RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 A0A087X002 238 aa2.49□□□□□ -2.01
RAPGEF6-201ENST00000296859 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
RAPGEF6-201ENST00000296859 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
RAPGEF6-201ENST00000296859 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
RAPGEF6-201ENST00000296859 KRTAP21-3Q3LHN1 58 aa2.48□□□□□ -2.01
RAPGEF6-201ENST00000296859 Q6ZR54 194 aa2.47□□□□□ -2.01
RAPGEF6-201ENST00000296859 PRAC1Q96KF2 57 aa2.46□□□□□ -2.02
RAPGEF6-201ENST00000296859 LRP1Q07954 4544 aaKnown RBP2.45□□□□□ -2.02
RAPGEF6-201ENST00000296859 NSD1Q96L73 2696 aaPredicted RBP2.45□□□□□ -2.02
RAPGEF6-201ENST00000296859 A8MU10 97 aa2.44□□□□□ -2.02
RAPGEF6-201ENST00000296859 GCN1Q92616 2671 aaKnown RBP2.43□□□□□ -2.02
RAPGEF6-201ENST00000296859 A6NN06 94 aa2.43□□□□□ -2.02
RAPGEF6-201ENST00000296859 LCE2AQ5TA79 106 aaPredicted RBP2.41□□□□□ -2.02
RAPGEF6-201ENST00000296859 Q5VV11 94 aa2.41□□□□□ -2.02
RAPGEF6-201ENST00000296859 Q75L30 129 aa2.41□□□□□ -2.02
RAPGEF6-201ENST00000296859 TENM3Q9P273 2699 aa2.4□□□□□ -2.02
RAPGEF6-201ENST00000296859 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.03
RAPGEF6-201ENST00000296859 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
RAPGEF6-201ENST00000296859 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
RAPGEF6-201ENST00000296859 RYR2Q92736 4967 aa2.39□□□□□ -2.03
RAPGEF6-201ENST00000296859 KRTAP26-1Q6PEX3 210 aa2.38□□□□□ -2.03
RAPGEF6-201ENST00000296859 KRTAP4-16G5E9R7 235 aaPredicted RBP2.38□□□□□ -2.03
RAPGEF6-201ENST00000296859 OCR1Q9BZK8 76 aa2.38□□□□□ -2.03
RAPGEF6-201ENST00000296859 SPRR1AP35321 89 aa2.38□□□□□ -2.03
RAPGEF6-201ENST00000296859 EPPK1P58107 5090 aaKnown RBP2.38□□□□□ -2.03
RAPGEF6-201ENST00000296859 LORP23490 312 aaPredicted RBP2.36□□□□□ -2.03
RAPGEF6-201ENST00000296859 RPS29P62273 56 aaKnown RBP2.36□□□□□ -2.03
RAPGEF6-201ENST00000296859 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
RAPGEF6-201ENST00000296859 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.03
RAPGEF6-201ENST00000296859 ASB16-AS1Q495Z4 193 aa2.34□□□□□ -2.03
RAPGEF6-201ENST00000296859 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.04
RAPGEF6-201ENST00000296859 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
RAPGEF6-201ENST00000296859 ITPR2Q14571 2701 aa2.33□□□□□ -2.04
RAPGEF6-201ENST00000296859 XP32Q5T750 250 aa2.33□□□□□ -2.04
RAPGEF6-201ENST00000296859 BIRC6Q9NR09 4857 aa2.32□□□□□ -2.04
RAPGEF6-201ENST00000296859 KRTAP16-1A8MUX0 517 aa2.32□□□□□ -2.04
RAPGEF6-201ENST00000296859 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
RAPGEF6-201ENST00000296859 TPRXLQ17RH7 258 aa2.3□□□□□ -2.04
RAPGEF6-201ENST00000296859 KRTAP29-1A8MX34 341 aaPredicted RBP2.28□□□□□ -2.04
RAPGEF6-201ENST00000296859 FAT4Q6V0I7 4981 aa2.28□□□□□ -2.04
RAPGEF6-201ENST00000296859 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
RAPGEF6-201ENST00000296859 KRTAP11-1Q8IUC1 163 aa2.28□□□□□ -2.04
RAPGEF6-201ENST00000296859 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
RAPGEF6-201ENST00000296859 LRP2P98164 4655 aa2.27□□□□□ -2.05
RAPGEF6-201ENST00000296859 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
RAPGEF6-201ENST00000296859 H0YAA0 97 aa2.23□□□□□ -2.05
RAPGEF6-201ENST00000296859 HMCN2Q8NDA2 5059 aa2.23□□□□□ -2.05
RAPGEF6-201ENST00000296859 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
RAPGEF6-201ENST00000296859 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
RAPGEF6-201ENST00000296859 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
RAPGEF6-201ENST00000296859 KRTAP15-1Q3LI76 137 aa2.16□□□□□ -2.06
RAPGEF6-201ENST00000296859 KRTAP1-4P0C5Y4 121 aa2.15□□□□□ -2.07
RAPGEF6-201ENST00000296859 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
RAPGEF6-201ENST00000296859 KRTAP7-1Q8IUC3 87 aa2.14□□□□□ -2.07
RAPGEF6-201ENST00000296859 KRTAP10-6P60371 365 aaPredicted RBP2.12□□□□□ -2.07
RAPGEF6-201ENST00000296859 KMT2DO14686 5537 aa2.11□□□□□ -2.07
RAPGEF6-201ENST00000296859 HERC2O95714 4834 aa2.05□□□□□ -2.08
RAPGEF6-201ENST00000296859 USH2AO75445 5202 aa2.05□□□□□ -2.08
RAPGEF6-201ENST00000296859 KRTAP8-1Q8IUC2 63 aa2.03□□□□□ -2.08
RAPGEF6-201ENST00000296859 KRTAP10-12P60413 245 aa2.01□□□□□ -2.09
RAPGEF6-201ENST00000296859 KRTAP13-4Q3LI77 160 aa2.01□□□□□ -2.09
RAPGEF6-201ENST00000296859 KIAA1109Q2LD37 5005 aa2□□□□□ -2.09
RAPGEF6-201ENST00000296859 KRTAP10-5P60370 271 aa1.99□□□□□ -2.09
RAPGEF6-201ENST00000296859 KRTAP10-7P60409 375 aaPredicted RBP1.97□□□□□ -2.09
RAPGEF6-201ENST00000296859 KRTAP23-1A1A580 65 aa1.97□□□□□ -2.09
RAPGEF6-201ENST00000296859 KRTAP4-5Q9BYR2 181 aa1.97□□□□□ -2.09
RAPGEF6-201ENST00000296859 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
RAPGEF6-201ENST00000296859 KRTAP12-1P59990 96 aa1.9□□□□□ -2.1
RAPGEF6-201ENST00000296859 KRTAP3-1Q9BYR8 98 aa1.9□□□□□ -2.11
RAPGEF6-201ENST00000296859 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
RAPGEF6-201ENST00000296859 SSPOA2VEC9 5147 aa1.88□□□□□ -2.11
RAPGEF6-201ENST00000296859 SPRR5A0A1B0GTR4 108 aa1.88□□□□□ -2.11
RAPGEF6-201ENST00000296859 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
RAPGEF6-201ENST00000296859 SPRR2EP22531 72 aa1.86□□□□□ -2.11
RAPGEF6-201ENST00000296859 SPRR2BP35325 72 aa1.86□□□□□ -2.11
RAPGEF6-201ENST00000296859 SPRR2AP35326 72 aa1.86□□□□□ -2.11
RAPGEF6-201ENST00000296859 LCE4AQ5TA78 99 aa1.86□□□□□ -2.11
RAPGEF6-201ENST00000296859 LCE3BQ5TA77 95 aa1.85□□□□□ -2.11
RAPGEF6-201ENST00000296859 KRTAP19-4Q3LI73 84 aa1.85□□□□□ -2.11
RAPGEF6-201ENST00000296859 LOC100996750A0A140TA64 210 aa1.83□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP4-6Q9BYQ5 205 aa1.83□□□□□ -2.12
RAPGEF6-201ENST00000296859 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
RAPGEF6-201ENST00000296859 SPRR2DP22532 72 aa1.81□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP19-1Q8IUB9 90 aa1.81□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP9-6A0A140TA67 174 aa1.8□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP9-7A8MTY7 169 aa1.79□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.78□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP9-2Q9BYQ4 174 aa1.78□□□□□ -2.12
RAPGEF6-201ENST00000296859 KRTAP4-8Q9BYQ9 185 aa1.77□□□□□ -2.13
RAPGEF6-201ENST00000296859 INE1O15225 51 aa1.76□□□□□ -2.13
RAPGEF6-201ENST00000296859 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
RAPGEF6-201ENST00000296859 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
RAPGEF6-201ENST00000296859 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
RAPGEF6-201ENST00000296859 MT1HP80294 61 aa1.72□□□□□ -2.13
RAPGEF6-201ENST00000296859 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
RAPGEF6-201ENST00000296859 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
RAPGEF6-201ENST00000296859 KRTAP9-9Q9BYP9 154 aa1.7□□□□□ -2.14
RAPGEF6-201ENST00000296859 KRTAP9-4Q9BYQ2 154 aa1.7□□□□□ -2.14
RAPGEF6-201ENST00000296859 MT2AP02795 61 aa1.67□□□□□ -2.14
RAPGEF6-201ENST00000296859 MT4P47944 62 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms