RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
RPN1-201ENST00000296255 Q5VSD8 79 aa8.58□□□□□ -1.04
RPN1-201ENST00000296255 XP32Q5T750 250 aa8.55□□□□□ -1.04
RPN1-201ENST00000296255 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
RPN1-201ENST00000296255 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
RPN1-201ENST00000296255 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
RPN1-201ENST00000296255 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
RPN1-201ENST00000296255 RYR3Q15413 4870 aa8.49□□□□□ -1.05
RPN1-201ENST00000296255 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
RPN1-201ENST00000296255 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
RPN1-201ENST00000296255 RYR1P21817 5038 aa8.44□□□□□ -1.06
RPN1-201ENST00000296255 KRTAP25-1Q3LHN0 102 aa8.43□□□□□ -1.06
RPN1-201ENST00000296255 S4R3F8 94 aa8.43□□□□□ -1.06
RPN1-201ENST00000296255 K7ERS5 55 aa8.41□□□□□ -1.06
RPN1-201ENST00000296255 MT1HL1P0DM35 61 aa8.4□□□□□ -1.07
RPN1-201ENST00000296255 A0A0D9SG42 100 aa8.35□□□□□ -1.07
RPN1-201ENST00000296255 P0C880 135 aa8.34□□□□□ -1.07
RPN1-201ENST00000296255 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
RPN1-201ENST00000296255 KIAA1109Q2LD37 5005 aa8.32□□□□□ -1.08
RPN1-201ENST00000296255 LPAP08519 4548 aa8.31□□□□□ -1.08
RPN1-201ENST00000296255 ROMO1P60602 79 aa8.29□□□□□ -1.08
RPN1-201ENST00000296255 LRP2P98164 4655 aa8.25□□□□□ -1.09
RPN1-201ENST00000296255 EPPK1P58107 5090 aaKnown RBP8.2□□□□□ -1.1
RPN1-201ENST00000296255 TPRXLQ17RH7 258 aa8.18□□□□□ -1.1
RPN1-201ENST00000296255 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
RPN1-201ENST00000296255 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
RPN1-201ENST00000296255 ABCA13Q86UQ4 5058 aa8.06□□□□□ -1.12
RPN1-201ENST00000296255 C10orf95Q9H7T3 257 aa8.04□□□□□ -1.12
RPN1-201ENST00000296255 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
RPN1-201ENST00000296255 M0QZ58 72 aa8.02□□□□□ -1.13
RPN1-201ENST00000296255 KRTAP4-5Q9BYR2 181 aa8.02□□□□□ -1.13
RPN1-201ENST00000296255 H3BS24 57 aa7.92□□□□□ -1.14
RPN1-201ENST00000296255 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
RPN1-201ENST00000296255 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
RPN1-201ENST00000296255 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
RPN1-201ENST00000296255 R4GN34 69 aa7.81□□□□□ -1.16
RPN1-201ENST00000296255 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
RPN1-201ENST00000296255 BIRC6Q9NR09 4857 aa7.75□□□□□ -1.17
RPN1-201ENST00000296255 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
RPN1-201ENST00000296255 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
RPN1-201ENST00000296255 J3QL48 77 aa7.68□□□□□ -1.18
RPN1-201ENST00000296255 HERC2O95714 4834 aa7.68□□□□□ -1.18
RPN1-201ENST00000296255 MUC2Q02817 5179 aa7.54□□□□□ -1.2
RPN1-201ENST00000296255 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
RPN1-201ENST00000296255 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
RPN1-201ENST00000296255 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
RPN1-201ENST00000296255 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
RPN1-201ENST00000296255 HERC1Q15751 4861 aa7.36□□□□□ -1.23
RPN1-201ENST00000296255 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
RPN1-201ENST00000296255 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
RPN1-201ENST00000296255 HMCN2Q8NDA2 5059 aa7.26□□□□□ -1.25
RPN1-201ENST00000296255 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
RPN1-201ENST00000296255 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
RPN1-201ENST00000296255 TNP1P09430 55 aa7.15□□□□□ -1.27
RPN1-201ENST00000296255 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
RPN1-201ENST00000296255 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.28
RPN1-201ENST00000296255 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
RPN1-201ENST00000296255 MT1HP80294 61 aa7.01□□□□□ -1.29
RPN1-201ENST00000296255 M0R2T5 61 aa6.99□□□□□ -1.29
RPN1-201ENST00000296255 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
RPN1-201ENST00000296255 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
RPN1-201ENST00000296255 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
RPN1-201ENST00000296255 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
RPN1-201ENST00000296255 MT1FP04733 61 aa6.93□□□□□ -1.3
RPN1-201ENST00000296255 MT2AP02795 61 aa6.92□□□□□ -1.3
RPN1-201ENST00000296255 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
RPN1-201ENST00000296255 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
RPN1-201ENST00000296255 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
RPN1-201ENST00000296255 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
RPN1-201ENST00000296255 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
RPN1-201ENST00000296255 MT1BP07438 61 aa6.71□□□□□ -1.33
RPN1-201ENST00000296255 KRTAP10-5P60370 271 aa6.68□□□□□ -1.34
RPN1-201ENST00000296255 MT1XP80297 61 aa6.67□□□□□ -1.34
RPN1-201ENST00000296255 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
RPN1-201ENST00000296255 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
RPN1-201ENST00000296255 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
RPN1-201ENST00000296255 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
RPN1-201ENST00000296255 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
RPN1-201ENST00000296255 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
RPN1-201ENST00000296255 LCE2BO14633 110 aa6.32□□□□□ -1.4
RPN1-201ENST00000296255 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
RPN1-201ENST00000296255 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
RPN1-201ENST00000296255 USH2AO75445 5202 aa6.18□□□□□ -1.42
RPN1-201ENST00000296255 KMT2DO14686 5537 aa6.11□□□□□ -1.43
RPN1-201ENST00000296255 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
RPN1-201ENST00000296255 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
RPN1-201ENST00000296255 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
RPN1-201ENST00000296255 INE1O15225 51 aa6□□□□□ -1.45
RPN1-201ENST00000296255 KRTAP19-7Q3SYF9 63 aa5.95□□□□□ -1.46
RPN1-201ENST00000296255 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
RPN1-201ENST00000296255 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
RPN1-201ENST00000296255 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
RPN1-201ENST00000296255 SSPOA2VEC9 5147 aa5.78□□□□□ -1.48
RPN1-201ENST00000296255 MT1LQ93083 61 aa5.77□□□□□ -1.49
RPN1-201ENST00000296255 MT1EP04732 61 aa5.76□□□□□ -1.49
RPN1-201ENST00000296255 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
RPN1-201ENST00000296255 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
RPN1-201ENST00000296255 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
RPN1-201ENST00000296255 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
RPN1-201ENST00000296255 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms