RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
CDH8-201ENST00000299345 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.29
CDH8-201ENST00000299345 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
CDH8-201ENST00000299345 A0A0D9SG42 100 aa6.93□□□□□ -1.3
CDH8-201ENST00000299345 HSPG2P98160 4391 aa6.93□□□□□ -1.3
CDH8-201ENST00000299345 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
CDH8-201ENST00000299345 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
CDH8-201ENST00000299345 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
CDH8-201ENST00000299345 RYR1P21817 5038 aa6.92□□□□□ -1.3
CDH8-201ENST00000299345 RYR3Q15413 4870 aa6.89□□□□□ -1.31
CDH8-201ENST00000299345 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
CDH8-201ENST00000299345 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
CDH8-201ENST00000299345 TNXBP22105 4242 aa6.88□□□□□ -1.31
CDH8-201ENST00000299345 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
CDH8-201ENST00000299345 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
CDH8-201ENST00000299345 J3QL48 77 aa6.82□□□□□ -1.32
CDH8-201ENST00000299345 P0C880 135 aa6.8□□□□□ -1.32
CDH8-201ENST00000299345 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
CDH8-201ENST00000299345 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
CDH8-201ENST00000299345 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
CDH8-201ENST00000299345 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
CDH8-201ENST00000299345 ROMO1P60602 79 aa6.75□□□□□ -1.33
CDH8-201ENST00000299345 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
CDH8-201ENST00000299345 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
CDH8-201ENST00000299345 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
CDH8-201ENST00000299345 LRP2P98164 4655 aa6.65□□□□□ -1.34
CDH8-201ENST00000299345 M0QZ58 72 aa6.64□□□□□ -1.35
CDH8-201ENST00000299345 EPPK1P58107 5090 aaKnown RBP6.64□□□□□ -1.35
CDH8-201ENST00000299345 R4GN34 69 aa6.6□□□□□ -1.35
CDH8-201ENST00000299345 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
CDH8-201ENST00000299345 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
CDH8-201ENST00000299345 LPAP08519 4548 aa6.53□□□□□ -1.36
CDH8-201ENST00000299345 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
CDH8-201ENST00000299345 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
CDH8-201ENST00000299345 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
CDH8-201ENST00000299345 HERC2O95714 4834 aa6.39□□□□□ -1.39
CDH8-201ENST00000299345 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
CDH8-201ENST00000299345 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
CDH8-201ENST00000299345 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
CDH8-201ENST00000299345 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
CDH8-201ENST00000299345 BIRC6Q9NR09 4857 aa6.19□□□□□ -1.42
CDH8-201ENST00000299345 M0R2T5 61 aa6.16□□□□□ -1.42
CDH8-201ENST00000299345 H3BS24 57 aa6.15□□□□□ -1.42
CDH8-201ENST00000299345 MUC2Q02817 5179 aa6.1□□□□□ -1.43
CDH8-201ENST00000299345 HERC1Q15751 4861 aa6.02□□□□□ -1.45
CDH8-201ENST00000299345 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
CDH8-201ENST00000299345 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
CDH8-201ENST00000299345 NDUFAF8A1L188 74 aa6□□□□□ -1.45
CDH8-201ENST00000299345 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
CDH8-201ENST00000299345 PLAC4Q8WY50 150 aa6□□□□□ -1.45
CDH8-201ENST00000299345 TNP1P09430 55 aa5.99□□□□□ -1.45
CDH8-201ENST00000299345 PCLOQ9Y6V0 5065 aa5.96□□□□□ -1.45
CDH8-201ENST00000299345 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
CDH8-201ENST00000299345 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
CDH8-201ENST00000299345 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
CDH8-201ENST00000299345 MT1HP80294 61 aa5.85□□□□□ -1.47
CDH8-201ENST00000299345 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.47
CDH8-201ENST00000299345 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
CDH8-201ENST00000299345 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
CDH8-201ENST00000299345 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
CDH8-201ENST00000299345 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
CDH8-201ENST00000299345 MT2AP02795 61 aa5.75□□□□□ -1.49
CDH8-201ENST00000299345 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
CDH8-201ENST00000299345 MT1FP04733 61 aa5.74□□□□□ -1.49
CDH8-201ENST00000299345 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
CDH8-201ENST00000299345 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
CDH8-201ENST00000299345 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
CDH8-201ENST00000299345 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
CDH8-201ENST00000299345 MT1BP07438 61 aa5.49□□□□□ -1.53
CDH8-201ENST00000299345 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
CDH8-201ENST00000299345 MT1XP80297 61 aa5.44□□□□□ -1.54
CDH8-201ENST00000299345 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
CDH8-201ENST00000299345 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
CDH8-201ENST00000299345 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
CDH8-201ENST00000299345 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
CDH8-201ENST00000299345 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
CDH8-201ENST00000299345 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
CDH8-201ENST00000299345 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
CDH8-201ENST00000299345 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
CDH8-201ENST00000299345 LCE2BO14633 110 aa5.23□□□□□ -1.57
CDH8-201ENST00000299345 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.58
CDH8-201ENST00000299345 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
CDH8-201ENST00000299345 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
CDH8-201ENST00000299345 USH2AO75445 5202 aa5.08□□□□□ -1.6
CDH8-201ENST00000299345 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
CDH8-201ENST00000299345 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
CDH8-201ENST00000299345 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
CDH8-201ENST00000299345 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
CDH8-201ENST00000299345 KMT2DO14686 5537 aa4.93□□□□□ -1.62
CDH8-201ENST00000299345 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
CDH8-201ENST00000299345 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
CDH8-201ENST00000299345 INE1O15225 51 aa4.81□□□□□ -1.64
CDH8-201ENST00000299345 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
CDH8-201ENST00000299345 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
CDH8-201ENST00000299345 MT1EP04732 61 aa4.73□□□□□ -1.65
CDH8-201ENST00000299345 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
CDH8-201ENST00000299345 MT1LQ93083 61 aa4.72□□□□□ -1.65
CDH8-201ENST00000299345 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
CDH8-201ENST00000299345 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
CDH8-201ENST00000299345 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms