RNA–Protein interactions for RNA: ENST00000296031.4

CXCL2-201, Transcript of C-X-C motif chemokine ligand 2, humanhuman

TSL 1 (best)

Gene CXCL2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL2-201ENST00000296031 IMUPQ9GZP8 106 aa11.51□□□□□ -0.57
CXCL2-201ENST00000296031 KRTAP19-1Q8IUB9 90 aa11.48□□□□□ -0.57
CXCL2-201ENST00000296031 H3BPC8 53 aa11.47□□□□□ -0.57
CXCL2-201ENST00000296031 MT-ATP8P03928 68 aa11.47□□□□□ -0.57
CXCL2-201ENST00000296031 A8MUN3 132 aa11.46□□□□□ -0.57
CXCL2-201ENST00000296031 NDUFC1O43677 76 aa11.39□□□□□ -0.59
CXCL2-201ENST00000296031 FCGBPQ9Y6R7 5405 aaPredicted RBP11.36□□□□□ -0.59
CXCL2-201ENST00000296031 KRTAP19-6Q3LI70 58 aa11.31□□□□□ -0.6
CXCL2-201ENST00000296031 SMIM20Q8N5G0 67 aa11.29□□□□□ -0.6
CXCL2-201ENST00000296031 TRAV7A0A075B6U4 112 aa11.27□□□□□ -0.61
CXCL2-201ENST00000296031 SPRR2GQ9BYE4 73 aa11.26□□□□□ -0.61
CXCL2-201ENST00000296031 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.25□□□□□ -0.61
CXCL2-201ENST00000296031 H0YAA0 97 aa11.21□□□□□ -0.61
CXCL2-201ENST00000296031 DMAC1Q96GE9 116 aa11.21□□□□□ -0.61
CXCL2-201ENST00000296031 CRIPTQ9P021 101 aa11.18□□□□□ -0.62
CXCL2-201ENST00000296031 KRTAP19-8Q3LI54 63 aa11.14□□□□□ -0.63
CXCL2-201ENST00000296031 Q5VV11 94 aa11.14□□□□□ -0.63
CXCL2-201ENST00000296031 MT1BP07438 61 aa11.11□□□□□ -0.63
CXCL2-201ENST00000296031 ADM2Q7Z4H4 148 aa11.11□□□□□ -0.63
CXCL2-201ENST00000296031 KRTAP9-7A8MTY7 169 aa11.04□□□□□ -0.64
CXCL2-201ENST00000296031 MACF1Q9UPN3 7388 aaKnown RBP11.01□□□□□ -0.65
CXCL2-201ENST00000296031 SNURFQ9Y675 71 aa11.01□□□□□ -0.65
CXCL2-201ENST00000296031 ACYP2P14621 99 aa11□□□□□ -0.65
CXCL2-201ENST00000296031 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
CXCL2-201ENST00000296031 C20orf197Q8N268 126 aa10.93□□□□□ -0.66
CXCL2-201ENST00000296031 A6NN06 94 aa10.92□□□□□ -0.66
CXCL2-201ENST00000296031 P0C880 135 aa10.88□□□□□ -0.67
CXCL2-201ENST00000296031 SYNE2Q8WXH0 6885 aaKnown RBP10.85□□□□□ -0.67
CXCL2-201ENST00000296031 SPANXA2-OT1Q8N9U9 137 aa10.84□□□□□ -0.67
CXCL2-201ENST00000296031 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
CXCL2-201ENST00000296031 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
CXCL2-201ENST00000296031 CHKB-CPT1BH3BT56 60 aa10.81□□□□□ -0.68
CXCL2-201ENST00000296031 KRTAP10-5P60370 271 aa10.81□□□□□ -0.68
CXCL2-201ENST00000296031 R4GN34 69 aa10.81□□□□□ -0.68
CXCL2-201ENST00000296031 M0QZ58 72 aa10.74□□□□□ -0.69
CXCL2-201ENST00000296031 COX7CP15954 63 aa10.7□□□□□ -0.7
CXCL2-201ENST00000296031 PLAC4Q8WY50 150 aa10.63□□□□□ -0.71
CXCL2-201ENST00000296031 KRTAP6-3Q3LI67 103 aa10.59□□□□□ -0.71
CXCL2-201ENST00000296031 LINC01554Q52M75 96 aa10.59□□□□□ -0.71
CXCL2-201ENST00000296031 COA5Q86WW8 74 aa10.51□□□□□ -0.73
CXCL2-201ENST00000296031 PRO2289Q9P1D8 64 aa10.51□□□□□ -0.73
CXCL2-201ENST00000296031 CYSTM1Q9H1C7 97 aa10.49□□□□□ -0.73
CXCL2-201ENST00000296031 H7BZZ5 65 aa10.48□□□□□ -0.73
CXCL2-201ENST00000296031 MT1XP80297 61 aa10.48□□□□□ -0.73
CXCL2-201ENST00000296031 ANAPC13Q9BS18 74 aa10.45□□□□□ -0.74
CXCL2-201ENST00000296031 SEC61GP60059 68 aa10.26□□□□□ -0.77
CXCL2-201ENST00000296031 KRTAP13-4Q3LI77 160 aa10.26□□□□□ -0.77
CXCL2-201ENST00000296031 CCDC179H3BU77 68 aa10.23□□□□□ -0.77
CXCL2-201ENST00000296031 SERP1Q9Y6X1 66 aa10.23□□□□□ -0.77
CXCL2-201ENST00000296031 KRTAP5-9P26371 169 aa10.21□□□□□ -0.77
CXCL2-201ENST00000296031 KRTAP12-2P59991 146 aa10.18□□□□□ -0.78
CXCL2-201ENST00000296031 NEBP20929 6669 aa10.17□□□□□ -0.78
CXCL2-201ENST00000296031 KMT2DO14686 5537 aa10.14□□□□□ -0.79
CXCL2-201ENST00000296031 MUC12Q9UKN1 5478 aa10.14□□□□□ -0.79
CXCL2-201ENST00000296031 A0A1B0GU33 70 aa10.06□□□□□ -0.8
CXCL2-201ENST00000296031 KRTAP8-1Q8IUC2 63 aa10.03□□□□□ -0.8
CXCL2-201ENST00000296031 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
CXCL2-201ENST00000296031 KRTAP10-7P60409 375 aaPredicted RBP10.02□□□□□ -0.81
CXCL2-201ENST00000296031 SPATA8Q6RVD6 105 aa10.02□□□□□ -0.81
CXCL2-201ENST00000296031 A0A0D9SG42 100 aa10.01□□□□□ -0.81
CXCL2-201ENST00000296031 SPRR2FQ96RM1 72 aa10□□□□□ -0.81
CXCL2-201ENST00000296031 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
CXCL2-201ENST00000296031 A0A1B0GU69 56 aa9.98□□□□□ -0.81
CXCL2-201ENST00000296031 KRTAP4-8A0A0G2JLE6 195 aa9.96□□□□□ -0.82
CXCL2-201ENST00000296031 KRTAP10-12P60413 245 aa9.96□□□□□ -0.82
CXCL2-201ENST00000296031 KRTAP4-8Q9BYQ9 185 aa9.96□□□□□ -0.82
CXCL2-201ENST00000296031 MDN1Q9NU22 5596 aa9.95□□□□□ -0.82
CXCL2-201ENST00000296031 TMEM258P61165 79 aa9.85□□□□□ -0.83
CXCL2-201ENST00000296031 SPINT4Q6UDR6 99 aa9.85□□□□□ -0.83
CXCL2-201ENST00000296031 SPRR2EP22531 72 aa9.79□□□□□ -0.84
CXCL2-201ENST00000296031 SPRR2BP35325 72 aa9.79□□□□□ -0.84
CXCL2-201ENST00000296031 SPRR2AP35326 72 aa9.79□□□□□ -0.84
CXCL2-201ENST00000296031 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
CXCL2-201ENST00000296031 SMIM26A0A096LP01 95 aa9.77□□□□□ -0.85
CXCL2-201ENST00000296031 PRR15LQ9BU68 103 aa9.76□□□□□ -0.85
CXCL2-201ENST00000296031 KRTAP20-1Q3LI63 56 aa9.71□□□□□ -0.86
CXCL2-201ENST00000296031 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.86
CXCL2-201ENST00000296031 A8MU10 97 aa9.69□□□□□ -0.86
CXCL2-201ENST00000296031 LCE1AQ5T7P2 110 aa9.67□□□□□ -0.86
CXCL2-201ENST00000296031 KRTAP2-3P0C7H8 128 aa9.51□□□□□ -0.89
CXCL2-201ENST00000296031 KRTAP2-4Q9BYR9 128 aa9.51□□□□□ -0.89
CXCL2-201ENST00000296031 SPRR2DP22532 72 aa9.47□□□□□ -0.89
CXCL2-201ENST00000296031 UQCR11O14957 56 aa9.44□□□□□ -0.9
CXCL2-201ENST00000296031 KRTAP19-7Q3SYF9 63 aa9.36□□□□□ -0.91
CXCL2-201ENST00000296031 C10orf95Q9H7T3 257 aa9.34□□□□□ -0.91
CXCL2-201ENST00000296031 V9GYY9 64 aa9.29□□□□□ -0.92
CXCL2-201ENST00000296031 MT1EP04732 61 aa9.28□□□□□ -0.92
CXCL2-201ENST00000296031 TNP1P09430 55 aa9.26□□□□□ -0.93
CXCL2-201ENST00000296031 MIR22HGQ0VDD5 57 aa9.25□□□□□ -0.93
CXCL2-201ENST00000296031 Q1T7F1 81 aa9.24□□□□□ -0.93
CXCL2-201ENST00000296031 KRTAP2-2Q9BYT5 123 aa9.22□□□□□ -0.93
CXCL2-201ENST00000296031 KRTAP2-1Q9BYU5 128 aa9.22□□□□□ -0.93
CXCL2-201ENST00000296031 PSPHP1O15172 72 aa9.21□□□□□ -0.94
CXCL2-201ENST00000296031 KRTAP19-5Q3LI72 72 aa9.21□□□□□ -0.94
CXCL2-201ENST00000296031 LCE3BQ5TA77 95 aa9.17□□□□□ -0.94
CXCL2-201ENST00000296031 KRTAP19-3Q7Z4W3 81 aa9.15□□□□□ -0.94
CXCL2-201ENST00000296031 LCE5AQ5TCM9 118 aa9.14□□□□□ -0.95
CXCL2-201ENST00000296031 LCE3AQ5TA76 89 aa9.13□□□□□ -0.95
CXCL2-201ENST00000296031 PCP4P48539 62 aa9.08□□□□□ -0.96
CXCL2-201ENST00000296031 K7ERS5 55 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms