RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 DSCR10P59022 87 aa5.34□□□□□ -1.55
PDCD4-201ENST00000280154 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.55
PDCD4-201ENST00000280154 SPINK6Q6UWN8 80 aa5.32□□□□□ -1.56
PDCD4-201ENST00000280154 A0A1B0GU33 70 aa5.32□□□□□ -1.56
PDCD4-201ENST00000280154 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
PDCD4-201ENST00000280154 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
PDCD4-201ENST00000280154 Q5VSD8 79 aa5.28□□□□□ -1.56
PDCD4-201ENST00000280154 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
PDCD4-201ENST00000280154 PRLHP81277 87 aa5.24□□□□□ -1.57
PDCD4-201ENST00000280154 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
PDCD4-201ENST00000280154 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
PDCD4-201ENST00000280154 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
PDCD4-201ENST00000280154 KRTAP29-1A8MX34 341 aaPredicted RBP5.22□□□□□ -1.57
PDCD4-201ENST00000280154 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
PDCD4-201ENST00000280154 MYCBP2O75592 4640 aa5.22□□□□□ -1.57
PDCD4-201ENST00000280154 MT1HL1P0DM35 61 aa5.21□□□□□ -1.58
PDCD4-201ENST00000280154 SMR3BP02814 79 aaPredicted RBP5.19□□□□□ -1.58
PDCD4-201ENST00000280154 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
PDCD4-201ENST00000280154 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
PDCD4-201ENST00000280154 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.58
PDCD4-201ENST00000280154 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
PDCD4-201ENST00000280154 IGFL1Q6UW32 110 aa5.13□□□□□ -1.59
PDCD4-201ENST00000280154 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
PDCD4-201ENST00000280154 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
PDCD4-201ENST00000280154 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
PDCD4-201ENST00000280154 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
PDCD4-201ENST00000280154 A0A0D9SG42 100 aa5.05□□□□□ -1.6
PDCD4-201ENST00000280154 H0YAA0 97 aa5.05□□□□□ -1.6
PDCD4-201ENST00000280154 LCE2BO14633 110 aa5.01□□□□□ -1.61
PDCD4-201ENST00000280154 ANAPC11Q9NYG5 84 aa5.01□□□□□ -1.61
PDCD4-201ENST00000280154 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
PDCD4-201ENST00000280154 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
PDCD4-201ENST00000280154 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
PDCD4-201ENST00000280154 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.62
PDCD4-201ENST00000280154 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
PDCD4-201ENST00000280154 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.62
PDCD4-201ENST00000280154 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
PDCD4-201ENST00000280154 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
PDCD4-201ENST00000280154 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
PDCD4-201ENST00000280154 XP32Q5T750 250 aa4.85□□□□□ -1.63
PDCD4-201ENST00000280154 HERC1Q15751 4861 aa4.83□□□□□ -1.64
PDCD4-201ENST00000280154 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
PDCD4-201ENST00000280154 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
PDCD4-201ENST00000280154 LPAP08519 4548 aa4.78□□□□□ -1.64
PDCD4-201ENST00000280154 LRP2P98164 4655 aa4.7□□□□□ -1.66
PDCD4-201ENST00000280154 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
PDCD4-201ENST00000280154 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
PDCD4-201ENST00000280154 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
PDCD4-201ENST00000280154 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
PDCD4-201ENST00000280154 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
PDCD4-201ENST00000280154 INE1O15225 51 aa4.59□□□□□ -1.67
PDCD4-201ENST00000280154 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
PDCD4-201ENST00000280154 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
PDCD4-201ENST00000280154 LORP23490 312 aaPredicted RBP4.54□□□□□ -1.68
PDCD4-201ENST00000280154 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
PDCD4-201ENST00000280154 S4R3F8 94 aa4.51□□□□□ -1.69
PDCD4-201ENST00000280154 MUC2Q02817 5179 aa4.39□□□□□ -1.71
PDCD4-201ENST00000280154 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
PDCD4-201ENST00000280154 MT1HP80294 61 aa4.37□□□□□ -1.71
PDCD4-201ENST00000280154 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
PDCD4-201ENST00000280154 KRTAP13-4Q3LI77 160 aa4.34□□□□□ -1.71
PDCD4-201ENST00000280154 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
PDCD4-201ENST00000280154 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
PDCD4-201ENST00000280154 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
PDCD4-201ENST00000280154 MT2AP02795 61 aa4.14□□□□□ -1.75
PDCD4-201ENST00000280154 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
PDCD4-201ENST00000280154 MT1FP04733 61 aa4.09□□□□□ -1.75
PDCD4-201ENST00000280154 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
PDCD4-201ENST00000280154 M0R2T5 61 aa4.04□□□□□ -1.76
PDCD4-201ENST00000280154 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
PDCD4-201ENST00000280154 KRTAP19-1Q8IUB9 90 aa4.03□□□□□ -1.76
PDCD4-201ENST00000280154 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
PDCD4-201ENST00000280154 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
PDCD4-201ENST00000280154 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
PDCD4-201ENST00000280154 MT1BP07438 61 aa3.91□□□□□ -1.78
PDCD4-201ENST00000280154 M0QZ58 72 aa3.9□□□□□ -1.78
PDCD4-201ENST00000280154 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
PDCD4-201ENST00000280154 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
PDCD4-201ENST00000280154 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
PDCD4-201ENST00000280154 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
PDCD4-201ENST00000280154 USH2AO75445 5202 aa3.85□□□□□ -1.79
PDCD4-201ENST00000280154 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
PDCD4-201ENST00000280154 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
PDCD4-201ENST00000280154 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
PDCD4-201ENST00000280154 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
PDCD4-201ENST00000280154 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
PDCD4-201ENST00000280154 MT1XP80297 61 aa3.73□□□□□ -1.81
PDCD4-201ENST00000280154 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
PDCD4-201ENST00000280154 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.81
PDCD4-201ENST00000280154 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
PDCD4-201ENST00000280154 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
PDCD4-201ENST00000280154 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
PDCD4-201ENST00000280154 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
PDCD4-201ENST00000280154 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
PDCD4-201ENST00000280154 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
PDCD4-201ENST00000280154 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
PDCD4-201ENST00000280154 TNP1P09430 55 aa3.63□□□□□ -1.83
PDCD4-201ENST00000280154 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
PDCD4-201ENST00000280154 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.83
PDCD4-201ENST00000280154 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms