RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
TCTN3-201ENST00000265993 LPAP08519 4548 aa5.73□□□□□ -1.49
TCTN3-201ENST00000265993 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
TCTN3-201ENST00000265993 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
TCTN3-201ENST00000265993 KRTAP10-8P60410 259 aa5.7□□□□□ -1.5
TCTN3-201ENST00000265993 H0YAA0 97 aa5.68□□□□□ -1.5
TCTN3-201ENST00000265993 LRP2P98164 4655 aa5.68□□□□□ -1.5
TCTN3-201ENST00000265993 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
TCTN3-201ENST00000265993 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.51
TCTN3-201ENST00000265993 XP32Q5T750 250 aa5.63□□□□□ -1.51
TCTN3-201ENST00000265993 A0A1B0GU33 70 aa5.62□□□□□ -1.51
TCTN3-201ENST00000265993 RPL37P61927 97 aaKnown RBP5.61□□□□□ -1.51
TCTN3-201ENST00000265993 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
TCTN3-201ENST00000265993 MT1HL1P0DM35 61 aa5.59□□□□□ -1.52
TCTN3-201ENST00000265993 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
TCTN3-201ENST00000265993 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
TCTN3-201ENST00000265993 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
TCTN3-201ENST00000265993 S4R3F8 94 aa5.49□□□□□ -1.53
TCTN3-201ENST00000265993 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
TCTN3-201ENST00000265993 A0A0D9SG42 100 aa5.47□□□□□ -1.53
TCTN3-201ENST00000265993 P0C880 135 aa5.46□□□□□ -1.54
TCTN3-201ENST00000265993 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
TCTN3-201ENST00000265993 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
TCTN3-201ENST00000265993 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
TCTN3-201ENST00000265993 MUC2Q02817 5179 aa5.37□□□□□ -1.55
TCTN3-201ENST00000265993 K7ERS5 55 aa5.37□□□□□ -1.55
TCTN3-201ENST00000265993 HERC2O95714 4834 aa5.36□□□□□ -1.55
TCTN3-201ENST00000265993 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
TCTN3-201ENST00000265993 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
TCTN3-201ENST00000265993 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
TCTN3-201ENST00000265993 ROMO1P60602 79 aa5.27□□□□□ -1.57
TCTN3-201ENST00000265993 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
TCTN3-201ENST00000265993 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
TCTN3-201ENST00000265993 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
TCTN3-201ENST00000265993 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
TCTN3-201ENST00000265993 KRTAP12-1P59990 96 aa5.22□□□□□ -1.57
TCTN3-201ENST00000265993 J3QL48 77 aa5.2□□□□□ -1.58
TCTN3-201ENST00000265993 HERC1Q15751 4861 aa5.2□□□□□ -1.58
TCTN3-201ENST00000265993 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
TCTN3-201ENST00000265993 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
TCTN3-201ENST00000265993 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
TCTN3-201ENST00000265993 M0QZ58 72 aa5.16□□□□□ -1.58
TCTN3-201ENST00000265993 R4GN34 69 aa5.12□□□□□ -1.59
TCTN3-201ENST00000265993 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
TCTN3-201ENST00000265993 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
TCTN3-201ENST00000265993 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
TCTN3-201ENST00000265993 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
TCTN3-201ENST00000265993 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
TCTN3-201ENST00000265993 H3BS24 57 aa4.96□□□□□ -1.61
TCTN3-201ENST00000265993 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
TCTN3-201ENST00000265993 LCE2BO14633 110 aa4.93□□□□□ -1.62
TCTN3-201ENST00000265993 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
TCTN3-201ENST00000265993 CAMK2N1Q7Z7J9 78 aa4.86□□□□□ -1.63
TCTN3-201ENST00000265993 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
TCTN3-201ENST00000265993 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
TCTN3-201ENST00000265993 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
TCTN3-201ENST00000265993 M0R2T5 61 aa4.74□□□□□ -1.65
TCTN3-201ENST00000265993 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
TCTN3-201ENST00000265993 MT1HP80294 61 aa4.68□□□□□ -1.66
TCTN3-201ENST00000265993 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
TCTN3-201ENST00000265993 TNP1P09430 55 aa4.62□□□□□ -1.67
TCTN3-201ENST00000265993 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
TCTN3-201ENST00000265993 MT1FP04733 61 aa4.62□□□□□ -1.67
TCTN3-201ENST00000265993 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
TCTN3-201ENST00000265993 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
TCTN3-201ENST00000265993 MT2AP02795 61 aa4.59□□□□□ -1.67
TCTN3-201ENST00000265993 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
TCTN3-201ENST00000265993 USH2AO75445 5202 aa4.48□□□□□ -1.69
TCTN3-201ENST00000265993 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
TCTN3-201ENST00000265993 MT1BP07438 61 aa4.43□□□□□ -1.7
TCTN3-201ENST00000265993 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
TCTN3-201ENST00000265993 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
TCTN3-201ENST00000265993 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.7
TCTN3-201ENST00000265993 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
TCTN3-201ENST00000265993 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
TCTN3-201ENST00000265993 MT1XP80297 61 aa4.38□□□□□ -1.71
TCTN3-201ENST00000265993 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
TCTN3-201ENST00000265993 KMT2DO14686 5537 aa4.37□□□□□ -1.71
TCTN3-201ENST00000265993 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
TCTN3-201ENST00000265993 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
TCTN3-201ENST00000265993 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
TCTN3-201ENST00000265993 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
TCTN3-201ENST00000265993 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
TCTN3-201ENST00000265993 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
TCTN3-201ENST00000265993 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
TCTN3-201ENST00000265993 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
TCTN3-201ENST00000265993 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
TCTN3-201ENST00000265993 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
TCTN3-201ENST00000265993 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
TCTN3-201ENST00000265993 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
TCTN3-201ENST00000265993 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
TCTN3-201ENST00000265993 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
TCTN3-201ENST00000265993 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
TCTN3-201ENST00000265993 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
TCTN3-201ENST00000265993 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
TCTN3-201ENST00000265993 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
TCTN3-201ENST00000265993 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
TCTN3-201ENST00000265993 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
TCTN3-201ENST00000265993 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
TCTN3-201ENST00000265993 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms