RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SACSQ9NZJ4 4579 aa6.69□□□□□ -1.34
HERC6-202ENST00000273960 Q5VSD8 79 aa6.69□□□□□ -1.34
HERC6-202ENST00000273960 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
HERC6-202ENST00000273960 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
HERC6-202ENST00000273960 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
HERC6-202ENST00000273960 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
HERC6-202ENST00000273960 S4R3F8 94 aa6.61□□□□□ -1.35
HERC6-202ENST00000273960 PKD1P98161 4303 aa6.61□□□□□ -1.35
HERC6-202ENST00000273960 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
HERC6-202ENST00000273960 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
HERC6-202ENST00000273960 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
HERC6-202ENST00000273960 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
HERC6-202ENST00000273960 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
HERC6-202ENST00000273960 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
HERC6-202ENST00000273960 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
HERC6-202ENST00000273960 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
HERC6-202ENST00000273960 RYR2Q92736 4967 aa6.52□□□□□ -1.37
HERC6-202ENST00000273960 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
HERC6-202ENST00000273960 RYR3Q15413 4870 aa6.45□□□□□ -1.38
HERC6-202ENST00000273960 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
HERC6-202ENST00000273960 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
HERC6-202ENST00000273960 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
HERC6-202ENST00000273960 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
HERC6-202ENST00000273960 RYR1P21817 5038 aa6.39□□□□□ -1.39
HERC6-202ENST00000273960 HSPG2P98160 4391 aa6.38□□□□□ -1.39
HERC6-202ENST00000273960 J3QL48 77 aa6.35□□□□□ -1.39
HERC6-202ENST00000273960 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
HERC6-202ENST00000273960 XP32Q5T750 250 aa6.31□□□□□ -1.4
HERC6-202ENST00000273960 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
HERC6-202ENST00000273960 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
HERC6-202ENST00000273960 M0QZ58 72 aa6.29□□□□□ -1.4
HERC6-202ENST00000273960 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
HERC6-202ENST00000273960 LPAP08519 4548 aa6.24□□□□□ -1.41
HERC6-202ENST00000273960 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
HERC6-202ENST00000273960 R4GN34 69 aa6.2□□□□□ -1.42
HERC6-202ENST00000273960 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
HERC6-202ENST00000273960 LRP2P98164 4655 aa6.16□□□□□ -1.42
HERC6-202ENST00000273960 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
HERC6-202ENST00000273960 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
HERC6-202ENST00000273960 TNXBP22105 4242 aa6.05□□□□□ -1.44
HERC6-202ENST00000273960 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
HERC6-202ENST00000273960 HERC2O95714 4834 aa6.02□□□□□ -1.45
HERC6-202ENST00000273960 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
HERC6-202ENST00000273960 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
HERC6-202ENST00000273960 MUC2Q02817 5179 aa5.9□□□□□ -1.46
HERC6-202ENST00000273960 HERC1Q15751 4861 aa5.82□□□□□ -1.48
HERC6-202ENST00000273960 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
HERC6-202ENST00000273960 M0R2T5 61 aa5.78□□□□□ -1.48
HERC6-202ENST00000273960 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
HERC6-202ENST00000273960 BIRC6Q9NR09 4857 aa5.73□□□□□ -1.49
HERC6-202ENST00000273960 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
HERC6-202ENST00000273960 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
HERC6-202ENST00000273960 TNP1P09430 55 aa5.66□□□□□ -1.5
HERC6-202ENST00000273960 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
HERC6-202ENST00000273960 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
HERC6-202ENST00000273960 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
HERC6-202ENST00000273960 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
HERC6-202ENST00000273960 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
HERC6-202ENST00000273960 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
HERC6-202ENST00000273960 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.55
HERC6-202ENST00000273960 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
HERC6-202ENST00000273960 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
HERC6-202ENST00000273960 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
HERC6-202ENST00000273960 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
HERC6-202ENST00000273960 MT1HP80294 61 aa5.24□□□□□ -1.57
HERC6-202ENST00000273960 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
HERC6-202ENST00000273960 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
HERC6-202ENST00000273960 MT1FP04733 61 aa5.16□□□□□ -1.58
HERC6-202ENST00000273960 INE1O15225 51 aa5.16□□□□□ -1.58
HERC6-202ENST00000273960 MT2AP02795 61 aa5.14□□□□□ -1.59
HERC6-202ENST00000273960 LCE2BO14633 110 aa5.13□□□□□ -1.59
HERC6-202ENST00000273960 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
HERC6-202ENST00000273960 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
HERC6-202ENST00000273960 USH2AO75445 5202 aa5.03□□□□□ -1.6
HERC6-202ENST00000273960 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
HERC6-202ENST00000273960 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
HERC6-202ENST00000273960 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
HERC6-202ENST00000273960 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
HERC6-202ENST00000273960 KMT2DO14686 5537 aa4.94□□□□□ -1.62
HERC6-202ENST00000273960 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
HERC6-202ENST00000273960 MT1BP07438 61 aa4.85□□□□□ -1.63
HERC6-202ENST00000273960 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
HERC6-202ENST00000273960 MT1XP80297 61 aa4.84□□□□□ -1.64
HERC6-202ENST00000273960 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
HERC6-202ENST00000273960 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
HERC6-202ENST00000273960 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
HERC6-202ENST00000273960 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.65
HERC6-202ENST00000273960 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
HERC6-202ENST00000273960 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
HERC6-202ENST00000273960 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
HERC6-202ENST00000273960 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
HERC6-202ENST00000273960 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
HERC6-202ENST00000273960 KRTAP4-8Q9BYQ9 185 aa4.64□□□□□ -1.67
HERC6-202ENST00000273960 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
HERC6-202ENST00000273960 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
HERC6-202ENST00000273960 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
HERC6-202ENST00000273960 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
HERC6-202ENST00000273960 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
HERC6-202ENST00000273960 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
HERC6-202ENST00000273960 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms