RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
SEC24D-201ENST00000280551 Q8N1X5 172 aa5.61□□□□□ -1.51
SEC24D-201ENST00000280551 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
SEC24D-201ENST00000280551 IGLV7-46A0A075B6I9 117 aa5.6□□□□□ -1.51
SEC24D-201ENST00000280551 A8MUU9 505 aa5.6□□□□□ -1.51
SEC24D-201ENST00000280551 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
SEC24D-201ENST00000280551 HRES1P13985 223 aa5.58□□□□□ -1.52
SEC24D-201ENST00000280551 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
SEC24D-201ENST00000280551 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
SEC24D-201ENST00000280551 HERC2O95714 4834 aa5.54□□□□□ -1.52
SEC24D-201ENST00000280551 ACYP2P14621 99 aa5.53□□□□□ -1.52
SEC24D-201ENST00000280551 A0A0D9SG42 100 aa5.51□□□□□ -1.53
SEC24D-201ENST00000280551 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
SEC24D-201ENST00000280551 LRP2P98164 4655 aa5.48□□□□□ -1.53
SEC24D-201ENST00000280551 J3QL48 77 aa5.47□□□□□ -1.53
SEC24D-201ENST00000280551 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
SEC24D-201ENST00000280551 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
SEC24D-201ENST00000280551 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
SEC24D-201ENST00000280551 P0C880 135 aa5.45□□□□□ -1.54
SEC24D-201ENST00000280551 MUC2Q02817 5179 aa5.43□□□□□ -1.54
SEC24D-201ENST00000280551 XP32Q5T750 250 aa5.4□□□□□ -1.54
SEC24D-201ENST00000280551 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
SEC24D-201ENST00000280551 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
SEC24D-201ENST00000280551 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
SEC24D-201ENST00000280551 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
SEC24D-201ENST00000280551 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
SEC24D-201ENST00000280551 C9orf92A6NGG3 77 aa5.34□□□□□ -1.55
SEC24D-201ENST00000280551 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
SEC24D-201ENST00000280551 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
SEC24D-201ENST00000280551 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
SEC24D-201ENST00000280551 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
SEC24D-201ENST00000280551 A0A1B0GU33 70 aa5.24□□□□□ -1.57
SEC24D-201ENST00000280551 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
SEC24D-201ENST00000280551 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
SEC24D-201ENST00000280551 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
SEC24D-201ENST00000280551 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
SEC24D-201ENST00000280551 HERC1Q15751 4861 aa5.08□□□□□ -1.6
SEC24D-201ENST00000280551 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
SEC24D-201ENST00000280551 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
SEC24D-201ENST00000280551 H0YAA0 97 aa5.04□□□□□ -1.6
SEC24D-201ENST00000280551 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
SEC24D-201ENST00000280551 KRTAP3-2Q9BYR7 98 aa5.01□□□□□ -1.61
SEC24D-201ENST00000280551 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
SEC24D-201ENST00000280551 S4R3F8 94 aa5□□□□□ -1.61
SEC24D-201ENST00000280551 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
SEC24D-201ENST00000280551 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
SEC24D-201ENST00000280551 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SEC24D-201ENST00000280551 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
SEC24D-201ENST00000280551 PLAC4Q8WY50 150 aa4.83□□□□□ -1.64
SEC24D-201ENST00000280551 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
SEC24D-201ENST00000280551 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
SEC24D-201ENST00000280551 M0QZ58 72 aa4.75□□□□□ -1.65
SEC24D-201ENST00000280551 R4GN34 69 aa4.75□□□□□ -1.65
SEC24D-201ENST00000280551 MT1HP80294 61 aa4.68□□□□□ -1.66
SEC24D-201ENST00000280551 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
SEC24D-201ENST00000280551 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
SEC24D-201ENST00000280551 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
SEC24D-201ENST00000280551 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.68
SEC24D-201ENST00000280551 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.68
SEC24D-201ENST00000280551 MT2AP02795 61 aa4.52□□□□□ -1.69
SEC24D-201ENST00000280551 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
SEC24D-201ENST00000280551 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
SEC24D-201ENST00000280551 MT1FP04733 61 aa4.49□□□□□ -1.69
SEC24D-201ENST00000280551 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
SEC24D-201ENST00000280551 USH2AO75445 5202 aa4.43□□□□□ -1.7
SEC24D-201ENST00000280551 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
SEC24D-201ENST00000280551 KMT2DO14686 5537 aa4.4□□□□□ -1.7
SEC24D-201ENST00000280551 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
SEC24D-201ENST00000280551 MT1BP07438 61 aa4.34□□□□□ -1.71
SEC24D-201ENST00000280551 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
SEC24D-201ENST00000280551 M0R2T5 61 aa4.31□□□□□ -1.72
SEC24D-201ENST00000280551 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
SEC24D-201ENST00000280551 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
SEC24D-201ENST00000280551 MT1XP80297 61 aa4.22□□□□□ -1.73
SEC24D-201ENST00000280551 LCE2BO14633 110 aa4.22□□□□□ -1.73
SEC24D-201ENST00000280551 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
SEC24D-201ENST00000280551 TNP1P09430 55 aa4.11□□□□□ -1.75
SEC24D-201ENST00000280551 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.76
SEC24D-201ENST00000280551 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
SEC24D-201ENST00000280551 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
SEC24D-201ENST00000280551 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
SEC24D-201ENST00000280551 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
SEC24D-201ENST00000280551 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
SEC24D-201ENST00000280551 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
SEC24D-201ENST00000280551 INE1O15225 51 aa4.02□□□□□ -1.77
SEC24D-201ENST00000280551 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
SEC24D-201ENST00000280551 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
SEC24D-201ENST00000280551 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
SEC24D-201ENST00000280551 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
SEC24D-201ENST00000280551 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
SEC24D-201ENST00000280551 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
SEC24D-201ENST00000280551 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
SEC24D-201ENST00000280551 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
SEC24D-201ENST00000280551 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
SEC24D-201ENST00000280551 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
SEC24D-201ENST00000280551 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
SEC24D-201ENST00000280551 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
SEC24D-201ENST00000280551 MT1EP04732 61 aa3.69□□□□□ -1.82
SEC24D-201ENST00000280551 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
SEC24D-201ENST00000280551 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms