RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
ARHGEF3-201ENST00000296315 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
ARHGEF3-201ENST00000296315 KMT2CQ8NEZ4 4911 aaKnown RBP5.27□□□□□ -1.57
ARHGEF3-201ENST00000296315 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
ARHGEF3-201ENST00000296315 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
ARHGEF3-201ENST00000296315 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
ARHGEF3-201ENST00000296315 PKD1P98161 4303 aa5.25□□□□□ -1.57
ARHGEF3-201ENST00000296315 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
ARHGEF3-201ENST00000296315 SACSQ9NZJ4 4579 aa5.25□□□□□ -1.57
ARHGEF3-201ENST00000296315 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
ARHGEF3-201ENST00000296315 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.57
ARHGEF3-201ENST00000296315 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
ARHGEF3-201ENST00000296315 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
ARHGEF3-201ENST00000296315 Q5VSD8 79 aa5.17□□□□□ -1.58
ARHGEF3-201ENST00000296315 M0QZ58 72 aa5.16□□□□□ -1.58
ARHGEF3-201ENST00000296315 FAT3Q8TDW7 4589 aa5.14□□□□□ -1.59
ARHGEF3-201ENST00000296315 XP32Q5T750 250 aa5.13□□□□□ -1.59
ARHGEF3-201ENST00000296315 HSPG2P98160 4391 aa5.12□□□□□ -1.59
ARHGEF3-201ENST00000296315 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
ARHGEF3-201ENST00000296315 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
ARHGEF3-201ENST00000296315 KIAA1109Q2LD37 5005 aa5.11□□□□□ -1.59
ARHGEF3-201ENST00000296315 R4GN34 69 aa5.11□□□□□ -1.59
ARHGEF3-201ENST00000296315 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
ARHGEF3-201ENST00000296315 RYR2Q92736 4967 aa5.07□□□□□ -1.6
ARHGEF3-201ENST00000296315 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
ARHGEF3-201ENST00000296315 RYR3Q15413 4870 aa5.03□□□□□ -1.6
ARHGEF3-201ENST00000296315 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
ARHGEF3-201ENST00000296315 KRTAP21-3Q3LHN1 58 aa5.02□□□□□ -1.61
ARHGEF3-201ENST00000296315 RYR1P21817 5038 aa5.01□□□□□ -1.61
ARHGEF3-201ENST00000296315 LPAP08519 4548 aa5□□□□□ -1.61
ARHGEF3-201ENST00000296315 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
ARHGEF3-201ENST00000296315 LRP2P98164 4655 aa4.99□□□□□ -1.61
ARHGEF3-201ENST00000296315 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
ARHGEF3-201ENST00000296315 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
ARHGEF3-201ENST00000296315 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
ARHGEF3-201ENST00000296315 LORP23490 312 aaPredicted RBP4.91□□□□□ -1.62
ARHGEF3-201ENST00000296315 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
ARHGEF3-201ENST00000296315 J3QL48 77 aa4.88□□□□□ -1.63
ARHGEF3-201ENST00000296315 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
ARHGEF3-201ENST00000296315 TNXBP22105 4242 aa4.82□□□□□ -1.64
ARHGEF3-201ENST00000296315 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
ARHGEF3-201ENST00000296315 MUC2Q02817 5179 aa4.78□□□□□ -1.64
ARHGEF3-201ENST00000296315 HERC2O95714 4834 aa4.67□□□□□ -1.66
ARHGEF3-201ENST00000296315 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
ARHGEF3-201ENST00000296315 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
ARHGEF3-201ENST00000296315 TNP1P09430 55 aa4.64□□□□□ -1.67
ARHGEF3-201ENST00000296315 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
ARHGEF3-201ENST00000296315 HERC1Q15751 4861 aa4.58□□□□□ -1.68
ARHGEF3-201ENST00000296315 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
ARHGEF3-201ENST00000296315 FAT4Q6V0I7 4981 aa4.51□□□□□ -1.69
ARHGEF3-201ENST00000296315 M0R2T5 61 aa4.51□□□□□ -1.69
ARHGEF3-201ENST00000296315 PCLOQ9Y6V0 5065 aa4.46□□□□□ -1.7
ARHGEF3-201ENST00000296315 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.7
ARHGEF3-201ENST00000296315 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
ARHGEF3-201ENST00000296315 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
ARHGEF3-201ENST00000296315 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
ARHGEF3-201ENST00000296315 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
ARHGEF3-201ENST00000296315 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
ARHGEF3-201ENST00000296315 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
ARHGEF3-201ENST00000296315 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
ARHGEF3-201ENST00000296315 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
ARHGEF3-201ENST00000296315 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
ARHGEF3-201ENST00000296315 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
ARHGEF3-201ENST00000296315 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
ARHGEF3-201ENST00000296315 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
ARHGEF3-201ENST00000296315 INE1O15225 51 aa4.11□□□□□ -1.75
ARHGEF3-201ENST00000296315 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
ARHGEF3-201ENST00000296315 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
ARHGEF3-201ENST00000296315 LCE2CQ5TA81 110 aa4.07□□□□□ -1.76
ARHGEF3-201ENST00000296315 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
ARHGEF3-201ENST00000296315 MT1HP80294 61 aa4.07□□□□□ -1.76
ARHGEF3-201ENST00000296315 USH2AO75445 5202 aa4.07□□□□□ -1.76
ARHGEF3-201ENST00000296315 MT1FP04733 61 aa4.05□□□□□ -1.76
ARHGEF3-201ENST00000296315 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
ARHGEF3-201ENST00000296315 MT2AP02795 61 aa4□□□□□ -1.77
ARHGEF3-201ENST00000296315 KMT2DO14686 5537 aa3.99□□□□□ -1.77
ARHGEF3-201ENST00000296315 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
ARHGEF3-201ENST00000296315 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
ARHGEF3-201ENST00000296315 MT1XP80297 61 aa3.94□□□□□ -1.78
ARHGEF3-201ENST00000296315 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.79
ARHGEF3-201ENST00000296315 MT1BP07438 61 aa3.88□□□□□ -1.79
ARHGEF3-201ENST00000296315 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
ARHGEF3-201ENST00000296315 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
ARHGEF3-201ENST00000296315 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
ARHGEF3-201ENST00000296315 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
ARHGEF3-201ENST00000296315 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
ARHGEF3-201ENST00000296315 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
ARHGEF3-201ENST00000296315 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
ARHGEF3-201ENST00000296315 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.81
ARHGEF3-201ENST00000296315 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
ARHGEF3-201ENST00000296315 LCE2BO14633 110 aa3.69□□□□□ -1.82
ARHGEF3-201ENST00000296315 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
ARHGEF3-201ENST00000296315 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
ARHGEF3-201ENST00000296315 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
ARHGEF3-201ENST00000296315 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
ARHGEF3-201ENST00000296315 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
ARHGEF3-201ENST00000296315 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
ARHGEF3-201ENST00000296315 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
ARHGEF3-201ENST00000296315 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
ARHGEF3-201ENST00000296315 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 286.7 ms