RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 FAT1Q14517 4588 aa9.05□□□□□ -0.96
LRRC56-201ENST00000270115 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
LRRC56-201ENST00000270115 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
LRRC56-201ENST00000270115 NDUFAF8A1L188 74 aa9.01□□□□□ -0.97
LRRC56-201ENST00000270115 KRTAP10-6P60371 365 aaPredicted RBP8.98□□□□□ -0.97
LRRC56-201ENST00000270115 RYR3Q15413 4870 aa8.98□□□□□ -0.97
LRRC56-201ENST00000270115 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
LRRC56-201ENST00000270115 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
LRRC56-201ENST00000270115 A0A1B0GVY2 172 aa8.93□□□□□ -0.98
LRRC56-201ENST00000270115 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.98
LRRC56-201ENST00000270115 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
LRRC56-201ENST00000270115 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
LRRC56-201ENST00000270115 S4R3F8 94 aa8.81□□□□□ -1
LRRC56-201ENST00000270115 KRTAP12-2P59991 146 aa8.79□□□□□ -1
LRRC56-201ENST00000270115 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
LRRC56-201ENST00000270115 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
LRRC56-201ENST00000270115 HSPG2P98160 4391 aa8.7□□□□□ -1.02
LRRC56-201ENST00000270115 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
LRRC56-201ENST00000270115 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
LRRC56-201ENST00000270115 EPPK1P58107 5090 aaKnown RBP8.68□□□□□ -1.02
LRRC56-201ENST00000270115 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
LRRC56-201ENST00000270115 LUZP6Q538Z0 58 aa8.67□□□□□ -1.02
LRRC56-201ENST00000270115 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
LRRC56-201ENST00000270115 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
LRRC56-201ENST00000270115 RYR1P21817 5038 aa8.59□□□□□ -1.03
LRRC56-201ENST00000270115 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
LRRC56-201ENST00000270115 Q5VSD8 79 aa8.57□□□□□ -1.04
LRRC56-201ENST00000270115 XP32Q5T750 250 aa8.56□□□□□ -1.04
LRRC56-201ENST00000270115 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
LRRC56-201ENST00000270115 TNXBP22105 4242 aa8.5□□□□□ -1.05
LRRC56-201ENST00000270115 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
LRRC56-201ENST00000270115 M0QZ58 72 aa8.35□□□□□ -1.07
LRRC56-201ENST00000270115 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
LRRC56-201ENST00000270115 LPAP08519 4548 aa8.3□□□□□ -1.08
LRRC56-201ENST00000270115 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
LRRC56-201ENST00000270115 J3QL48 77 aa8.28□□□□□ -1.08
LRRC56-201ENST00000270115 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
LRRC56-201ENST00000270115 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
LRRC56-201ENST00000270115 R4GN34 69 aa8.17□□□□□ -1.1
LRRC56-201ENST00000270115 LRP2P98164 4655 aa8.14□□□□□ -1.11
LRRC56-201ENST00000270115 HERC2O95714 4834 aa8.1□□□□□ -1.11
LRRC56-201ENST00000270115 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
LRRC56-201ENST00000270115 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
LRRC56-201ENST00000270115 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
LRRC56-201ENST00000270115 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
LRRC56-201ENST00000270115 HERC1Q15751 4861 aa7.85□□□□□ -1.15
LRRC56-201ENST00000270115 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
LRRC56-201ENST00000270115 MUC2Q02817 5179 aa7.78□□□□□ -1.16
LRRC56-201ENST00000270115 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
LRRC56-201ENST00000270115 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
LRRC56-201ENST00000270115 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
LRRC56-201ENST00000270115 TNP1P09430 55 aa7.54□□□□□ -1.2
LRRC56-201ENST00000270115 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
LRRC56-201ENST00000270115 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
LRRC56-201ENST00000270115 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
LRRC56-201ENST00000270115 KRTAP19-2Q3LHN2 52 aa7.41□□□□□ -1.22
LRRC56-201ENST00000270115 FAT4Q6V0I7 4981 aa7.4□□□□□ -1.22
LRRC56-201ENST00000270115 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
LRRC56-201ENST00000270115 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
LRRC56-201ENST00000270115 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
LRRC56-201ENST00000270115 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
LRRC56-201ENST00000270115 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
LRRC56-201ENST00000270115 INE1O15225 51 aa7.02□□□□□ -1.29
LRRC56-201ENST00000270115 M0R2T5 61 aa7□□□□□ -1.29
LRRC56-201ENST00000270115 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
LRRC56-201ENST00000270115 MT1HP80294 61 aa6.93□□□□□ -1.3
LRRC56-201ENST00000270115 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
LRRC56-201ENST00000270115 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
LRRC56-201ENST00000270115 MT1FP04733 61 aa6.74□□□□□ -1.33
LRRC56-201ENST00000270115 MT2AP02795 61 aa6.73□□□□□ -1.33
LRRC56-201ENST00000270115 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
LRRC56-201ENST00000270115 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
LRRC56-201ENST00000270115 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
LRRC56-201ENST00000270115 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
LRRC56-201ENST00000270115 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
LRRC56-201ENST00000270115 MT1XP80297 61 aa6.58□□□□□ -1.36
LRRC56-201ENST00000270115 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
LRRC56-201ENST00000270115 USH2AO75445 5202 aa6.52□□□□□ -1.37
LRRC56-201ENST00000270115 MT1BP07438 61 aa6.49□□□□□ -1.37
LRRC56-201ENST00000270115 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
LRRC56-201ENST00000270115 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
LRRC56-201ENST00000270115 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
LRRC56-201ENST00000270115 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
LRRC56-201ENST00000270115 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
LRRC56-201ENST00000270115 LCE2BO14633 110 aa6.29□□□□□ -1.4
LRRC56-201ENST00000270115 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
LRRC56-201ENST00000270115 KMT2DO14686 5537 aa6.25□□□□□ -1.41
LRRC56-201ENST00000270115 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
LRRC56-201ENST00000270115 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
LRRC56-201ENST00000270115 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
LRRC56-201ENST00000270115 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
LRRC56-201ENST00000270115 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
LRRC56-201ENST00000270115 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
LRRC56-201ENST00000270115 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
LRRC56-201ENST00000270115 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
LRRC56-201ENST00000270115 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
LRRC56-201ENST00000270115 MT1LQ93083 61 aa5.72□□□□□ -1.49
LRRC56-201ENST00000270115 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
LRRC56-201ENST00000270115 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
LRRC56-201ENST00000270115 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms