RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
SLC13A3-201ENST00000279027 KRTAP10-8P60410 259 aa6.2□□□□□ -1.42
SLC13A3-201ENST00000279027 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
SLC13A3-201ENST00000279027 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
SLC13A3-201ENST00000279027 H0YAA0 97 aa6.16□□□□□ -1.42
SLC13A3-201ENST00000279027 KIAA1109Q2LD37 5005 aa6.16□□□□□ -1.42
SLC13A3-201ENST00000279027 RYR2Q92736 4967 aa6.11□□□□□ -1.43
SLC13A3-201ENST00000279027 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
SLC13A3-201ENST00000279027 RYR1P21817 5038 aa6.09□□□□□ -1.43
SLC13A3-201ENST00000279027 RYR3Q15413 4870 aa6.09□□□□□ -1.43
SLC13A3-201ENST00000279027 P0C880 135 aa6.03□□□□□ -1.44
SLC13A3-201ENST00000279027 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
SLC13A3-201ENST00000279027 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
SLC13A3-201ENST00000279027 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
SLC13A3-201ENST00000279027 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
SLC13A3-201ENST00000279027 M0QZ58 72 aa5.95□□□□□ -1.46
SLC13A3-201ENST00000279027 HSPG2P98160 4391 aa5.94□□□□□ -1.46
SLC13A3-201ENST00000279027 R4GN34 69 aa5.94□□□□□ -1.46
SLC13A3-201ENST00000279027 ROMO1P60602 79 aa5.93□□□□□ -1.46
SLC13A3-201ENST00000279027 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
SLC13A3-201ENST00000279027 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
SLC13A3-201ENST00000279027 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
SLC13A3-201ENST00000279027 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.47
SLC13A3-201ENST00000279027 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.47
SLC13A3-201ENST00000279027 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
SLC13A3-201ENST00000279027 LRP2P98164 4655 aa5.88□□□□□ -1.47
SLC13A3-201ENST00000279027 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
SLC13A3-201ENST00000279027 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
SLC13A3-201ENST00000279027 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
SLC13A3-201ENST00000279027 LPAP08519 4548 aa5.8□□□□□ -1.48
SLC13A3-201ENST00000279027 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
SLC13A3-201ENST00000279027 TNXBP22105 4242 aa5.79□□□□□ -1.48
SLC13A3-201ENST00000279027 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.48
SLC13A3-201ENST00000279027 M0R2T5 61 aa5.75□□□□□ -1.49
SLC13A3-201ENST00000279027 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
SLC13A3-201ENST00000279027 HERC2O95714 4834 aa5.67□□□□□ -1.5
SLC13A3-201ENST00000279027 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
SLC13A3-201ENST00000279027 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
SLC13A3-201ENST00000279027 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
SLC13A3-201ENST00000279027 H3BS24 57 aa5.58□□□□□ -1.52
SLC13A3-201ENST00000279027 MUC2Q02817 5179 aa5.5□□□□□ -1.53
SLC13A3-201ENST00000279027 NDUFAF8A1L188 74 aa5.45□□□□□ -1.54
SLC13A3-201ENST00000279027 PLAC4Q8WY50 150 aa5.4□□□□□ -1.55
SLC13A3-201ENST00000279027 HERC1Q15751 4861 aa5.39□□□□□ -1.55
SLC13A3-201ENST00000279027 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
SLC13A3-201ENST00000279027 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
SLC13A3-201ENST00000279027 TNP1P09430 55 aa5.32□□□□□ -1.56
SLC13A3-201ENST00000279027 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
SLC13A3-201ENST00000279027 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
SLC13A3-201ENST00000279027 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
SLC13A3-201ENST00000279027 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
SLC13A3-201ENST00000279027 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
SLC13A3-201ENST00000279027 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
SLC13A3-201ENST00000279027 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
SLC13A3-201ENST00000279027 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
SLC13A3-201ENST00000279027 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
SLC13A3-201ENST00000279027 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
SLC13A3-201ENST00000279027 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
SLC13A3-201ENST00000279027 MT1HP80294 61 aa5.08□□□□□ -1.6
SLC13A3-201ENST00000279027 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
SLC13A3-201ENST00000279027 MT1FP04733 61 aa5.01□□□□□ -1.61
SLC13A3-201ENST00000279027 MT2AP02795 61 aa5□□□□□ -1.61
SLC13A3-201ENST00000279027 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.61
SLC13A3-201ENST00000279027 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
SLC13A3-201ENST00000279027 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
SLC13A3-201ENST00000279027 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
SLC13A3-201ENST00000279027 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
SLC13A3-201ENST00000279027 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
SLC13A3-201ENST00000279027 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
SLC13A3-201ENST00000279027 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
SLC13A3-201ENST00000279027 MT1BP07438 61 aa4.72□□□□□ -1.65
SLC13A3-201ENST00000279027 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
SLC13A3-201ENST00000279027 USH2AO75445 5202 aa4.69□□□□□ -1.66
SLC13A3-201ENST00000279027 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
SLC13A3-201ENST00000279027 MT1XP80297 61 aa4.69□□□□□ -1.66
SLC13A3-201ENST00000279027 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
SLC13A3-201ENST00000279027 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
SLC13A3-201ENST00000279027 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
SLC13A3-201ENST00000279027 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
SLC13A3-201ENST00000279027 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
SLC13A3-201ENST00000279027 KMT2DO14686 5537 aa4.56□□□□□ -1.68
SLC13A3-201ENST00000279027 LCE2BO14633 110 aa4.55□□□□□ -1.68
SLC13A3-201ENST00000279027 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
SLC13A3-201ENST00000279027 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
SLC13A3-201ENST00000279027 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
SLC13A3-201ENST00000279027 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SLC13A3-201ENST00000279027 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
SLC13A3-201ENST00000279027 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
SLC13A3-201ENST00000279027 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
SLC13A3-201ENST00000279027 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
SLC13A3-201ENST00000279027 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
SLC13A3-201ENST00000279027 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
SLC13A3-201ENST00000279027 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
SLC13A3-201ENST00000279027 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
SLC13A3-201ENST00000279027 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
SLC13A3-201ENST00000279027 INE1O15225 51 aa4.09□□□□□ -1.75
SLC13A3-201ENST00000279027 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
SLC13A3-201ENST00000279027 MT1EP04732 61 aa4.07□□□□□ -1.76
SLC13A3-201ENST00000279027 MT1LQ93083 61 aa4.07□□□□□ -1.76
SLC13A3-201ENST00000279027 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms