RNA–Protein interactions for RNA: ENST00000299667.8

ZNF3-202, Transcript of zinc finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF3, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-202ENST00000299667 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
ZNF3-202ENST00000299667 RYR2Q92736 4967 aa4.48□□□□□ -1.69
ZNF3-202ENST00000299667 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.7
ZNF3-202ENST00000299667 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.7
ZNF3-202ENST00000299667 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
ZNF3-202ENST00000299667 K7ERS5 55 aa4.45□□□□□ -1.7
ZNF3-202ENST00000299667 APOBP04114 4563 aaKnown RBP4.44□□□□□ -1.7
ZNF3-202ENST00000299667 RYR3Q15413 4870 aa4.43□□□□□ -1.7
ZNF3-202ENST00000299667 A0A0D9SG42 100 aa4.42□□□□□ -1.7
ZNF3-202ENST00000299667 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
ZNF3-202ENST00000299667 ROMO1P60602 79 aa4.41□□□□□ -1.7
ZNF3-202ENST00000299667 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
ZNF3-202ENST00000299667 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
ZNF3-202ENST00000299667 A0A1B0GVY2 172 aa4.39□□□□□ -1.71
ZNF3-202ENST00000299667 HSPG2P98160 4391 aa4.38□□□□□ -1.71
ZNF3-202ENST00000299667 RPL37P61927 97 aaKnown RBP4.38□□□□□ -1.71
ZNF3-202ENST00000299667 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
ZNF3-202ENST00000299667 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
ZNF3-202ENST00000299667 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
ZNF3-202ENST00000299667 P0C880 135 aa4.34□□□□□ -1.72
ZNF3-202ENST00000299667 S4R3F8 94 aa4.33□□□□□ -1.72
ZNF3-202ENST00000299667 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
ZNF3-202ENST00000299667 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
ZNF3-202ENST00000299667 XP32Q5T750 250 aa4.31□□□□□ -1.72
ZNF3-202ENST00000299667 TNXBP22105 4242 aa4.3□□□□□ -1.72
ZNF3-202ENST00000299667 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
ZNF3-202ENST00000299667 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
ZNF3-202ENST00000299667 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
ZNF3-202ENST00000299667 Q5VSD8 79 aa4.25□□□□□ -1.73
ZNF3-202ENST00000299667 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
ZNF3-202ENST00000299667 LPAP08519 4548 aa4.22□□□□□ -1.73
ZNF3-202ENST00000299667 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
ZNF3-202ENST00000299667 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
ZNF3-202ENST00000299667 LRP2P98164 4655 aa4.18□□□□□ -1.74
ZNF3-202ENST00000299667 RYR1P21817 5038 aa4.17□□□□□ -1.74
ZNF3-202ENST00000299667 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
ZNF3-202ENST00000299667 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
ZNF3-202ENST00000299667 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
ZNF3-202ENST00000299667 HERC2O95714 4834 aa4.13□□□□□ -1.75
ZNF3-202ENST00000299667 KIAA1109Q2LD37 5005 aa4.13□□□□□ -1.75
ZNF3-202ENST00000299667 M0QZ58 72 aa4.12□□□□□ -1.75
ZNF3-202ENST00000299667 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
ZNF3-202ENST00000299667 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
ZNF3-202ENST00000299667 R4GN34 69 aa4.05□□□□□ -1.76
ZNF3-202ENST00000299667 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
ZNF3-202ENST00000299667 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
ZNF3-202ENST00000299667 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
ZNF3-202ENST00000299667 MUC17Q685J3 4493 aa3.94□□□□□ -1.78
ZNF3-202ENST00000299667 PCLOQ9Y6V0 5065 aa3.94□□□□□ -1.78
ZNF3-202ENST00000299667 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
ZNF3-202ENST00000299667 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
ZNF3-202ENST00000299667 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
ZNF3-202ENST00000299667 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
ZNF3-202ENST00000299667 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
ZNF3-202ENST00000299667 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
ZNF3-202ENST00000299667 MUC2Q02817 5179 aa3.81□□□□□ -1.8
ZNF3-202ENST00000299667 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
ZNF3-202ENST00000299667 KRTAP19-1Q8IUB9 90 aa3.77□□□□□ -1.81
ZNF3-202ENST00000299667 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
ZNF3-202ENST00000299667 HERC1Q15751 4861 aa3.76□□□□□ -1.81
ZNF3-202ENST00000299667 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
ZNF3-202ENST00000299667 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
ZNF3-202ENST00000299667 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
ZNF3-202ENST00000299667 TNP1P09430 55 aa3.71□□□□□ -1.82
ZNF3-202ENST00000299667 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
ZNF3-202ENST00000299667 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
ZNF3-202ENST00000299667 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
ZNF3-202ENST00000299667 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
ZNF3-202ENST00000299667 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
ZNF3-202ENST00000299667 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
ZNF3-202ENST00000299667 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
ZNF3-202ENST00000299667 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
ZNF3-202ENST00000299667 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
ZNF3-202ENST00000299667 M0R2T5 61 aa3.54□□□□□ -1.84
ZNF3-202ENST00000299667 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
ZNF3-202ENST00000299667 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
ZNF3-202ENST00000299667 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
ZNF3-202ENST00000299667 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
ZNF3-202ENST00000299667 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
ZNF3-202ENST00000299667 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
ZNF3-202ENST00000299667 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
ZNF3-202ENST00000299667 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
ZNF3-202ENST00000299667 MT1FP04733 61 aa3.46□□□□□ -1.86
ZNF3-202ENST00000299667 MT1HP80294 61 aa3.46□□□□□ -1.86
ZNF3-202ENST00000299667 MT2AP02795 61 aa3.44□□□□□ -1.86
ZNF3-202ENST00000299667 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
ZNF3-202ENST00000299667 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
ZNF3-202ENST00000299667 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
ZNF3-202ENST00000299667 MT1XP80297 61 aa3.36□□□□□ -1.87
ZNF3-202ENST00000299667 MT1BP07438 61 aa3.35□□□□□ -1.87
ZNF3-202ENST00000299667 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
ZNF3-202ENST00000299667 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
ZNF3-202ENST00000299667 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
ZNF3-202ENST00000299667 KRTAP12-3P60328 96 aa3.34□□□□□ -1.88
ZNF3-202ENST00000299667 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
ZNF3-202ENST00000299667 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
ZNF3-202ENST00000299667 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
ZNF3-202ENST00000299667 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
ZNF3-202ENST00000299667 INE1O15225 51 aa3.22□□□□□ -1.89
ZNF3-202ENST00000299667 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms