RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 H0YAA0 97 aa2.51□□□□□ -2.01
UBR1-201ENST00000290650 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
UBR1-201ENST00000290650 KIAA1109Q2LD37 5005 aa2.51□□□□□ -2.01
UBR1-201ENST00000290650 ABCA13Q86UQ4 5058 aa2.5□□□□□ -2.01
UBR1-201ENST00000290650 PLAC4Q8WY50 150 aa2.5□□□□□ -2.01
UBR1-201ENST00000290650 VPS13DQ5THJ4 4388 aa2.48□□□□□ -2.01
UBR1-201ENST00000290650 DNAH8Q96JB1 4490 aa2.48□□□□□ -2.01
UBR1-201ENST00000290650 P0C880 135 aa2.48□□□□□ -2.01
UBR1-201ENST00000290650 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
UBR1-201ENST00000290650 KRTAP21-3Q3LHN1 58 aa2.47□□□□□ -2.01
UBR1-201ENST00000290650 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.01
UBR1-201ENST00000290650 DNHD1Q96M86 4753 aa2.46□□□□□ -2.02
UBR1-201ENST00000290650 DNAH17Q9UFH2 4485 aa2.45□□□□□ -2.02
UBR1-201ENST00000290650 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
UBR1-201ENST00000290650 KRTAP10-8P60410 259 aa2.44□□□□□ -2.02
UBR1-201ENST00000290650 HERC1Q15751 4861 aa2.43□□□□□ -2.02
UBR1-201ENST00000290650 PKHD1P08F94 4074 aa2.43□□□□□ -2.02
UBR1-201ENST00000290650 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
UBR1-201ENST00000290650 ALMS1Q8TCU4 4167 aa2.41□□□□□ -2.02
UBR1-201ENST00000290650 FAT1Q14517 4588 aa2.41□□□□□ -2.02
UBR1-201ENST00000290650 DNAH5Q8TE73 4624 aa2.41□□□□□ -2.02
UBR1-201ENST00000290650 KRTAP4-5Q9BYR2 181 aa2.39□□□□□ -2.03
UBR1-201ENST00000290650 DYNC2H1Q8NCM8 4307 aaKnown RBP2.39□□□□□ -2.03
UBR1-201ENST00000290650 UBR4Q5T4S7 5183 aa2.38□□□□□ -2.03
UBR1-201ENST00000290650 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
UBR1-201ENST00000290650 TPRXLQ17RH7 258 aa2.38□□□□□ -2.03
UBR1-201ENST00000290650 LRP1BQ9NZR2 4599 aa2.38□□□□□ -2.03
UBR1-201ENST00000290650 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
UBR1-201ENST00000290650 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
UBR1-201ENST00000290650 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
UBR1-201ENST00000290650 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
UBR1-201ENST00000290650 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
UBR1-201ENST00000290650 KRTAP10-10P60014 251 aa2.34□□□□□ -2.04
UBR1-201ENST00000290650 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
UBR1-201ENST00000290650 TNP1P09430 55 aa2.32□□□□□ -2.04
UBR1-201ENST00000290650 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
UBR1-201ENST00000290650 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
UBR1-201ENST00000290650 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
UBR1-201ENST00000290650 KRTAP10-6P60371 365 aaPredicted RBP2.31□□□□□ -2.04
UBR1-201ENST00000290650 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
UBR1-201ENST00000290650 SACSQ9NZJ4 4579 aa2.28□□□□□ -2.04
UBR1-201ENST00000290650 KRTAP3-3Q9BYR6 98 aa2.28□□□□□ -2.04
UBR1-201ENST00000290650 KRTAP3-2Q9BYR7 98 aa2.27□□□□□ -2.05
UBR1-201ENST00000290650 PKD1P98161 4303 aa2.26□□□□□ -2.05
UBR1-201ENST00000290650 INE1O15225 51 aa2.26□□□□□ -2.05
UBR1-201ENST00000290650 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
UBR1-201ENST00000290650 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
UBR1-201ENST00000290650 LPAP08519 4548 aa2.25□□□□□ -2.05
UBR1-201ENST00000290650 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
UBR1-201ENST00000290650 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
UBR1-201ENST00000290650 KRTAP23-1A1A580 65 aa2.24□□□□□ -2.05
UBR1-201ENST00000290650 USH2AO75445 5202 aa2.23□□□□□ -2.05
UBR1-201ENST00000290650 LORP23490 312 aaPredicted RBP2.23□□□□□ -2.05
UBR1-201ENST00000290650 KRTAP17-1Q9BYP8 105 aa2.21□□□□□ -2.06
UBR1-201ENST00000290650 KRTAP15-1Q3LI76 137 aa2.21□□□□□ -2.06
UBR1-201ENST00000290650 HSPG2P98160 4391 aa2.2□□□□□ -2.06
UBR1-201ENST00000290650 PKHD1L1Q86WI1 4243 aa2.18□□□□□ -2.06
UBR1-201ENST00000290650 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
UBR1-201ENST00000290650 LRP2P98164 4655 aa2.17□□□□□ -2.06
UBR1-201ENST00000290650 TNXBP22105 4242 aa2.15□□□□□ -2.07
UBR1-201ENST00000290650 CRCT1Q9UGL9 99 aa2.05□□□□□ -2.08
UBR1-201ENST00000290650 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
UBR1-201ENST00000290650 KRTAP10-12P60413 245 aa2.02□□□□□ -2.09
UBR1-201ENST00000290650 MT1HP80294 61 aa2□□□□□ -2.09
UBR1-201ENST00000290650 MUC2Q02817 5179 aa1.99□□□□□ -2.09
UBR1-201ENST00000290650 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
UBR1-201ENST00000290650 MT1FP04733 61 aa1.97□□□□□ -2.09
UBR1-201ENST00000290650 MT2AP02795 61 aa1.96□□□□□ -2.1
UBR1-201ENST00000290650 FLGP20930 4061 aaPredicted RBP1.93□□□□□ -2.1
UBR1-201ENST00000290650 SPRR2GQ9BYE4 73 aa1.89□□□□□ -2.11
UBR1-201ENST00000290650 MUC17Q685J3 4493 aa1.88□□□□□ -2.11
UBR1-201ENST00000290650 KRTAP19-1Q8IUB9 90 aa1.88□□□□□ -2.11
UBR1-201ENST00000290650 KRTAP10-7P60409 375 aaPredicted RBP1.87□□□□□ -2.11
UBR1-201ENST00000290650 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
UBR1-201ENST00000290650 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
UBR1-201ENST00000290650 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
UBR1-201ENST00000290650 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
UBR1-201ENST00000290650 LCE2CQ5TA81 110 aa1.85□□□□□ -2.11
UBR1-201ENST00000290650 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.11
UBR1-201ENST00000290650 KRTAP4-8A0A0G2JLE6 195 aa1.83□□□□□ -2.12
UBR1-201ENST00000290650 KRTAP9-8Q9BYQ0 159 aa1.83□□□□□ -2.12
UBR1-201ENST00000290650 KRTAP4-8Q9BYQ9 185 aa1.83□□□□□ -2.12
UBR1-201ENST00000290650 KRTAP10-5P60370 271 aa1.82□□□□□ -2.12
UBR1-201ENST00000290650 MT1XP80297 61 aa1.81□□□□□ -2.12
UBR1-201ENST00000290650 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
UBR1-201ENST00000290650 MT1BP07438 61 aa1.79□□□□□ -2.12
UBR1-201ENST00000290650 KMT2DO14686 5537 aa1.78□□□□□ -2.12
UBR1-201ENST00000290650 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.13
UBR1-201ENST00000290650 LCE3CQ5T5A8 94 aa1.76□□□□□ -2.13
UBR1-201ENST00000290650 KRTAP4-7Q9BYR0 210 aa1.75□□□□□ -2.13
UBR1-201ENST00000290650 KRTAP9-3Q9BYQ3 159 aa1.75□□□□□ -2.13
UBR1-201ENST00000290650 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
UBR1-201ENST00000290650 LCE2BO14633 110 aa1.74□□□□□ -2.13
UBR1-201ENST00000290650 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
UBR1-201ENST00000290650 MT1GP13640 62 aa1.71□□□□□ -2.14
UBR1-201ENST00000290650 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
UBR1-201ENST00000290650 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
UBR1-201ENST00000290650 LCE3BQ5TA77 95 aa1.68□□□□□ -2.14
UBR1-201ENST00000290650 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
UBR1-201ENST00000290650 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms