RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
NXF1-201ENST00000294172 UQCR11O14957 56 aa7.33□□□□□ -1.24
NXF1-201ENST00000294172 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
NXF1-201ENST00000294172 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
NXF1-201ENST00000294172 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
NXF1-201ENST00000294172 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
NXF1-201ENST00000294172 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
NXF1-201ENST00000294172 LRP2P98164 4655 aa7.24□□□□□ -1.25
NXF1-201ENST00000294172 LPAP08519 4548 aa7.21□□□□□ -1.26
NXF1-201ENST00000294172 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
NXF1-201ENST00000294172 HERC2O95714 4834 aa7.13□□□□□ -1.27
NXF1-201ENST00000294172 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
NXF1-201ENST00000294172 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
NXF1-201ENST00000294172 A0A1B0GU33 70 aa7.1□□□□□ -1.27
NXF1-201ENST00000294172 H0YAA0 97 aa7.09□□□□□ -1.27
NXF1-201ENST00000294172 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
NXF1-201ENST00000294172 S4R3F8 94 aa7.09□□□□□ -1.27
NXF1-201ENST00000294172 J3QL48 77 aa7.09□□□□□ -1.28
NXF1-201ENST00000294172 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
NXF1-201ENST00000294172 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
NXF1-201ENST00000294172 BIRC6Q9NR09 4857 aa7.02□□□□□ -1.29
NXF1-201ENST00000294172 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
NXF1-201ENST00000294172 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
NXF1-201ENST00000294172 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
NXF1-201ENST00000294172 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
NXF1-201ENST00000294172 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
NXF1-201ENST00000294172 P0C880 135 aa6.88□□□□□ -1.31
NXF1-201ENST00000294172 K7ERS5 55 aa6.85□□□□□ -1.31
NXF1-201ENST00000294172 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
NXF1-201ENST00000294172 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
NXF1-201ENST00000294172 A0A0D9SG42 100 aa6.83□□□□□ -1.32
NXF1-201ENST00000294172 HERC1Q15751 4861 aa6.82□□□□□ -1.32
NXF1-201ENST00000294172 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
NXF1-201ENST00000294172 MUC2Q02817 5179 aa6.78□□□□□ -1.32
NXF1-201ENST00000294172 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
NXF1-201ENST00000294172 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
NXF1-201ENST00000294172 HMCN2Q8NDA2 5059 aa6.7□□□□□ -1.34
NXF1-201ENST00000294172 ROMO1P60602 79 aa6.68□□□□□ -1.34
NXF1-201ENST00000294172 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
NXF1-201ENST00000294172 M0QZ58 72 aa6.64□□□□□ -1.35
NXF1-201ENST00000294172 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
NXF1-201ENST00000294172 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
NXF1-201ENST00000294172 R4GN34 69 aa6.58□□□□□ -1.36
NXF1-201ENST00000294172 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
NXF1-201ENST00000294172 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
NXF1-201ENST00000294172 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
NXF1-201ENST00000294172 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
NXF1-201ENST00000294172 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
NXF1-201ENST00000294172 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
NXF1-201ENST00000294172 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
NXF1-201ENST00000294172 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
NXF1-201ENST00000294172 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
NXF1-201ENST00000294172 M0R2T5 61 aa6.3□□□□□ -1.4
NXF1-201ENST00000294172 MT1HP80294 61 aa6.24□□□□□ -1.41
NXF1-201ENST00000294172 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
NXF1-201ENST00000294172 NDUFAF8A1L188 74 aa6.15□□□□□ -1.43
NXF1-201ENST00000294172 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
NXF1-201ENST00000294172 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
NXF1-201ENST00000294172 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
NXF1-201ENST00000294172 MT2AP02795 61 aa6.08□□□□□ -1.44
NXF1-201ENST00000294172 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
NXF1-201ENST00000294172 MT1FP04733 61 aa6.07□□□□□ -1.44
NXF1-201ENST00000294172 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
NXF1-201ENST00000294172 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
NXF1-201ENST00000294172 TNP1P09430 55 aa5.93□□□□□ -1.46
NXF1-201ENST00000294172 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
NXF1-201ENST00000294172 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
NXF1-201ENST00000294172 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
NXF1-201ENST00000294172 MT1BP07438 61 aa5.8□□□□□ -1.48
NXF1-201ENST00000294172 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
NXF1-201ENST00000294172 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
NXF1-201ENST00000294172 MT1XP80297 61 aa5.7□□□□□ -1.5
NXF1-201ENST00000294172 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
NXF1-201ENST00000294172 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
NXF1-201ENST00000294172 USH2AO75445 5202 aa5.62□□□□□ -1.51
NXF1-201ENST00000294172 LCE2BO14633 110 aa5.62□□□□□ -1.51
NXF1-201ENST00000294172 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
NXF1-201ENST00000294172 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
NXF1-201ENST00000294172 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
NXF1-201ENST00000294172 KRTAP8-1Q8IUC2 63 aa5.48□□□□□ -1.53
NXF1-201ENST00000294172 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
NXF1-201ENST00000294172 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
NXF1-201ENST00000294172 KMT2DO14686 5537 aa5.38□□□□□ -1.55
NXF1-201ENST00000294172 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
NXF1-201ENST00000294172 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
NXF1-201ENST00000294172 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
NXF1-201ENST00000294172 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
NXF1-201ENST00000294172 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
NXF1-201ENST00000294172 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
NXF1-201ENST00000294172 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
NXF1-201ENST00000294172 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
NXF1-201ENST00000294172 INE1O15225 51 aa5.02□□□□□ -1.61
NXF1-201ENST00000294172 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
NXF1-201ENST00000294172 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
NXF1-201ENST00000294172 MT1EP04732 61 aa4.96□□□□□ -1.62
NXF1-201ENST00000294172 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
NXF1-201ENST00000294172 MT1LQ93083 61 aa4.91□□□□□ -1.62
NXF1-201ENST00000294172 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
NXF1-201ENST00000294172 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
NXF1-201ENST00000294172 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms