RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 Q8N9L7 120 aa3.99□□□□□ -1.77
TPM3-201ENST00000271850 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
TPM3-201ENST00000271850 Q5VV11 94 aa3.98□□□□□ -1.77
TPM3-201ENST00000271850 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
TPM3-201ENST00000271850 HCG22E2RYF7 251 aa3.95□□□□□ -1.78
TPM3-201ENST00000271850 BPY2O14599 106 aa3.95□□□□□ -1.78
TPM3-201ENST00000271850 LCA10Q71F78 164 aa3.95□□□□□ -1.78
TPM3-201ENST00000271850 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
TPM3-201ENST00000271850 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
TPM3-201ENST00000271850 M0R143 59 aa3.94□□□□□ -1.78
TPM3-201ENST00000271850 MT3P25713 68 aa3.94□□□□□ -1.78
TPM3-201ENST00000271850 CASC2Q6XLA1 102 aa3.93□□□□□ -1.78
TPM3-201ENST00000271850 S4R3F8 94 aa3.92□□□□□ -1.78
TPM3-201ENST00000271850 H3BT86 120 aa3.9□□□□□ -1.79
TPM3-201ENST00000271850 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
TPM3-201ENST00000271850 A0A087WVE0 104 aa3.89□□□□□ -1.79
TPM3-201ENST00000271850 CXCL6P80162 114 aa3.89□□□□□ -1.79
TPM3-201ENST00000271850 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
TPM3-201ENST00000271850 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
TPM3-201ENST00000271850 TAX1BP3O14907 124 aa3.88□□□□□ -1.79
TPM3-201ENST00000271850 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
TPM3-201ENST00000271850 BATFQ16520 125 aa3.86□□□□□ -1.79
TPM3-201ENST00000271850 LOC105371267A0A1B0GV96 52 aa3.82□□□□□ -1.8
TPM3-201ENST00000271850 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
TPM3-201ENST00000271850 SMIM6P0DI80 62 aa3.82□□□□□ -1.8
TPM3-201ENST00000271850 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
TPM3-201ENST00000271850 TSTD3H0UI37 97 aa3.81□□□□□ -1.8
TPM3-201ENST00000271850 PRO0461Q9UI25 63 aa3.81□□□□□ -1.8
TPM3-201ENST00000271850 MT1XP80297 61 aa3.8□□□□□ -1.8
TPM3-201ENST00000271850 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
TPM3-201ENST00000271850 SPRR2EP22531 72 aa3.77□□□□□ -1.81
TPM3-201ENST00000271850 SPRR2BP35325 72 aa3.77□□□□□ -1.81
TPM3-201ENST00000271850 SPRR2AP35326 72 aa3.77□□□□□ -1.81
TPM3-201ENST00000271850 CYP4F30PQ9H0H9 118 aa3.77□□□□□ -1.81
TPM3-201ENST00000271850 CRIPTQ9P021 101 aa3.77□□□□□ -1.81
TPM3-201ENST00000271850 SPCS1Q9Y6A9 102 aa3.77□□□□□ -1.81
TPM3-201ENST00000271850 UBL5Q9BZL1 73 aa3.76□□□□□ -1.81
TPM3-201ENST00000271850 IMUPQ9GZP8 106 aa3.76□□□□□ -1.81
TPM3-201ENST00000271850 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
TPM3-201ENST00000271850 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
TPM3-201ENST00000271850 K7EP34 96 aa3.74□□□□□ -1.81
TPM3-201ENST00000271850 SEC61GP60059 68 aa3.74□□□□□ -1.81
TPM3-201ENST00000271850 PCP4L1A6NKN8 68 aa3.73□□□□□ -1.81
TPM3-201ENST00000271850 H0YAA0 97 aa3.73□□□□□ -1.81
TPM3-201ENST00000271850 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
TPM3-201ENST00000271850 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
TPM3-201ENST00000271850 TRAV22A0A0B4J277 110 aa3.69□□□□□ -1.82
TPM3-201ENST00000271850 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
TPM3-201ENST00000271850 ADM2Q7Z4H4 148 aa3.68□□□□□ -1.82
TPM3-201ENST00000271850 LOC101927531A0A1B0GV80 90 aa3.67□□□□□ -1.82
TPM3-201ENST00000271850 A8MUN3 132 aa3.67□□□□□ -1.82
TPM3-201ENST00000271850 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
TPM3-201ENST00000271850 NDUFC1O43677 76 aa3.65□□□□□ -1.83
TPM3-201ENST00000271850 P0C880 135 aa3.64□□□□□ -1.83
TPM3-201ENST00000271850 SPRR2DP22532 72 aa3.64□□□□□ -1.83
TPM3-201ENST00000271850 ETDBQ3ZM63 59 aa3.63□□□□□ -1.83
TPM3-201ENST00000271850 COL5A1-AS1Q5SY13 56 aa3.62□□□□□ -1.83
TPM3-201ENST00000271850 H0Y9P7 68 aa3.6□□□□□ -1.83
TPM3-201ENST00000271850 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
TPM3-201ENST00000271850 UQCRQO14949 82 aa3.58□□□□□ -1.84
TPM3-201ENST00000271850 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
TPM3-201ENST00000271850 F8W1H4 67 aa3.57□□□□□ -1.84
TPM3-201ENST00000271850 ACYP1P07311 99 aa3.57□□□□□ -1.84
TPM3-201ENST00000271850 R4GN34 69 aa3.56□□□□□ -1.84
TPM3-201ENST00000271850 M0QZ58 72 aa3.55□□□□□ -1.84
TPM3-201ENST00000271850 ATOX1O00244 68 aa3.55□□□□□ -1.84
TPM3-201ENST00000271850 GTF2H5Q6ZYL4 71 aa3.53□□□□□ -1.84
TPM3-201ENST00000271850 LINC00208Q96KT6 92 aa3.53□□□□□ -1.84
TPM3-201ENST00000271850 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
TPM3-201ENST00000271850 HIST1H4AP62805 103 aaKnown RBP3.52□□□□□ -1.85
TPM3-201ENST00000271850 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
TPM3-201ENST00000271850 ATP5EP2Q5VTU8 51 aa3.51□□□□□ -1.85
TPM3-201ENST00000271850 OCR1Q9BZK8 76 aa3.51□□□□□ -1.85
TPM3-201ENST00000271850 FAM240AA0A1B0GVK7 77 aa3.5□□□□□ -1.85
TPM3-201ENST00000271850 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
TPM3-201ENST00000271850 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
TPM3-201ENST00000271850 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
TPM3-201ENST00000271850 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
TPM3-201ENST00000271850 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
TPM3-201ENST00000271850 MP68P56378 58 aa3.42□□□□□ -1.86
TPM3-201ENST00000271850 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
TPM3-201ENST00000271850 A0A1B0GV90 55 aa3.41□□□□□ -1.86
TPM3-201ENST00000271850 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
TPM3-201ENST00000271850 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
TPM3-201ENST00000271850 H3BPC8 53 aa3.37□□□□□ -1.87
TPM3-201ENST00000271850 MT1EP04732 61 aa3.37□□□□□ -1.87
TPM3-201ENST00000271850 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
TPM3-201ENST00000271850 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
TPM3-201ENST00000271850 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
TPM3-201ENST00000271850 V9GYY9 64 aa3.35□□□□□ -1.87
TPM3-201ENST00000271850 TRAV7A0A075B6U4 112 aa3.34□□□□□ -1.87
TPM3-201ENST00000271850 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
TPM3-201ENST00000271850 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TPM3-201ENST00000271850 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
TPM3-201ENST00000271850 ACYP2P14621 99 aa3.28□□□□□ -1.88
TPM3-201ENST00000271850 CYSTM1Q9H1C7 97 aa3.25□□□□□ -1.89
TPM3-201ENST00000271850 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
TPM3-201ENST00000271850 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
TPM3-201ENST00000271850 MT4P47944 62 aa3.23□□□□□ -1.89
TPM3-201ENST00000271850 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms