RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
CACNA1D-201ENST00000288139 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
CACNA1D-201ENST00000288139 XP32Q5T750 250 aa4.31□□□□□ -1.72
CACNA1D-201ENST00000288139 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
CACNA1D-201ENST00000288139 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
CACNA1D-201ENST00000288139 DNAH17Q9UFH2 4485 aa4.28□□□□□ -1.72
CACNA1D-201ENST00000288139 PKHD1P08F94 4074 aa4.27□□□□□ -1.73
CACNA1D-201ENST00000288139 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
CACNA1D-201ENST00000288139 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CACNA1D-201ENST00000288139 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
CACNA1D-201ENST00000288139 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
CACNA1D-201ENST00000288139 INE1O15225 51 aa4.24□□□□□ -1.73
CACNA1D-201ENST00000288139 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
CACNA1D-201ENST00000288139 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CACNA1D-201ENST00000288139 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
CACNA1D-201ENST00000288139 ALMS1Q8TCU4 4167 aa4.19□□□□□ -1.74
CACNA1D-201ENST00000288139 RYR2Q92736 4967 aa4.19□□□□□ -1.74
CACNA1D-201ENST00000288139 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
CACNA1D-201ENST00000288139 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
CACNA1D-201ENST00000288139 HUWE1Q7Z6Z7 4374 aaKnown RBP4.17□□□□□ -1.74
CACNA1D-201ENST00000288139 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.75
CACNA1D-201ENST00000288139 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
CACNA1D-201ENST00000288139 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
CACNA1D-201ENST00000288139 DNAH8Q96JB1 4490 aa4.1□□□□□ -1.75
CACNA1D-201ENST00000288139 RYR3Q15413 4870 aa4.09□□□□□ -1.75
CACNA1D-201ENST00000288139 KRTAP10-6P60371 365 aaPredicted RBP4.06□□□□□ -1.76
CACNA1D-201ENST00000288139 RYR1P21817 5038 aa4.04□□□□□ -1.76
CACNA1D-201ENST00000288139 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.77
CACNA1D-201ENST00000288139 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
CACNA1D-201ENST00000288139 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
CACNA1D-201ENST00000288139 TNXBP22105 4242 aa3.98□□□□□ -1.77
CACNA1D-201ENST00000288139 LRP1BQ9NZR2 4599 aa3.93□□□□□ -1.78
CACNA1D-201ENST00000288139 APOBP04114 4563 aaKnown RBP3.93□□□□□ -1.78
CACNA1D-201ENST00000288139 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
CACNA1D-201ENST00000288139 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
CACNA1D-201ENST00000288139 KRTAP3-2Q9BYR7 98 aa3.89□□□□□ -1.79
CACNA1D-201ENST00000288139 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
CACNA1D-201ENST00000288139 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
CACNA1D-201ENST00000288139 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
CACNA1D-201ENST00000288139 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
CACNA1D-201ENST00000288139 HSPG2P98160 4391 aa3.81□□□□□ -1.8
CACNA1D-201ENST00000288139 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
CACNA1D-201ENST00000288139 MYCBP2O75592 4640 aa3.74□□□□□ -1.81
CACNA1D-201ENST00000288139 DYNC1H1Q14204 4646 aaKnown RBP3.72□□□□□ -1.81
CACNA1D-201ENST00000288139 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
CACNA1D-201ENST00000288139 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
CACNA1D-201ENST00000288139 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
CACNA1D-201ENST00000288139 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
CACNA1D-201ENST00000288139 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
CACNA1D-201ENST00000288139 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
CACNA1D-201ENST00000288139 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.82
CACNA1D-201ENST00000288139 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
CACNA1D-201ENST00000288139 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
CACNA1D-201ENST00000288139 FAT1Q14517 4588 aa3.6□□□□□ -1.83
CACNA1D-201ENST00000288139 MUC2Q02817 5179 aa3.6□□□□□ -1.83
CACNA1D-201ENST00000288139 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
CACNA1D-201ENST00000288139 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
CACNA1D-201ENST00000288139 HERC2O95714 4834 aa3.56□□□□□ -1.84
CACNA1D-201ENST00000288139 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
CACNA1D-201ENST00000288139 LORP23490 312 aaPredicted RBP3.49□□□□□ -1.85
CACNA1D-201ENST00000288139 HERC1Q15751 4861 aa3.46□□□□□ -1.86
CACNA1D-201ENST00000288139 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
CACNA1D-201ENST00000288139 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
CACNA1D-201ENST00000288139 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
CACNA1D-201ENST00000288139 LPAP08519 4548 aa3.38□□□□□ -1.87
CACNA1D-201ENST00000288139 LRP2P98164 4655 aa3.38□□□□□ -1.87
CACNA1D-201ENST00000288139 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
CACNA1D-201ENST00000288139 MT3P25713 68 aa3.37□□□□□ -1.87
CACNA1D-201ENST00000288139 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
CACNA1D-201ENST00000288139 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
CACNA1D-201ENST00000288139 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
CACNA1D-201ENST00000288139 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
CACNA1D-201ENST00000288139 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
CACNA1D-201ENST00000288139 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
CACNA1D-201ENST00000288139 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
CACNA1D-201ENST00000288139 SPRR2EP22531 72 aa3.15□□□□□ -1.91
CACNA1D-201ENST00000288139 SPRR2BP35325 72 aa3.15□□□□□ -1.91
CACNA1D-201ENST00000288139 SPRR2AP35326 72 aa3.15□□□□□ -1.91
CACNA1D-201ENST00000288139 LCE2BO14633 110 aa3.1□□□□□ -1.91
CACNA1D-201ENST00000288139 SPRR2DP22532 72 aa3.09□□□□□ -1.92
CACNA1D-201ENST00000288139 MT2AP02795 61 aa3.08□□□□□ -1.92
CACNA1D-201ENST00000288139 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
CACNA1D-201ENST00000288139 USH2AO75445 5202 aa3.03□□□□□ -1.92
CACNA1D-201ENST00000288139 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.93
CACNA1D-201ENST00000288139 MT1HP80294 61 aa3.02□□□□□ -1.93
CACNA1D-201ENST00000288139 KRTAP4-1Q9BYQ7 146 aa3.01□□□□□ -1.93
CACNA1D-201ENST00000288139 KRTAP19-1Q8IUB9 90 aa3.01□□□□□ -1.93
CACNA1D-201ENST00000288139 KRTAP4-5Q9BYR2 181 aa3.01□□□□□ -1.93
CACNA1D-201ENST00000288139 LCE2CQ5TA81 110 aa2.98□□□□□ -1.93
CACNA1D-201ENST00000288139 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
CACNA1D-201ENST00000288139 MT1FP04733 61 aa2.95□□□□□ -1.94
CACNA1D-201ENST00000288139 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
CACNA1D-201ENST00000288139 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
CACNA1D-201ENST00000288139 MT1XP80297 61 aa2.92□□□□□ -1.94
CACNA1D-201ENST00000288139 MT1GP13640 62 aa2.89□□□□□ -1.95
CACNA1D-201ENST00000288139 LCE2DQ5TA82 110 aaPredicted RBP2.87□□□□□ -1.95
CACNA1D-201ENST00000288139 MT1LQ93083 61 aa2.87□□□□□ -1.95
CACNA1D-201ENST00000288139 MT1BP07438 61 aa2.8□□□□□ -1.96
CACNA1D-201ENST00000288139 MT1EP04732 61 aa2.76□□□□□ -1.97
CACNA1D-201ENST00000288139 KRTAP9-8Q9BYQ0 159 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms