RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.42
SCLT1-201ENST00000281142 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
SCLT1-201ENST00000281142 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
SCLT1-201ENST00000281142 P0C880 135 aa6.16□□□□□ -1.42
SCLT1-201ENST00000281142 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
SCLT1-201ENST00000281142 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.43
SCLT1-201ENST00000281142 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
SCLT1-201ENST00000281142 C9orf92A6NGG3 77 aa6.13□□□□□ -1.43
SCLT1-201ENST00000281142 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
SCLT1-201ENST00000281142 A0A1B0GU33 70 aa6.1□□□□□ -1.43
SCLT1-201ENST00000281142 TNXBP22105 4242 aa6.1□□□□□ -1.43
SCLT1-201ENST00000281142 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
SCLT1-201ENST00000281142 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
SCLT1-201ENST00000281142 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
SCLT1-201ENST00000281142 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
SCLT1-201ENST00000281142 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
SCLT1-201ENST00000281142 DMBT1Q9UGM3 2413 aaPredicted RBP5.97□□□□□ -1.45
SCLT1-201ENST00000281142 K7ERS5 55 aa5.95□□□□□ -1.46
SCLT1-201ENST00000281142 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
SCLT1-201ENST00000281142 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
SCLT1-201ENST00000281142 J3QL48 77 aa5.92□□□□□ -1.46
SCLT1-201ENST00000281142 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
SCLT1-201ENST00000281142 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
SCLT1-201ENST00000281142 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
SCLT1-201ENST00000281142 HERC1Q15751 4861 aa5.9□□□□□ -1.47
SCLT1-201ENST00000281142 A0A0D9SG42 100 aa5.9□□□□□ -1.47
SCLT1-201ENST00000281142 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
SCLT1-201ENST00000281142 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
SCLT1-201ENST00000281142 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
SCLT1-201ENST00000281142 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
SCLT1-201ENST00000281142 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
SCLT1-201ENST00000281142 RPL37P61927 97 aaKnown RBP5.82□□□□□ -1.48
SCLT1-201ENST00000281142 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
SCLT1-201ENST00000281142 LPAP08519 4548 aa5.76□□□□□ -1.49
SCLT1-201ENST00000281142 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
SCLT1-201ENST00000281142 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
SCLT1-201ENST00000281142 S4R3F8 94 aa5.7□□□□□ -1.5
SCLT1-201ENST00000281142 LRP2P98164 4655 aa5.67□□□□□ -1.5
SCLT1-201ENST00000281142 XP32Q5T750 250 aa5.62□□□□□ -1.51
SCLT1-201ENST00000281142 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
SCLT1-201ENST00000281142 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
SCLT1-201ENST00000281142 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
SCLT1-201ENST00000281142 MUC2Q02817 5179 aa5.48□□□□□ -1.53
SCLT1-201ENST00000281142 LUZP6Q538Z0 58 aa5.46□□□□□ -1.53
SCLT1-201ENST00000281142 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
SCLT1-201ENST00000281142 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
SCLT1-201ENST00000281142 M0QZ58 72 aa5.41□□□□□ -1.54
SCLT1-201ENST00000281142 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
SCLT1-201ENST00000281142 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
SCLT1-201ENST00000281142 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.56
SCLT1-201ENST00000281142 R4GN34 69 aa5.32□□□□□ -1.56
SCLT1-201ENST00000281142 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
SCLT1-201ENST00000281142 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
SCLT1-201ENST00000281142 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
SCLT1-201ENST00000281142 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
SCLT1-201ENST00000281142 MT1HP80294 61 aa5.08□□□□□ -1.6
SCLT1-201ENST00000281142 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
SCLT1-201ENST00000281142 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
SCLT1-201ENST00000281142 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
SCLT1-201ENST00000281142 M0R2T5 61 aa4.99□□□□□ -1.61
SCLT1-201ENST00000281142 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
SCLT1-201ENST00000281142 TNP1P09430 55 aa4.88□□□□□ -1.63
SCLT1-201ENST00000281142 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
SCLT1-201ENST00000281142 MT2AP02795 61 aa4.83□□□□□ -1.64
SCLT1-201ENST00000281142 MT1FP04733 61 aa4.8□□□□□ -1.64
SCLT1-201ENST00000281142 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
SCLT1-201ENST00000281142 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
SCLT1-201ENST00000281142 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SCLT1-201ENST00000281142 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
SCLT1-201ENST00000281142 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
SCLT1-201ENST00000281142 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
SCLT1-201ENST00000281142 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
SCLT1-201ENST00000281142 INE1O15225 51 aa4.62□□□□□ -1.67
SCLT1-201ENST00000281142 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
SCLT1-201ENST00000281142 LCE2BO14633 110 aa4.61□□□□□ -1.67
SCLT1-201ENST00000281142 USH2AO75445 5202 aa4.59□□□□□ -1.67
SCLT1-201ENST00000281142 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
SCLT1-201ENST00000281142 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
SCLT1-201ENST00000281142 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
SCLT1-201ENST00000281142 MT1BP07438 61 aa4.49□□□□□ -1.69
SCLT1-201ENST00000281142 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
SCLT1-201ENST00000281142 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
SCLT1-201ENST00000281142 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
SCLT1-201ENST00000281142 MT1XP80297 61 aa4.41□□□□□ -1.7
SCLT1-201ENST00000281142 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
SCLT1-201ENST00000281142 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
SCLT1-201ENST00000281142 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
SCLT1-201ENST00000281142 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
SCLT1-201ENST00000281142 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
SCLT1-201ENST00000281142 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
SCLT1-201ENST00000281142 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
SCLT1-201ENST00000281142 KMT2DO14686 5537 aa4.26□□□□□ -1.73
SCLT1-201ENST00000281142 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
SCLT1-201ENST00000281142 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
SCLT1-201ENST00000281142 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
SCLT1-201ENST00000281142 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
SCLT1-201ENST00000281142 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
SCLT1-201ENST00000281142 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
SCLT1-201ENST00000281142 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
SCLT1-201ENST00000281142 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms