RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 HSPG2P98160 4391 aa7.04□□□□□ -1.28
BCCIP-202ENST00000299130 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
BCCIP-202ENST00000299130 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
BCCIP-202ENST00000299130 XP32Q5T750 250 aa7.02□□□□□ -1.29
BCCIP-202ENST00000299130 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
BCCIP-202ENST00000299130 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
BCCIP-202ENST00000299130 RYR3Q15413 4870 aa6.95□□□□□ -1.3
BCCIP-202ENST00000299130 RYR1P21817 5038 aa6.95□□□□□ -1.3
BCCIP-202ENST00000299130 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
BCCIP-202ENST00000299130 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
BCCIP-202ENST00000299130 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
BCCIP-202ENST00000299130 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
BCCIP-202ENST00000299130 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
BCCIP-202ENST00000299130 S4R3F8 94 aa6.89□□□□□ -1.31
BCCIP-202ENST00000299130 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
BCCIP-202ENST00000299130 ROMO1P60602 79 aa6.88□□□□□ -1.31
BCCIP-202ENST00000299130 P0C880 135 aa6.83□□□□□ -1.32
BCCIP-202ENST00000299130 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
BCCIP-202ENST00000299130 A0A0D9SG42 100 aa6.82□□□□□ -1.32
BCCIP-202ENST00000299130 LPAP08519 4548 aa6.81□□□□□ -1.32
BCCIP-202ENST00000299130 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
BCCIP-202ENST00000299130 K7ERS5 55 aa6.79□□□□□ -1.32
BCCIP-202ENST00000299130 LRP2P98164 4655 aa6.75□□□□□ -1.33
BCCIP-202ENST00000299130 EPPK1P58107 5090 aaKnown RBP6.71□□□□□ -1.34
BCCIP-202ENST00000299130 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
BCCIP-202ENST00000299130 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
BCCIP-202ENST00000299130 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
BCCIP-202ENST00000299130 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
BCCIP-202ENST00000299130 A0A0A0MQY5 61 aa6.65□□□□□ -1.35
BCCIP-202ENST00000299130 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
BCCIP-202ENST00000299130 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
BCCIP-202ENST00000299130 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
BCCIP-202ENST00000299130 M0QZ58 72 aa6.5□□□□□ -1.37
BCCIP-202ENST00000299130 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
BCCIP-202ENST00000299130 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
BCCIP-202ENST00000299130 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
BCCIP-202ENST00000299130 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
BCCIP-202ENST00000299130 R4GN34 69 aa6.38□□□□□ -1.39
BCCIP-202ENST00000299130 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
BCCIP-202ENST00000299130 J3QL48 77 aa6.36□□□□□ -1.39
BCCIP-202ENST00000299130 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
BCCIP-202ENST00000299130 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
BCCIP-202ENST00000299130 HERC2O95714 4834 aa6.29□□□□□ -1.4
BCCIP-202ENST00000299130 MUC2Q02817 5179 aa6.21□□□□□ -1.42
BCCIP-202ENST00000299130 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
BCCIP-202ENST00000299130 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
BCCIP-202ENST00000299130 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
BCCIP-202ENST00000299130 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
BCCIP-202ENST00000299130 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
BCCIP-202ENST00000299130 HERC1Q15751 4861 aa6.01□□□□□ -1.45
BCCIP-202ENST00000299130 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
BCCIP-202ENST00000299130 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.45
BCCIP-202ENST00000299130 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
BCCIP-202ENST00000299130 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.46
BCCIP-202ENST00000299130 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
BCCIP-202ENST00000299130 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
BCCIP-202ENST00000299130 TNP1P09430 55 aa5.81□□□□□ -1.48
BCCIP-202ENST00000299130 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
BCCIP-202ENST00000299130 MT1HP80294 61 aa5.79□□□□□ -1.48
BCCIP-202ENST00000299130 M0R2T5 61 aa5.77□□□□□ -1.49
BCCIP-202ENST00000299130 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
BCCIP-202ENST00000299130 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
BCCIP-202ENST00000299130 MT1FP04733 61 aa5.72□□□□□ -1.49
BCCIP-202ENST00000299130 MT2AP02795 61 aa5.7□□□□□ -1.5
BCCIP-202ENST00000299130 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
BCCIP-202ENST00000299130 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
BCCIP-202ENST00000299130 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
BCCIP-202ENST00000299130 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
BCCIP-202ENST00000299130 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
BCCIP-202ENST00000299130 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
BCCIP-202ENST00000299130 MT1BP07438 61 aa5.52□□□□□ -1.53
BCCIP-202ENST00000299130 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
BCCIP-202ENST00000299130 MT1XP80297 61 aa5.48□□□□□ -1.53
BCCIP-202ENST00000299130 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
BCCIP-202ENST00000299130 KRTAP9-3Q9BYQ3 159 aa5.42□□□□□ -1.54
BCCIP-202ENST00000299130 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
BCCIP-202ENST00000299130 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
BCCIP-202ENST00000299130 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
BCCIP-202ENST00000299130 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
BCCIP-202ENST00000299130 INE1O15225 51 aa5.25□□□□□ -1.57
BCCIP-202ENST00000299130 LCE2BO14633 110 aa5.24□□□□□ -1.57
BCCIP-202ENST00000299130 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
BCCIP-202ENST00000299130 USH2AO75445 5202 aa5.13□□□□□ -1.59
BCCIP-202ENST00000299130 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
BCCIP-202ENST00000299130 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
BCCIP-202ENST00000299130 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
BCCIP-202ENST00000299130 KMT2DO14686 5537 aa5.05□□□□□ -1.6
BCCIP-202ENST00000299130 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
BCCIP-202ENST00000299130 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
BCCIP-202ENST00000299130 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
BCCIP-202ENST00000299130 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
BCCIP-202ENST00000299130 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
BCCIP-202ENST00000299130 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
BCCIP-202ENST00000299130 MT1LQ93083 61 aa4.73□□□□□ -1.65
BCCIP-202ENST00000299130 MT1EP04732 61 aa4.72□□□□□ -1.65
BCCIP-202ENST00000299130 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
BCCIP-202ENST00000299130 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
BCCIP-202ENST00000299130 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
BCCIP-202ENST00000299130 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
BCCIP-202ENST00000299130 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms