RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-201ENST00000297423 PKHD1P08F94 4074 aa7.82□□□□□ -1.16
SPIDR-201ENST00000297423 KMT2CQ8NEZ4 4911 aaKnown RBP7.82□□□□□ -1.16
SPIDR-201ENST00000297423 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
SPIDR-201ENST00000297423 VPS13BQ7Z7G8 4022 aa7.78□□□□□ -1.16
SPIDR-201ENST00000297423 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
SPIDR-201ENST00000297423 FAT1Q14517 4588 aa7.75□□□□□ -1.17
SPIDR-201ENST00000297423 S4R3F8 94 aa7.75□□□□□ -1.17
SPIDR-201ENST00000297423 APOBP04114 4563 aaKnown RBP7.7□□□□□ -1.18
SPIDR-201ENST00000297423 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
SPIDR-201ENST00000297423 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
SPIDR-201ENST00000297423 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-201ENST00000297423 RYR3Q15413 4870 aa7.59□□□□□ -1.19
SPIDR-201ENST00000297423 J3QL48 77 aa7.57□□□□□ -1.2
SPIDR-201ENST00000297423 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
SPIDR-201ENST00000297423 RYR1P21817 5038 aa7.51□□□□□ -1.21
SPIDR-201ENST00000297423 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
SPIDR-201ENST00000297423 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
SPIDR-201ENST00000297423 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
SPIDR-201ENST00000297423 M0QZ58 72 aa7.49□□□□□ -1.21
SPIDR-201ENST00000297423 HSPG2P98160 4391 aa7.49□□□□□ -1.21
SPIDR-201ENST00000297423 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
SPIDR-201ENST00000297423 R4GN34 69 aa7.48□□□□□ -1.21
SPIDR-201ENST00000297423 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
SPIDR-201ENST00000297423 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
SPIDR-201ENST00000297423 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
SPIDR-201ENST00000297423 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.21
SPIDR-201ENST00000297423 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
SPIDR-201ENST00000297423 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
SPIDR-201ENST00000297423 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
SPIDR-201ENST00000297423 LRP1Q07954 4544 aaKnown RBP7.42□□□□□ -1.22
SPIDR-201ENST00000297423 XP32Q5T750 250 aa7.38□□□□□ -1.23
SPIDR-201ENST00000297423 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
SPIDR-201ENST00000297423 PLAC4Q8WY50 150 aa7.34□□□□□ -1.24
SPIDR-201ENST00000297423 PKHD1L1Q86WI1 4243 aa7.31□□□□□ -1.24
SPIDR-201ENST00000297423 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
SPIDR-201ENST00000297423 TNXBP22105 4242 aa7.23□□□□□ -1.25
SPIDR-201ENST00000297423 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
SPIDR-201ENST00000297423 M0R2T5 61 aa7.16□□□□□ -1.26
SPIDR-201ENST00000297423 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
SPIDR-201ENST00000297423 HERC2O95714 4834 aa7.07□□□□□ -1.28
SPIDR-201ENST00000297423 ABCA13Q86UQ4 5058 aa7.02□□□□□ -1.29
SPIDR-201ENST00000297423 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
SPIDR-201ENST00000297423 LRP2P98164 4655 aa6.92□□□□□ -1.3
SPIDR-201ENST00000297423 LPAP08519 4548 aa6.87□□□□□ -1.31
SPIDR-201ENST00000297423 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
SPIDR-201ENST00000297423 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
SPIDR-201ENST00000297423 TNP1P09430 55 aa6.77□□□□□ -1.33
SPIDR-201ENST00000297423 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
SPIDR-201ENST00000297423 HERC1Q15751 4861 aa6.63□□□□□ -1.35
SPIDR-201ENST00000297423 HMCN2Q8NDA2 5059 aa6.53□□□□□ -1.36
SPIDR-201ENST00000297423 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
SPIDR-201ENST00000297423 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.37
SPIDR-201ENST00000297423 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
SPIDR-201ENST00000297423 MUC2Q02817 5179 aa6.39□□□□□ -1.39
SPIDR-201ENST00000297423 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
SPIDR-201ENST00000297423 MT1HP80294 61 aa6.31□□□□□ -1.4
SPIDR-201ENST00000297423 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
SPIDR-201ENST00000297423 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SPIDR-201ENST00000297423 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
SPIDR-201ENST00000297423 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
SPIDR-201ENST00000297423 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
SPIDR-201ENST00000297423 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
SPIDR-201ENST00000297423 MT2AP02795 61 aa6.11□□□□□ -1.43
SPIDR-201ENST00000297423 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
SPIDR-201ENST00000297423 MT1FP04733 61 aa6.07□□□□□ -1.44
SPIDR-201ENST00000297423 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
SPIDR-201ENST00000297423 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
SPIDR-201ENST00000297423 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
SPIDR-201ENST00000297423 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
SPIDR-201ENST00000297423 INE1O15225 51 aa6.01□□□□□ -1.45
SPIDR-201ENST00000297423 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
SPIDR-201ENST00000297423 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
SPIDR-201ENST00000297423 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
SPIDR-201ENST00000297423 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
SPIDR-201ENST00000297423 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
SPIDR-201ENST00000297423 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
SPIDR-201ENST00000297423 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
SPIDR-201ENST00000297423 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
SPIDR-201ENST00000297423 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
SPIDR-201ENST00000297423 MT1BP07438 61 aa5.74□□□□□ -1.49
SPIDR-201ENST00000297423 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
SPIDR-201ENST00000297423 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.51
SPIDR-201ENST00000297423 LCE2BO14633 110 aa5.64□□□□□ -1.51
SPIDR-201ENST00000297423 MT1XP80297 61 aa5.6□□□□□ -1.51
SPIDR-201ENST00000297423 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
SPIDR-201ENST00000297423 KMT2DO14686 5537 aa5.54□□□□□ -1.52
SPIDR-201ENST00000297423 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
SPIDR-201ENST00000297423 USH2AO75445 5202 aa5.51□□□□□ -1.53
SPIDR-201ENST00000297423 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
SPIDR-201ENST00000297423 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SPIDR-201ENST00000297423 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
SPIDR-201ENST00000297423 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
SPIDR-201ENST00000297423 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
SPIDR-201ENST00000297423 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
SPIDR-201ENST00000297423 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
SPIDR-201ENST00000297423 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
SPIDR-201ENST00000297423 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
SPIDR-201ENST00000297423 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
SPIDR-201ENST00000297423 KRTAP9-2Q9BYQ4 174 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms