RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 VPS13BQ7Z7G8 4022 aa7.28□□□□□ -1.24
KARS-201ENST00000302445 C9orf92A6NGG3 77 aa7.27□□□□□ -1.25
KARS-201ENST00000302445 RYR2Q92736 4967 aa7.23□□□□□ -1.25
KARS-201ENST00000302445 HYDINQ4G0P3 5121 aa7.22□□□□□ -1.25
KARS-201ENST00000302445 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
KARS-201ENST00000302445 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
KARS-201ENST00000302445 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
KARS-201ENST00000302445 FAT2Q9NYQ8 4349 aa7.2□□□□□ -1.26
KARS-201ENST00000302445 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
KARS-201ENST00000302445 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
KARS-201ENST00000302445 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
KARS-201ENST00000302445 EPPK1P58107 5090 aaKnown RBP7.16□□□□□ -1.26
KARS-201ENST00000302445 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
KARS-201ENST00000302445 KRTAP4-12Q9BQ66 201 aa7.1□□□□□ -1.27
KARS-201ENST00000302445 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
KARS-201ENST00000302445 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
KARS-201ENST00000302445 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
KARS-201ENST00000302445 S4R3F8 94 aa7.06□□□□□ -1.28
KARS-201ENST00000302445 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
KARS-201ENST00000302445 A0A0D9SG42 100 aa7.05□□□□□ -1.28
KARS-201ENST00000302445 APOBP04114 4563 aaKnown RBP7.05□□□□□ -1.28
KARS-201ENST00000302445 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
KARS-201ENST00000302445 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
KARS-201ENST00000302445 BIRC6Q9NR09 4857 aa7□□□□□ -1.29
KARS-201ENST00000302445 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
KARS-201ENST00000302445 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
KARS-201ENST00000302445 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
KARS-201ENST00000302445 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
KARS-201ENST00000302445 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
KARS-201ENST00000302445 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
KARS-201ENST00000302445 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
KARS-201ENST00000302445 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
KARS-201ENST00000302445 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
KARS-201ENST00000302445 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
KARS-201ENST00000302445 M0QZ58 72 aa6.91□□□□□ -1.3
KARS-201ENST00000302445 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
KARS-201ENST00000302445 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
KARS-201ENST00000302445 KRTAP10-8P60410 259 aa6.86□□□□□ -1.31
KARS-201ENST00000302445 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
KARS-201ENST00000302445 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.31
KARS-201ENST00000302445 TNXBP22105 4242 aa6.84□□□□□ -1.31
KARS-201ENST00000302445 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
KARS-201ENST00000302445 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
KARS-201ENST00000302445 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
KARS-201ENST00000302445 FAT1Q14517 4588 aa6.79□□□□□ -1.32
KARS-201ENST00000302445 HERC2O95714 4834 aa6.78□□□□□ -1.32
KARS-201ENST00000302445 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
KARS-201ENST00000302445 HSPG2P98160 4391 aa6.77□□□□□ -1.33
KARS-201ENST00000302445 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
KARS-201ENST00000302445 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
KARS-201ENST00000302445 PCLOQ9Y6V0 5065 aa6.7□□□□□ -1.34
KARS-201ENST00000302445 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
KARS-201ENST00000302445 RYR1P21817 5038 aa6.67□□□□□ -1.34
KARS-201ENST00000302445 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
KARS-201ENST00000302445 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
KARS-201ENST00000302445 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
KARS-201ENST00000302445 R4GN34 69 aa6.55□□□□□ -1.36
KARS-201ENST00000302445 Q5VSD8 79 aa6.54□□□□□ -1.36
KARS-201ENST00000302445 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
KARS-201ENST00000302445 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
KARS-201ENST00000302445 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
KARS-201ENST00000302445 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
KARS-201ENST00000302445 HERC1Q15751 4861 aa6.43□□□□□ -1.38
KARS-201ENST00000302445 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
KARS-201ENST00000302445 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
KARS-201ENST00000302445 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
KARS-201ENST00000302445 LPAP08519 4548 aa6.32□□□□□ -1.4
KARS-201ENST00000302445 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
KARS-201ENST00000302445 LRP2P98164 4655 aa6.26□□□□□ -1.41
KARS-201ENST00000302445 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
KARS-201ENST00000302445 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
KARS-201ENST00000302445 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
KARS-201ENST00000302445 TNP1P09430 55 aa6.13□□□□□ -1.43
KARS-201ENST00000302445 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
KARS-201ENST00000302445 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
KARS-201ENST00000302445 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
KARS-201ENST00000302445 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
KARS-201ENST00000302445 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
KARS-201ENST00000302445 KRTAP4-1Q9BYQ7 146 aa6.02□□□□□ -1.45
KARS-201ENST00000302445 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
KARS-201ENST00000302445 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
KARS-201ENST00000302445 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
KARS-201ENST00000302445 KRTAP4-2Q9BYR5 136 aa5.85□□□□□ -1.47
KARS-201ENST00000302445 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
KARS-201ENST00000302445 INE1O15225 51 aa5.79□□□□□ -1.48
KARS-201ENST00000302445 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
KARS-201ENST00000302445 MUC2Q02817 5179 aa5.76□□□□□ -1.49
KARS-201ENST00000302445 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
KARS-201ENST00000302445 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.51
KARS-201ENST00000302445 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
KARS-201ENST00000302445 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
KARS-201ENST00000302445 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
KARS-201ENST00000302445 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
KARS-201ENST00000302445 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
KARS-201ENST00000302445 MT2AP02795 61 aa5.36□□□□□ -1.55
KARS-201ENST00000302445 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
KARS-201ENST00000302445 MT1FP04733 61 aa5.35□□□□□ -1.55
KARS-201ENST00000302445 M0R2T5 61 aa5.35□□□□□ -1.55
KARS-201ENST00000302445 MT1HP80294 61 aa5.35□□□□□ -1.55
KARS-201ENST00000302445 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms