RNA–Protein interactions for RNA: ENST00000291535.11

UBASH3A-201, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3A, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-201ENST00000291535 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
UBASH3A-201ENST00000291535 RYR1P21817 5038 aa6.4□□□□□ -1.39
UBASH3A-201ENST00000291535 HSPG2P98160 4391 aa6.38□□□□□ -1.39
UBASH3A-201ENST00000291535 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
UBASH3A-201ENST00000291535 SMR3BP02814 79 aaPredicted RBP6.37□□□□□ -1.39
UBASH3A-201ENST00000291535 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.39
UBASH3A-201ENST00000291535 FAT3Q8TDW7 4589 aa6.34□□□□□ -1.39
UBASH3A-201ENST00000291535 H3BS24 57 aa6.32□□□□□ -1.4
UBASH3A-201ENST00000291535 K7ERS5 55 aa6.32□□□□□ -1.4
UBASH3A-201ENST00000291535 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
UBASH3A-201ENST00000291535 ROMO1P60602 79 aa6.3□□□□□ -1.4
UBASH3A-201ENST00000291535 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
UBASH3A-201ENST00000291535 TNXBP22105 4242 aa6.29□□□□□ -1.4
UBASH3A-201ENST00000291535 LRP1Q07954 4544 aaKnown RBP6.27□□□□□ -1.41
UBASH3A-201ENST00000291535 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
UBASH3A-201ENST00000291535 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
UBASH3A-201ENST00000291535 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
UBASH3A-201ENST00000291535 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
UBASH3A-201ENST00000291535 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
UBASH3A-201ENST00000291535 Q5VSD8 79 aa6.2□□□□□ -1.42
UBASH3A-201ENST00000291535 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
UBASH3A-201ENST00000291535 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
UBASH3A-201ENST00000291535 S4R3F8 94 aa6.15□□□□□ -1.43
UBASH3A-201ENST00000291535 HERC1Q15751 4861 aa6.14□□□□□ -1.43
UBASH3A-201ENST00000291535 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
UBASH3A-201ENST00000291535 A0A0D9SG42 100 aa6.13□□□□□ -1.43
UBASH3A-201ENST00000291535 P0C880 135 aa6.13□□□□□ -1.43
UBASH3A-201ENST00000291535 XP32Q5T750 250 aa6.12□□□□□ -1.43
UBASH3A-201ENST00000291535 J3QL48 77 aa6.05□□□□□ -1.44
UBASH3A-201ENST00000291535 KRTAP12-2P59991 146 aa6.04□□□□□ -1.44
UBASH3A-201ENST00000291535 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
UBASH3A-201ENST00000291535 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
UBASH3A-201ENST00000291535 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.45
UBASH3A-201ENST00000291535 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.45
UBASH3A-201ENST00000291535 LPAP08519 4548 aa5.94□□□□□ -1.46
UBASH3A-201ENST00000291535 M0QZ58 72 aa5.94□□□□□ -1.46
UBASH3A-201ENST00000291535 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
UBASH3A-201ENST00000291535 LRP2P98164 4655 aa5.91□□□□□ -1.46
UBASH3A-201ENST00000291535 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
UBASH3A-201ENST00000291535 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
UBASH3A-201ENST00000291535 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
UBASH3A-201ENST00000291535 MUC17Q685J3 4493 aa5.69□□□□□ -1.5
UBASH3A-201ENST00000291535 R4GN34 69 aa5.69□□□□□ -1.5
UBASH3A-201ENST00000291535 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
UBASH3A-201ENST00000291535 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
UBASH3A-201ENST00000291535 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
UBASH3A-201ENST00000291535 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
UBASH3A-201ENST00000291535 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
UBASH3A-201ENST00000291535 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
UBASH3A-201ENST00000291535 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
UBASH3A-201ENST00000291535 FLGP20930 4061 aaPredicted RBP5.47□□□□□ -1.53
UBASH3A-201ENST00000291535 MUC2Q02817 5179 aa5.46□□□□□ -1.54
UBASH3A-201ENST00000291535 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.55
UBASH3A-201ENST00000291535 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
UBASH3A-201ENST00000291535 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
UBASH3A-201ENST00000291535 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
UBASH3A-201ENST00000291535 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
UBASH3A-201ENST00000291535 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
UBASH3A-201ENST00000291535 TNP1P09430 55 aa5.26□□□□□ -1.57
UBASH3A-201ENST00000291535 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.57
UBASH3A-201ENST00000291535 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
UBASH3A-201ENST00000291535 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
UBASH3A-201ENST00000291535 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
UBASH3A-201ENST00000291535 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
UBASH3A-201ENST00000291535 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
UBASH3A-201ENST00000291535 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
UBASH3A-201ENST00000291535 MT1HP80294 61 aa4.97□□□□□ -1.61
UBASH3A-201ENST00000291535 M0R2T5 61 aa4.97□□□□□ -1.61
UBASH3A-201ENST00000291535 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
UBASH3A-201ENST00000291535 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
UBASH3A-201ENST00000291535 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
UBASH3A-201ENST00000291535 MT1FP04733 61 aa4.9□□□□□ -1.63
UBASH3A-201ENST00000291535 MT2AP02795 61 aa4.89□□□□□ -1.63
UBASH3A-201ENST00000291535 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
UBASH3A-201ENST00000291535 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
UBASH3A-201ENST00000291535 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
UBASH3A-201ENST00000291535 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
UBASH3A-201ENST00000291535 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
UBASH3A-201ENST00000291535 MT1XP80297 61 aa4.81□□□□□ -1.64
UBASH3A-201ENST00000291535 MT1BP07438 61 aa4.8□□□□□ -1.64
UBASH3A-201ENST00000291535 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
UBASH3A-201ENST00000291535 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
UBASH3A-201ENST00000291535 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
UBASH3A-201ENST00000291535 INE1O15225 51 aa4.71□□□□□ -1.66
UBASH3A-201ENST00000291535 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
UBASH3A-201ENST00000291535 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.66
UBASH3A-201ENST00000291535 USH2AO75445 5202 aa4.63□□□□□ -1.67
UBASH3A-201ENST00000291535 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
UBASH3A-201ENST00000291535 LCE2BO14633 110 aa4.56□□□□□ -1.68
UBASH3A-201ENST00000291535 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
UBASH3A-201ENST00000291535 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
UBASH3A-201ENST00000291535 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
UBASH3A-201ENST00000291535 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
UBASH3A-201ENST00000291535 KRTAP19-5Q3LI72 72 aa4.49□□□□□ -1.69
UBASH3A-201ENST00000291535 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
UBASH3A-201ENST00000291535 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
UBASH3A-201ENST00000291535 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
UBASH3A-201ENST00000291535 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
UBASH3A-201ENST00000291535 KMT2DO14686 5537 aa4.34□□□□□ -1.71
UBASH3A-201ENST00000291535 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms