00000303657 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.51
RFX2-201ENST00000303657 RYR2Q92736 4967 aa5.64□□□□□ -1.51
RFX2-201ENST00000303657 RYR3Q15413 4870 aa5.62□□□□□ -1.51
RFX2-201ENST00000303657 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
RFX2-201ENST00000303657 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
RFX2-201ENST00000303657 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
RFX2-201ENST00000303657 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
RFX2-201ENST00000303657 RYR1P21817 5038 aa5.56□□□□□ -1.52
RFX2-201ENST00000303657 XP32Q5T750 250 aa5.56□□□□□ -1.52
RFX2-201ENST00000303657 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
RFX2-201ENST00000303657 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
RFX2-201ENST00000303657 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
RFX2-201ENST00000303657 S4R3F8 94 aa5.48□□□□□ -1.53
RFX2-201ENST00000303657 HSPG2P98160 4391 aa5.46□□□□□ -1.54
RFX2-201ENST00000303657 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
RFX2-201ENST00000303657 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
RFX2-201ENST00000303657 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
RFX2-201ENST00000303657 KRTAP12-2P59991 146 aa5.4□□□□□ -1.55
RFX2-201ENST00000303657 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
RFX2-201ENST00000303657 M0R2T5 61 aa5.38□□□□□ -1.55
RFX2-201ENST00000303657 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
RFX2-201ENST00000303657 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
RFX2-201ENST00000303657 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
RFX2-201ENST00000303657 LRP2P98164 4655 aa5.34□□□□□ -1.55
RFX2-201ENST00000303657 M0QZ58 72 aa5.29□□□□□ -1.56
RFX2-201ENST00000303657 TNXBP22105 4242 aa5.28□□□□□ -1.56
RFX2-201ENST00000303657 KRTAP3-2Q9BYR7 98 aa5.28□□□□□ -1.56
RFX2-201ENST00000303657 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
RFX2-201ENST00000303657 LPAP08519 4548 aa5.27□□□□□ -1.57
RFX2-201ENST00000303657 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
RFX2-201ENST00000303657 R4GN34 69 aa5.26□□□□□ -1.57
RFX2-201ENST00000303657 HERC2O95714 4834 aa5.25□□□□□ -1.57
RFX2-201ENST00000303657 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
RFX2-201ENST00000303657 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
RFX2-201ENST00000303657 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
RFX2-201ENST00000303657 MUC2Q02817 5179 aa5.07□□□□□ -1.6
RFX2-201ENST00000303657 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
RFX2-201ENST00000303657 HERC1Q15751 4861 aa5.02□□□□□ -1.61
RFX2-201ENST00000303657 BIRC6Q9NR09 4857 aa5□□□□□ -1.61
RFX2-201ENST00000303657 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
RFX2-201ENST00000303657 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
RFX2-201ENST00000303657 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
RFX2-201ENST00000303657 PCLOQ9Y6V0 5065 aa4.87□□□□□ -1.63
RFX2-201ENST00000303657 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
RFX2-201ENST00000303657 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
RFX2-201ENST00000303657 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
RFX2-201ENST00000303657 TNP1P09430 55 aa4.79□□□□□ -1.64
RFX2-201ENST00000303657 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
RFX2-201ENST00000303657 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
RFX2-201ENST00000303657 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
RFX2-201ENST00000303657 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
RFX2-201ENST00000303657 MT1HP80294 61 aa4.6□□□□□ -1.67
RFX2-201ENST00000303657 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.67
RFX2-201ENST00000303657 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
RFX2-201ENST00000303657 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
RFX2-201ENST00000303657 MT1FP04733 61 aa4.52□□□□□ -1.69
RFX2-201ENST00000303657 MT2AP02795 61 aa4.51□□□□□ -1.69
RFX2-201ENST00000303657 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
RFX2-201ENST00000303657 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
RFX2-201ENST00000303657 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
RFX2-201ENST00000303657 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
RFX2-201ENST00000303657 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
RFX2-201ENST00000303657 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
RFX2-201ENST00000303657 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.72
RFX2-201ENST00000303657 INE1O15225 51 aa4.31□□□□□ -1.72
RFX2-201ENST00000303657 USH2AO75445 5202 aa4.31□□□□□ -1.72
RFX2-201ENST00000303657 MT1BP07438 61 aa4.25□□□□□ -1.73
RFX2-201ENST00000303657 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
RFX2-201ENST00000303657 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
RFX2-201ENST00000303657 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
RFX2-201ENST00000303657 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
RFX2-201ENST00000303657 MT1XP80297 61 aa4.19□□□□□ -1.74
RFX2-201ENST00000303657 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
RFX2-201ENST00000303657 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
RFX2-201ENST00000303657 LCE2BO14633 110 aa4.14□□□□□ -1.75
RFX2-201ENST00000303657 KMT2DO14686 5537 aa4.11□□□□□ -1.75
RFX2-201ENST00000303657 KRTAP8-1Q8IUC2 63 aa4.07□□□□□ -1.76
RFX2-201ENST00000303657 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
RFX2-201ENST00000303657 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
RFX2-201ENST00000303657 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
RFX2-201ENST00000303657 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
RFX2-201ENST00000303657 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
RFX2-201ENST00000303657 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
RFX2-201ENST00000303657 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
RFX2-201ENST00000303657 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
RFX2-201ENST00000303657 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
RFX2-201ENST00000303657 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
RFX2-201ENST00000303657 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
RFX2-201ENST00000303657 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
RFX2-201ENST00000303657 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
RFX2-201ENST00000303657 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
RFX2-201ENST00000303657 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms