RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
PCDH11X-201ENST00000298274 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
PCDH11X-201ENST00000298274 SACSQ9NZJ4 4579 aa5.72□□□□□ -1.49
PCDH11X-201ENST00000298274 A6NN06 94 aa5.71□□□□□ -1.5
PCDH11X-201ENST00000298274 RYR1P21817 5038 aa5.67□□□□□ -1.5
PCDH11X-201ENST00000298274 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
PCDH11X-201ENST00000298274 P0C880 135 aa5.66□□□□□ -1.5
PCDH11X-201ENST00000298274 A8MU10 97 aa5.65□□□□□ -1.5
PCDH11X-201ENST00000298274 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
PCDH11X-201ENST00000298274 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-201ENST00000298274 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
PCDH11X-201ENST00000298274 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
PCDH11X-201ENST00000298274 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
PCDH11X-201ENST00000298274 RYR3Q15413 4870 aa5.52□□□□□ -1.53
PCDH11X-201ENST00000298274 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
PCDH11X-201ENST00000298274 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
PCDH11X-201ENST00000298274 FAT1Q14517 4588 aa5.47□□□□□ -1.53
PCDH11X-201ENST00000298274 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
PCDH11X-201ENST00000298274 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
PCDH11X-201ENST00000298274 MT1HP80294 61 aa5.44□□□□□ -1.54
PCDH11X-201ENST00000298274 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
PCDH11X-201ENST00000298274 HSPG2P98160 4391 aa5.42□□□□□ -1.54
PCDH11X-201ENST00000298274 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
PCDH11X-201ENST00000298274 VPS13BQ7Z7G8 4022 aa5.41□□□□□ -1.54
PCDH11X-201ENST00000298274 CSMD3Q7Z407 3707 aa5.4□□□□□ -1.54
PCDH11X-201ENST00000298274 HERC1Q15751 4861 aa5.39□□□□□ -1.55
PCDH11X-201ENST00000298274 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
PCDH11X-201ENST00000298274 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
PCDH11X-201ENST00000298274 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
PCDH11X-201ENST00000298274 PKHD1L1Q86WI1 4243 aa5.38□□□□□ -1.55
PCDH11X-201ENST00000298274 PKD1P98161 4303 aa5.38□□□□□ -1.55
PCDH11X-201ENST00000298274 HYDINQ4G0P3 5121 aa5.36□□□□□ -1.55
PCDH11X-201ENST00000298274 HERC2O95714 4834 aa5.35□□□□□ -1.55
PCDH11X-201ENST00000298274 LYSTQ99698 3801 aa5.35□□□□□ -1.55
PCDH11X-201ENST00000298274 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
PCDH11X-201ENST00000298274 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
PCDH11X-201ENST00000298274 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
PCDH11X-201ENST00000298274 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
PCDH11X-201ENST00000298274 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
PCDH11X-201ENST00000298274 MT2AP02795 61 aa5.25□□□□□ -1.57
PCDH11X-201ENST00000298274 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
PCDH11X-201ENST00000298274 MYCBP2O75592 4640 aa5.22□□□□□ -1.57
PCDH11X-201ENST00000298274 KMT2CQ8NEZ4 4911 aaKnown RBP5.22□□□□□ -1.57
PCDH11X-201ENST00000298274 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
PCDH11X-201ENST00000298274 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
PCDH11X-201ENST00000298274 MT1FP04733 61 aa5.11□□□□□ -1.59
PCDH11X-201ENST00000298274 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
PCDH11X-201ENST00000298274 PCLOQ9Y6V0 5065 aa5.08□□□□□ -1.6
PCDH11X-201ENST00000298274 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
PCDH11X-201ENST00000298274 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
PCDH11X-201ENST00000298274 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-201ENST00000298274 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-201ENST00000298274 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-201ENST00000298274 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
PCDH11X-201ENST00000298274 TNXBP22105 4242 aa5.05□□□□□ -1.6
PCDH11X-201ENST00000298274 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
PCDH11X-201ENST00000298274 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
PCDH11X-201ENST00000298274 ABCA13Q86UQ4 5058 aa4.96□□□□□ -1.62
PCDH11X-201ENST00000298274 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
PCDH11X-201ENST00000298274 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
PCDH11X-201ENST00000298274 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.63
PCDH11X-201ENST00000298274 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
PCDH11X-201ENST00000298274 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
PCDH11X-201ENST00000298274 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-201ENST00000298274 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
PCDH11X-201ENST00000298274 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
PCDH11X-201ENST00000298274 H3BS24 57 aa4.86□□□□□ -1.63
PCDH11X-201ENST00000298274 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
PCDH11X-201ENST00000298274 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
PCDH11X-201ENST00000298274 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
PCDH11X-201ENST00000298274 MT1BP07438 61 aa4.75□□□□□ -1.65
PCDH11X-201ENST00000298274 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.65
PCDH11X-201ENST00000298274 LRP2P98164 4655 aa4.71□□□□□ -1.65
PCDH11X-201ENST00000298274 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
PCDH11X-201ENST00000298274 FLGP20930 4061 aaPredicted RBP4.69□□□□□ -1.66
PCDH11X-201ENST00000298274 KRTAP19-6Q3LI70 58 aa4.66□□□□□ -1.66
PCDH11X-201ENST00000298274 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
PCDH11X-201ENST00000298274 MT1XP80297 61 aa4.64□□□□□ -1.67
PCDH11X-201ENST00000298274 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
PCDH11X-201ENST00000298274 LPAP08519 4548 aa4.6□□□□□ -1.67
PCDH11X-201ENST00000298274 LCE2BO14633 110 aa4.6□□□□□ -1.67
PCDH11X-201ENST00000298274 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
PCDH11X-201ENST00000298274 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
PCDH11X-201ENST00000298274 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
PCDH11X-201ENST00000298274 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
PCDH11X-201ENST00000298274 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
PCDH11X-201ENST00000298274 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-201ENST00000298274 SPRR2EP22531 72 aa4.42□□□□□ -1.7
PCDH11X-201ENST00000298274 SPRR2BP35325 72 aa4.42□□□□□ -1.7
PCDH11X-201ENST00000298274 SPRR2AP35326 72 aa4.42□□□□□ -1.7
PCDH11X-201ENST00000298274 MT1GP13640 62 aa4.37□□□□□ -1.71
PCDH11X-201ENST00000298274 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
PCDH11X-201ENST00000298274 SPRR2DP22532 72 aa4.31□□□□□ -1.72
PCDH11X-201ENST00000298274 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
PCDH11X-201ENST00000298274 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
PCDH11X-201ENST00000298274 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
PCDH11X-201ENST00000298274 MT1EP04732 61 aa4.2□□□□□ -1.74
PCDH11X-201ENST00000298274 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
PCDH11X-201ENST00000298274 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
PCDH11X-201ENST00000298274 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms