RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 CRIPTQ9P021 101 aa11.49□□□□□ -0.57
CDR2-201ENST00000268383 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
CDR2-201ENST00000268383 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
CDR2-201ENST00000268383 KRTAP25-1Q3LHN0 102 aa11.38□□□□□ -0.59
CDR2-201ENST00000268383 KRTAP10-6P60371 365 aaPredicted RBP11.36□□□□□ -0.59
CDR2-201ENST00000268383 KRTAP13-4Q3LI77 160 aa11.35□□□□□ -0.59
CDR2-201ENST00000268383 A0A0D9SG42 100 aa11.34□□□□□ -0.59
CDR2-201ENST00000268383 LPAP08519 4548 aa11.34□□□□□ -0.59
CDR2-201ENST00000268383 Q5VSD8 79 aa11.33□□□□□ -0.6
CDR2-201ENST00000268383 XP32Q5T750 250 aa11.32□□□□□ -0.6
CDR2-201ENST00000268383 RPL37P61927 97 aaKnown RBP11.32□□□□□ -0.6
CDR2-201ENST00000268383 KRTAP17-1Q9BYP8 105 aa11.31□□□□□ -0.6
CDR2-201ENST00000268383 RYR3Q15413 4870 aa11.3□□□□□ -0.6
CDR2-201ENST00000268383 RYR1P21817 5038 aa11.26□□□□□ -0.61
CDR2-201ENST00000268383 K7ERS5 55 aa11.26□□□□□ -0.61
CDR2-201ENST00000268383 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
CDR2-201ENST00000268383 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
CDR2-201ENST00000268383 S4R3F8 94 aa11.22□□□□□ -0.61
CDR2-201ENST00000268383 P0C880 135 aa11.21□□□□□ -0.62
CDR2-201ENST00000268383 H3BS24 57 aa11.2□□□□□ -0.62
CDR2-201ENST00000268383 LRP2P98164 4655 aa11.18□□□□□ -0.62
CDR2-201ENST00000268383 ROMO1P60602 79 aa11.12□□□□□ -0.63
CDR2-201ENST00000268383 MT1HL1P0DM35 61 aa11.04□□□□□ -0.64
CDR2-201ENST00000268383 C10orf95Q9H7T3 257 aa10.98□□□□□ -0.65
CDR2-201ENST00000268383 ABCA13Q86UQ4 5058 aa10.97□□□□□ -0.65
CDR2-201ENST00000268383 KRTAP12-2P59991 146 aa10.97□□□□□ -0.65
CDR2-201ENST00000268383 TPRXLQ17RH7 258 aa10.96□□□□□ -0.66
CDR2-201ENST00000268383 EPPK1P58107 5090 aaKnown RBP10.9□□□□□ -0.66
CDR2-201ENST00000268383 SPINT4Q6UDR6 99 aa10.89□□□□□ -0.67
CDR2-201ENST00000268383 KRTAP12-1P59990 96 aa10.81□□□□□ -0.68
CDR2-201ENST00000268383 KRTAP4-5Q9BYR2 181 aa10.66□□□□□ -0.7
CDR2-201ENST00000268383 M0QZ58 72 aa10.58□□□□□ -0.72
CDR2-201ENST00000268383 MUC17Q685J3 4493 aa10.53□□□□□ -0.72
CDR2-201ENST00000268383 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
CDR2-201ENST00000268383 R4GN34 69 aa10.46□□□□□ -0.73
CDR2-201ENST00000268383 KRTAP4-1Q9BYQ7 146 aa10.44□□□□□ -0.74
CDR2-201ENST00000268383 KRTAP15-1Q3LI76 137 aa10.43□□□□□ -0.74
CDR2-201ENST00000268383 NDUFAF8A1L188 74 aa10.42□□□□□ -0.74
CDR2-201ENST00000268383 MUC2Q02817 5179 aa10.39□□□□□ -0.75
CDR2-201ENST00000268383 BIRC6Q9NR09 4857 aa10.34□□□□□ -0.75
CDR2-201ENST00000268383 SEC61BP60468 96 aaKnown RBP10.29□□□□□ -0.76
CDR2-201ENST00000268383 HERC2O95714 4834 aa10.28□□□□□ -0.76
CDR2-201ENST00000268383 J3QL48 77 aa10.16□□□□□ -0.78
CDR2-201ENST00000268383 KRTAP19-2Q3LHN2 52 aa10.14□□□□□ -0.79
CDR2-201ENST00000268383 FLGP20930 4061 aaPredicted RBP9.99□□□□□ -0.81
CDR2-201ENST00000268383 CAMK2N1Q7Z7J9 78 aa9.97□□□□□ -0.81
CDR2-201ENST00000268383 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
CDR2-201ENST00000268383 HERC1Q15751 4861 aa9.92□□□□□ -0.82
CDR2-201ENST00000268383 PLAC4Q8WY50 150 aa9.91□□□□□ -0.82
CDR2-201ENST00000268383 FAT4Q6V0I7 4981 aa9.86□□□□□ -0.83
CDR2-201ENST00000268383 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
CDR2-201ENST00000268383 PP632Q6XCG6 107 aa9.62□□□□□ -0.87
CDR2-201ENST00000268383 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
CDR2-201ENST00000268383 TNP1P09430 55 aa9.52□□□□□ -0.89
CDR2-201ENST00000268383 LCE2CQ5TA81 110 aa9.5□□□□□ -0.89
CDR2-201ENST00000268383 LUZP6Q538Z0 58 aa9.47□□□□□ -0.89
CDR2-201ENST00000268383 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
CDR2-201ENST00000268383 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
CDR2-201ENST00000268383 M0R2T5 61 aa9.36□□□□□ -0.91
CDR2-201ENST00000268383 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
CDR2-201ENST00000268383 MT1HP80294 61 aa9.23□□□□□ -0.93
CDR2-201ENST00000268383 KRTAP23-1A1A580 65 aa9.18□□□□□ -0.94
CDR2-201ENST00000268383 MT1FP04733 61 aa9.18□□□□□ -0.94
CDR2-201ENST00000268383 KRTAP10-10P60014 251 aa9.16□□□□□ -0.94
CDR2-201ENST00000268383 LCE3AQ5TA76 89 aa9.14□□□□□ -0.95
CDR2-201ENST00000268383 MT2AP02795 61 aa9.12□□□□□ -0.95
CDR2-201ENST00000268383 A0A0A0MQY5 61 aa9.1□□□□□ -0.95
CDR2-201ENST00000268383 SPRR5A0A1B0GTR4 108 aa9.09□□□□□ -0.95
CDR2-201ENST00000268383 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
CDR2-201ENST00000268383 MT1BP07438 61 aa8.86□□□□□ -0.99
CDR2-201ENST00000268383 KRTAP10-5P60370 271 aa8.84□□□□□ -0.99
CDR2-201ENST00000268383 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
CDR2-201ENST00000268383 MT1XP80297 61 aa8.83□□□□□ -1
CDR2-201ENST00000268383 KRTAP8-1Q8IUC2 63 aa8.74□□□□□ -1.01
CDR2-201ENST00000268383 KRTAP10-7P60409 375 aaPredicted RBP8.68□□□□□ -1.02
CDR2-201ENST00000268383 KRTAP10-12P60413 245 aa8.66□□□□□ -1.02
CDR2-201ENST00000268383 KRTAP12-3P60328 96 aa8.63□□□□□ -1.03
CDR2-201ENST00000268383 KRTAP9-3Q9BYQ3 159 aa8.62□□□□□ -1.03
CDR2-201ENST00000268383 USH2AO75445 5202 aa8.62□□□□□ -1.03
CDR2-201ENST00000268383 KMT2DO14686 5537 aa8.56□□□□□ -1.04
CDR2-201ENST00000268383 LCE2BO14633 110 aa8.35□□□□□ -1.07
CDR2-201ENST00000268383 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
CDR2-201ENST00000268383 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
CDR2-201ENST00000268383 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
CDR2-201ENST00000268383 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.1
CDR2-201ENST00000268383 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
CDR2-201ENST00000268383 LCE3CQ5T5A8 94 aa8.1□□□□□ -1.11
CDR2-201ENST00000268383 INE1O15225 51 aa8.08□□□□□ -1.12
CDR2-201ENST00000268383 KRTAP9-6A8MVA2 160 aa7.98□□□□□ -1.13
CDR2-201ENST00000268383 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
CDR2-201ENST00000268383 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
CDR2-201ENST00000268383 FSIP2Q5CZC0 6907 aa7.8□□□□□ -1.16
CDR2-201ENST00000268383 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
CDR2-201ENST00000268383 MT1LQ93083 61 aa7.62□□□□□ -1.19
CDR2-201ENST00000268383 MT1EP04732 61 aa7.59□□□□□ -1.19
CDR2-201ENST00000268383 KRTAP2-3P0C7H8 128 aa7.54□□□□□ -1.2
CDR2-201ENST00000268383 KRTAP2-4Q9BYR9 128 aa7.54□□□□□ -1.2
CDR2-201ENST00000268383 KRTAP2-1Q9BYU5 128 aa7.54□□□□□ -1.2
CDR2-201ENST00000268383 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
CDR2-201ENST00000268383 MUC12Q9UKN1 5478 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms